Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_02s0012g02660.t01
CDS Infomation

cds chromosome:12X:2:10269951:10293929:-1 gene:VIT_02s0012g02660 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCGCTTTGCAATACCTGGAATCACTGCGCGCGGCCCATCCGGAGCTGGCAGAATGG
TACAACTCTCTTGCAGATCTGTACCAGAGGAAGCTCTGGCACCAACTCACTCTCAAACTC
GAACAGTTCGTCGCTCTTGCAGTCTTTCAGGCGGGTGATGCTCTCATTCAGTTATATCAT
AATTTTATCACTGACTTTGAGACTAAGATCAATCTTCTCAAGCTCGCACATTTTGCTGTC
ATAGTTTCTAGGCAGTATACAGAGAAAGAAGCTGCTGTACGTTACCTTGAAGGGGTAATT
GAAAAGCTTCGAGGTACTAGAGAGTTACGTATAGAGGAGCCCATTCTATACATAAAGATG
CAAATAGCTGTTTTCAATCTTGAGAAGGGGGACCAAAAAGAGTGCAAGAAACTTTTAGAA
GATGGGAAGAGTACACTTGACAGTATGACTGACATTGATCCTTCTGTATATGCCAGCTAT
TATTGGGTTTCATCTCAGTATTATAAATCTCGTCAAGAATTCGCAGAATTCTATAAAAGT
GCTCTTCTATATCTGGCATACACATCAGTGGAGTCTCTCTCTGAAACATTTAAGCTGGAT
TTGGCATTTGATTTATCGCTTTCTGCGCTGCTGGGAGATAATATCTATAACTTTGGAGAA
CTGCTTGCTCATCCAATTATAAAAAGTCTTCTGGGGACAAAGGTTGAGTGGCTTTACTAT
ATACTCCAGGCATTCAACTCTGGTGATTTAGTCCGCTATCAAGAATTATGCCGTGTCCAT
AATGCTGCTCTGAGTGCTCAACCGGCATTAGTTCAGAATGAGAAGAAGCTACTGGAAAAG
ATTAACATTCTCTGCTTGATGGAAATCATCTTCAGCCGTCCTTCAGAAGATCGTACTATT
CCCTTGAACATCATTGCAGAACGCACCAAACTTTCTGTGGAGGATGTGGAGTATCTTCTC
ATGAAGAGCCTTTCTGTTCATCTTATTGAGGGCATCATTGATCAAGTTGAAGGGACAGTT
CATGTGTCGTGGGTGCAGCCAAGAGTTTTGGGTATTCCACAGATCAAATCGTTGCGCGAC
CGACTTGACAATTGGGTGGACAAAGTGCACACTGCTTTGCTCTCTGTGGAGGCAGAAACA
CCTGATCTAGTTGCATCATGA

Peptide Sequence

PEP ID

VIT_02s0012g02660.t01
PEP Infomation

pep chromosome:12X:2:10269951:10293929:-1 gene:VIT_02s0012g02660 transcript:VIT_02s0012g02660.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAALQYLESLRAAHPELAEWYNSLADLYQRKLWHQLTLKLEQFVALAVFQAGDALIQLYH
NFITDFETKINLLKLAHFAVIVSRQYTEKEAAVRYLEGVIEKLRGTRELRIEEPILYIKM
QIAVFNLEKGDQKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQYYKSRQEFAEFYKS
ALLYLAYTSVESLSETFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYY
ILQAFNSGDLVRYQELCRVHNAALSAQPALVQNEKKLLEKINILCLMEIIFSRPSEDRTI
PLNIIAERTKLSVEDVEYLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRD
RLDNWVDKVHTALLSVEAETPDLVAS

Transcript Sequence

Transcript ID

VIT_02s0012g02660.t01
Transcript Infomation

cdna chromosome:12X:2:10269951:10293929:-1 gene:VIT_02s0012g02660 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATTTAAATAGAGAGAGGGTCGAAAAAGGGTCTCACAGATTTATTCAATCGCCATGGCCGC
TTTGCAATACCTGGAATCACTGCGCGCGGCCCATCCGGAGCTGGCAGAATGGTACAACTC
TCTTGCAGATCTGTACCAGAGGAAGCTCTGGCACCAACTCACTCTCAAACTCGAACAGTT
CGTCGCTCTTGCAGTCTTTCAGGCGGGTGATGCTCTCATTCAGTTATATCATAATTTTAT
CACTGACTTTGAGACTAAGATCAATCTTCTCAAGCTCGCACATTTTGCTGTCATAGTTTC
TAGGCAGTATACAGAGAAAGAAGCTGCTGTACGTTACCTTGAAGGGGTAATTGAAAAGCT
TCGAGGTACTAGAGAGTTACGTATAGAGGAGCCCATTCTATACATAAAGATGCAAATAGC
TGTTTTCAATCTTGAGAAGGGGGACCAAAAAGAGTGCAAGAAACTTTTAGAAGATGGGAA
GAGTACACTTGACAGTATGACTGACATTGATCCTTCTGTATATGCCAGCTATTATTGGGT
TTCATCTCAGTATTATAAATCTCGTCAAGAATTCGCAGAATTCTATAAAAGTGCTCTTCT
ATATCTGGCATACACATCAGTGGAGTCTCTCTCTGAAACATTTAAGCTGGATTTGGCATT
TGATTTATCGCTTTCTGCGCTGCTGGGAGATAATATCTATAACTTTGGAGAACTGCTTGC
TCATCCAATTATAAAAAGTCTTCTGGGGACAAAGGTTGAGTGGCTTTACTATATACTCCA
GGCATTCAACTCTGGTGATTTAGTCCGCTATCAAGAATTATGCCGTGTCCATAATGCTGC
TCTGAGTGCTCAACCGGCATTAGTTCAGAATGAGAAGAAGCTACTGGAAAAGATTAACAT
TCTCTGCTTGATGGAAATCATCTTCAGCCGTCCTTCAGAAGATCGTACTATTCCCTTGAA
CATCATTGCAGAACGCACCAAACTTTCTGTGGAGGATGTGGAGTATCTTCTCATGAAGAG
CCTTTCTGTTCATCTTATTGAGGGCATCATTGATCAAGTTGAAGGGACAGTTCATGTGTC
GTGGGTGCAGCCAAGAGTTTTGGGTATTCCACAGATCAAATCGTTGCGCGACCGACTTGA
CAATTGGGTGGACAAAGTGCACACTGCTTTGCTCTCTGTGGAGGCAGAAACACCTGATCT
AGTTGCATCATGAACCCACCCCGGGTTTCTTAATATTTGTTTTTACCTGTGTAACAATTT
TCTTGTAACACCCGGAAAAGATGGCAAAGAAGAAAAAGGGGAGGGTGGATGTTGCTTGGG
CCTTACTTTTAATGCTTCCTTTCATATTCTCTTGAATTATTTTCTCTGGAAGGACCAAAA
ATTTCTTTGTATTTTCACTATGAAGTTGTCAGTTTTACGGATTATGCTTAGGACATGGGT
GAGTCGATTGGAAAATGGCGGATATTGATGACTGCTTATATCAAAGTATGTAGTTCAAAT
ATTCTAGATTGCAATTT