Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_02s0025g00570.t01
CDS Infomation

cds chromosome:12X:2:666668:669028:-1 gene:VIT_02s0025g00570 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGATGATCAGAGGGACAACTCTGAAGACCTTTCTGCTAATTTCTCTTTCTGTGGTG
GCAACGTTATCAGTATGTGAATCACTGCCTCTATCCACGAAGGGAAGATGGATAGTGGAC
GATGTGACTGGGCGGCGCGTGAAGCTGAAGTGTGTGAATTGGATTTCACACACAGAGAGT
ATGATAACCGAGGGGCTTCACTCTCAGCCAATAGGAGACATTGCTGATAAAATCAGTGAA
ATGGGTTTCAACTGTGTTCGTCTCACCTACCCTACTTTTTTGTGGACGAGGGTGGATTAT
TACAACAAGACTGTTGCGGAGTCTCTTGATTCTCTCAATGCGACTGAGGCCAAGGCCATG
ATCGCTGTTCAGAATCCTCGGTTCTTGAGTCTTCCCCTCAGGGAATCGTATGAACGGGTG
GTTGGGGAGCTTGGGAGACGTGGGCTCATGCTTATACTTGATAACCATGTCAGCAAGCCA
ATGTGGTGCTGCGAAAGAGAGGATGGGAATGGGTTTTTCGGGGACAAGTTTTTCGACCCC
GAGGAGTGGATTGAGGGCTTGTCACAAGTCGCCAACAGATTCAAGGACGAATCCCATGTG
ATCGGAATGAGCATGAGGAATGAGCTTAGAGGCCAGCGTTCAAACCAGAAGGACTGGTAC
AAATACATGAGGGAAGGAGCCAAGGCTATTCACAGCATCAATCCAAACCTTCTTGTGGTC
GTTTCAGGCTTGAATTTTGACAATGATCTCAGCTTCTTGAAGAAAAAGCCTTTCAGGTTA
ACGCTAAATAACAAGGTGGTGTTTGAGGCACATTGGTACTCGTTCGACGCCACCGAGCAG
TGGAATGACAAGCCGCCGGAGCAGGAGTGCAAAGACCGAGCACGAGAGTTCTATAGAGAC
GCAGGTTTCCTTACAGAGGGAGATAACCCTGCTCCTTTGTTTATAAGTGAGTTTGGTATG
GATTTAAGAATGGGCAATGTGGTTGATAACCGATACTTCAACTGCTACCTCCCCACTGTT
GCTGCTAAGGACCTCGACTGGGCGCTGTGGACTTTGCAAGCTAGTTATTACTACAGGCAG
GGGAGCCTCTTCCTCGAAGAGGTTTACTCAGTGCTTGATTTCAACTGGGAGAAGCCTCGG
AATCCACAATTCTTAGAGAAATTAACCATTCTCCAAGAAATGTTACAAGATCCAAACTCA
GAGGCTTCACCATACTACGTAATTGTCCATGCAAAGAGTGGCTTATGTGTGAACGTAGAC
GGTGAGAAAAAGGTTCATGGAAGTGGCTGCCGGCACCGGACAAAATGGACCCACTCCGGA
GATGGATGGCCTATTGAGTTGATGGGAAGTAACCTATGTCTGAAGGCTGTTGGTGATGGG
CGGCCAGTGAAGGTCTCTACTGATTGTCGGAGCCAACAGTCTAGATGGAGAAGGGTTTCG
AAAGAGAAGCTCCATTTGGCTGTGAGAGATGAACATGACCACACCGAGTCGCTGTGCCTG
GACGCCTCAAGTTCAGACCCTTCTTCAATTGTAACCAGGAAATGTGCTTGTAAGGAAGGT
GATCTCAATTGCCACCATGAGGAGCAAAGCAATTGGTTTCAGCTTGTCCCTTCAAATATA
CCCTAG

Peptide Sequence

PEP ID

VIT_02s0025g00570.t01
PEP Infomation

pep chromosome:12X:2:666668:669028:-1 gene:VIT_02s0025g00570 transcript:VIT_02s0025g00570.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEMIRGTTLKTFLLISLSVVATLSVCESLPLSTKGRWIVDDVTGRRVKLKCVNWISHTES
MITEGLHSQPIGDIADKISEMGFNCVRLTYPTFLWTRVDYYNKTVAESLDSLNATEAKAM
IAVQNPRFLSLPLRESYERVVGELGRRGLMLILDNHVSKPMWCCEREDGNGFFGDKFFDP
EEWIEGLSQVANRFKDESHVIGMSMRNELRGQRSNQKDWYKYMREGAKAIHSINPNLLVV
VSGLNFDNDLSFLKKKPFRLTLNNKVVFEAHWYSFDATEQWNDKPPEQECKDRAREFYRD
AGFLTEGDNPAPLFISEFGMDLRMGNVVDNRYFNCYLPTVAAKDLDWALWTLQASYYYRQ
GSLFLEEVYSVLDFNWEKPRNPQFLEKLTILQEMLQDPNSEASPYYVIVHAKSGLCVNVD
GEKKVHGSGCRHRTKWTHSGDGWPIELMGSNLCLKAVGDGRPVKVSTDCRSQQSRWRRVS
KEKLHLAVRDEHDHTESLCLDASSSDPSSIVTRKCACKEGDLNCHHEEQSNWFQLVPSNI
P

Transcript Sequence

Transcript ID

VIT_02s0025g00570.t01
Transcript Infomation

cdna chromosome:12X:2:666668:669028:-1 gene:VIT_02s0025g00570 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGATGATCAGAGGGACAACTCTGAAGACCTTTCTGCTAATTTCTCTTTCTGTGGTG
GCAACGTTATCAGTATGTGAATCACTGCCTCTATCCACGAAGGGAAGATGGATAGTGGAC
GATGTGACTGGGCGGCGCGTGAAGCTGAAGTGTGTGAATTGGATTTCACACACAGAGAGT
ATGATAACCGAGGGGCTTCACTCTCAGCCAATAGGAGACATTGCTGATAAAATCAGTGAA
ATGGGTTTCAACTGTGTTCGTCTCACCTACCCTACTTTTTTGTGGACGAGGGTGGATTAT
TACAACAAGACTGTTGCGGAGTCTCTTGATTCTCTCAATGCGACTGAGGCCAAGGCCATG
ATCGCTGTTCAGAATCCTCGGTTCTTGAGTCTTCCCCTCAGGGAATCGTATGAACGGGTG
GTTGGGGAGCTTGGGAGACGTGGGCTCATGCTTATACTTGATAACCATGTCAGCAAGCCA
ATGTGGTGCTGCGAAAGAGAGGATGGGAATGGGTTTTTCGGGGACAAGTTTTTCGACCCC
GAGGAGTGGATTGAGGGCTTGTCACAAGTCGCCAACAGATTCAAGGACGAATCCCATGTG
ATCGGAATGAGCATGAGGAATGAGCTTAGAGGCCAGCGTTCAAACCAGAAGGACTGGTAC
AAATACATGAGGGAAGGAGCCAAGGCTATTCACAGCATCAATCCAAACCTTCTTGTGGTC
GTTTCAGGCTTGAATTTTGACAATGATCTCAGCTTCTTGAAGAAAAAGCCTTTCAGGTTA
ACGCTAAATAACAAGGTGGTGTTTGAGGCACATTGGTACTCGTTCGACGCCACCGAGCAG
TGGAATGACAAGCCGCCGGAGCAGGAGTGCAAAGACCGAGCACGAGAGTTCTATAGAGAC
GCAGGTTTCCTTACAGAGGGAGATAACCCTGCTCCTTTGTTTATAAGTGAGTTTGGTATG
GATTTAAGAATGGGCAATGTGGTTGATAACCGATACTTCAACTGCTACCTCCCCACTGTT
GCTGCTAAGGACCTCGACTGGGCGCTGTGGACTTTGCAAGCTAGTTATTACTACAGGCAG
GGGAGCCTCTTCCTCGAAGAGGTTTACTCAGTGCTTGATTTCAACTGGGAGAAGCCTCGG
AATCCACAATTCTTAGAGAAATTAACCATTCTCCAAGAAATGTTACAAGATCCAAACTCA
GAGGCTTCACCATACTACGTAATTGTCCATGCAAAGAGTGGCTTATGTGTGAACGTAGAC
GGTGAGAAAAAGGTTCATGGAAGTGGCTGCCGGCACCGGACAAAATGGACCCACTCCGGA
GATGGATGGCCTATTGAGTTGATGGGAAGTAACCTATGTCTGAAGGCTGTTGGTGATGGG
CGGCCAGTGAAGGTCTCTACTGATTGTCGGAGCCAACAGTCTAGATGGAGAAGGGTTTCG
AAAGAGAAGCTCCATTTGGCTGTGAGAGATGAACATGACCACACCGAGTCGCTGTGCCTG
GACGCCTCAAGTTCAGACCCTTCTTCAATTGTAACCAGGAAATGTGCTTGTAAGGAAGGT
GATCTCAATTGCCACCATGAGGAGCAAAGCAATTGGTTTCAGCTTGTCCCTTCAAATATA
CCCTAG