Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_02s0025g00580.t01
CDS Infomation

cds chromosome:12X:2:670366:672560:-1 gene:VIT_02s0025g00580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAAGGGAAGAACAATCTGCAGACCATTCTCTTGATTTCTCTTGCTATGTCTGCAACT
CTCTGCAATTCGCTTCCTCTTTCAACGAGGGGAAGATGGATAGTGGATAACGCGGCTGGG
GGTCGCGTGAAGATGGCCTGTGTTAATTGGGTTTCTCACTTGGAGCCTCTGGTCACAGAG
GGCATTCACGCCCAGCCCGTAGAACGCATTGCTGAGACGGTGAAAGCAATGGGGTTCAAC
TGCATCCGGCTCACATATGCGACCTTCATGTGGACGAGGGCCGACTATAACAACAGGACT
GTGGCACAGTCTCTTGATTCCTTCAACCTCACCCAAGCCAAGGAAGGAATAGCTCGAAAC
AATCCTAAGCTGTTGAATCTCCAGATAATCGACGCCTATGAAGCTGTGGTCAATGAGCTT
GGCGCACATGGGCTCATGCTTGTGCTTGATAACCATGTCAGCAAGCCCTTGTGGTGCTGC
GCCAGAGAGGACGGAAACGGGTTCTTTGGAGACATGTACTTCGACCCCAAGGAGTGGATC
AAGGGCTTAACCGACGTCTCCACCCGGTTCAAGAACAATCCTCAGGTGGTGGCTCTGAGT
ATGAGAAATGAGATGCGAGGAGCACGTTCTAACGTGCCGGATTGGTATCGGTACATGCGA
AAAGGAGCAAAAGCCATCCACAAGGCCAACCCAAAGGTCCTGGTGATAGTTTCAGGGTTG
AATTTCGACAAGGATCTTAGCTTCCTGGGGCGCAAGTCATTCGGGTTTACGCTAAACAAC
AAGGTGGTGTTTGAGGCACATTGGTATACGTTTGACTTCACCCAGCAGTGGCAGCAGCTT
CCACCGAACCGGGCTTGCCGCCAGCGGGCAGATGAGTTCCAGAGGGACGCAGCCTTTCTG
ACCACCGGAGACAAGGCAGCTCCTCTTTTTATCAGCGAGTATGGCATTAACTTACAAGAG
ACCAGCCAGGTTGATAGCCGATACTTCACCTGCTTCCTGCCCACTGTTGCTGAGAAGGAC
TTGGATTGGGCTCTGTGGACTCTGCAAGCCAGCTACCATTACAGACAAGGGCATGCTGGG
GGTGGAGAATCCTATTCTGTGCTGGATTACAGCTGGAGCAAGCCACGGTATCCACAATTT
CTAGAGAGAATGGTCATTCTCCAAAACTTGCTCCAAGATCCAAACTCAAATGTTTCACCA
TACTACCTACTCGTCCATGCACAGAGTGGGTTTTGTGTGAATGTGAAACATAACGATGTG
GTTTCTGTAAGTAGTTGCAGGAAGAATAGTAGGAATAGCAGATGGAACCATGAAGGAGAT
AGATCACCCATCAAGAAGTTGGGCCGTAAGCACTGCCTCAAGGCTGTTGGTGATGGGGTT
CCTCTCACTCTCTCTGATGACTGCTCCAGCCCAAGAGCTACCTGGCAATTGGTTTCAGAC
TCGATGCTCCAAATCGCTGCCATGGATGAACAAGGGAACCCACTGTGCCTAGATGCCACG
CCCTCATCAAACTCTACTCCTATTTTGACCAGGGCTTGTGCCTGTCTAAACAATGAGGCT
GGTTGTGATCCTCTCAGCCAGTGGTTCAAGCTTGTTCCTTCAAATATAGCTTAA

Peptide Sequence

PEP ID

VIT_02s0025g00580.t01
PEP Infomation

pep chromosome:12X:2:670366:672560:-1 gene:VIT_02s0025g00580 transcript:VIT_02s0025g00580.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKGKNNLQTILLISLAMSATLCNSLPLSTRGRWIVDNAAGGRVKMACVNWVSHLEPLVTE
GIHAQPVERIAETVKAMGFNCIRLTYATFMWTRADYNNRTVAQSLDSFNLTQAKEGIARN
NPKLLNLQIIDAYEAVVNELGAHGLMLVLDNHVSKPLWCCAREDGNGFFGDMYFDPKEWI
KGLTDVSTRFKNNPQVVALSMRNEMRGARSNVPDWYRYMRKGAKAIHKANPKVLVIVSGL
NFDKDLSFLGRKSFGFTLNNKVVFEAHWYTFDFTQQWQQLPPNRACRQRADEFQRDAAFL
TTGDKAAPLFISEYGINLQETSQVDSRYFTCFLPTVAEKDLDWALWTLQASYHYRQGHAG
GGESYSVLDYSWSKPRYPQFLERMVILQNLLQDPNSNVSPYYLLVHAQSGFCVNVKHNDV
VSVSSCRKNSRNSRWNHEGDRSPIKKLGRKHCLKAVGDGVPLTLSDDCSSPRATWQLVSD
SMLQIAAMDEQGNPLCLDATPSSNSTPILTRACACLNNEAGCDPLSQWFKLVPSNIA

Transcript Sequence

Transcript ID

VIT_02s0025g00580.t01
Transcript Infomation

cdna chromosome:12X:2:670366:672560:-1 gene:VIT_02s0025g00580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAAGGGAAGAACAATCTGCAGACCATTCTCTTGATTTCTCTTGCTATGTCTGCAACT
CTCTGCAATTCGCTTCCTCTTTCAACGAGGGGAAGATGGATAGTGGATAACGCGGCTGGG
GGTCGCGTGAAGATGGCCTGTGTTAATTGGGTTTCTCACTTGGAGCCTCTGGTCACAGAG
GGCATTCACGCCCAGCCCGTAGAACGCATTGCTGAGACGGTGAAAGCAATGGGGTTCAAC
TGCATCCGGCTCACATATGCGACCTTCATGTGGACGAGGGCCGACTATAACAACAGGACT
GTGGCACAGTCTCTTGATTCCTTCAACCTCACCCAAGCCAAGGAAGGAATAGCTCGAAAC
AATCCTAAGCTGTTGAATCTCCAGATAATCGACGCCTATGAAGCTGTGGTCAATGAGCTT
GGCGCACATGGGCTCATGCTTGTGCTTGATAACCATGTCAGCAAGCCCTTGTGGTGCTGC
GCCAGAGAGGACGGAAACGGGTTCTTTGGAGACATGTACTTCGACCCCAAGGAGTGGATC
AAGGGCTTAACCGACGTCTCCACCCGGTTCAAGAACAATCCTCAGGTGGTGGCTCTGAGT
ATGAGAAATGAGATGCGAGGAGCACGTTCTAACGTGCCGGATTGGTATCGGTACATGCGA
AAAGGAGCAAAAGCCATCCACAAGGCCAACCCAAAGGTCCTGGTGATAGTTTCAGGGTTG
AATTTCGACAAGGATCTTAGCTTCCTGGGGCGCAAGTCATTCGGGTTTACGCTAAACAAC
AAGGTGGTGTTTGAGGCACATTGGTATACGTTTGACTTCACCCAGCAGTGGCAGCAGCTT
CCACCGAACCGGGCTTGCCGCCAGCGGGCAGATGAGTTCCAGAGGGACGCAGCCTTTCTG
ACCACCGGAGACAAGGCAGCTCCTCTTTTTATCAGCGAGTATGGCATTAACTTACAAGAG
ACCAGCCAGGTTGATAGCCGATACTTCACCTGCTTCCTGCCCACTGTTGCTGAGAAGGAC
TTGGATTGGGCTCTGTGGACTCTGCAAGCCAGCTACCATTACAGACAAGGGCATGCTGGG
GGTGGAGAATCCTATTCTGTGCTGGATTACAGCTGGAGCAAGCCACGGTATCCACAATTT
CTAGAGAGAATGGTCATTCTCCAAAACTTGCTCCAAGATCCAAACTCAAATGTTTCACCA
TACTACCTACTCGTCCATGCACAGAGTGGGTTTTGTGTGAATGTGAAACATAACGATGTG
GTTTCTGTAAGTAGTTGCAGGAAGAATAGTAGGAATAGCAGATGGAACCATGAAGGAGAT
AGATCACCCATCAAGAAGTTGGGCCGTAAGCACTGCCTCAAGGCTGTTGGTGATGGGGTT
CCTCTCACTCTCTCTGATGACTGCTCCAGCCCAAGAGCTACCTGGCAATTGGTTTCAGAC
TCGATGCTCCAAATCGCTGCCATGGATGAACAAGGGAACCCACTGTGCCTAGATGCCACG
CCCTCATCAAACTCTACTCCTATTTTGACCAGGGCTTGTGCCTGTCTAAACAATGAGGCT
GGTTGTGATCCTCTCAGCCAGTGGTTCAAGCTTGTTCCTTCAAATATAGCTTAA