Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_02s0012g02420.t01
CDS Infomation	cds chromosome:12X:2:9372696:9380547:1 gene:VIT_02s0012g02420 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA pseudouridine synthase [Source:UniProtKB/TrEMBL;Acc:F6HT31]
Sequence	ATGCTGTCGCCTGGTGCAGTAGAAATAGGGAGGGATCTGATGGAAAATGAGAAGGAAAAC AAGGTTTATGTTCACTACACCCACACTCACCCCACCAAATTCTCTAGGTGGACTGCGAGG GAAAGTCACCAATTTATGTATAAAAGGCCCTGGCAACAAGTTCTTGATTTTTACTCAAAT GTGGTGACCGGGCGCTGCTCATTGTTGGGATTGCTTGGAATTGAGACGCATCCTATTCAT GATGGTGAAATTGTAGAGGCTTCTGATAAAACTGAATTTGGTAATGTTCTGACTAAAGAT AGGGGTGGAAGGTGGGCAAGATTGACATTTAAGATTGTTCTTTCGTATCATGGCGCCTCT TTTGATGGGTGGCAGAAGCAGCCTGGCTTGAACACTGTTCAAGGCTTAGTAGAAGCATCA CTTGGGAGATTTGTTGATGAGAGAAAGGCACAACAGCTGAAAGAGAAGAATTTACCTGTA GAAGGCATGGTTACTGTTGCAGGACGCACAGACAAGGGAGTGACAGCTCTTCAACAAGTC TGCTCTTTCTATACTTGGAAGAAGGATGTTAAAGTTCAAGATATTGAAGATGCCATCAAT GGTGCAGCACCAGGAAAGCTCAGGGTTATATCTGTTTCTGAGGTATCACGTATATTCCAT CCTAATTTCTCTGCCAAGTGGAGGCATTATTTTTATATTTTCCCTTTGAATGATGGGGAT GATGGGGAGCAAATTAGTGAGAATGAGATGGATATTCAGAAAATCAGTTTTAATGAAAAG TATGGTGAGCAGGGAAGTGAATGTCCTGCTCAATACAATGGTGGGGAGAATACGGAGAAC TTAATATTTGATGATGATGGTGAGTTTGAAAGCAGAAAGAAACCAAGTACGTTCAGCATA AGCAGAGTCGACCAACTTTTGCGACAATTAGAAGGAAAGTTATTATCCTACAAAATATTT GCACGGGATACAAAAGCTTCAAGAAACATAGGTCCACCAACAGAATGTTTTGTCTTCCAT GCTCGAGCCACAGAAGCCAGATTACAATTTTCTGATGATGGAGAAGGAACAAAAGTTATG TGTATTGAGCTGGTTGCTAATCGCTTCTTACGCAAGATGGTTCGGGTGCTTGTGGCAACA TCAATAAGGGAAGCAGCTGCAGGTGCAGAGCAGGATGCATTGCTTAAGCTGATGGATGCT ACATGCAGGCGAGCCACGGCTCCTCCAGCACCCCCTGATGGCCTTTGTCTCATTGACGTT GGATTTACTGAATTTGATCCACAAATTTGCTTCATCCGATAA

Peptide Sequence

PEP ID	VIT_02s0012g02420.t01
PEP Infomation	pep chromosome:12X:2:9372696:9380547:1 gene:VIT_02s0012g02420 transcript:VIT_02s0012g02420.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA pseudouridine synthase [Source:UniProtKB/TrEMBL;Acc:F6HT31]
Sequence	MLSPGAVEIGRDLMENEKENKVYVHYTHTHPTKFSRWTARESHQFMYKRPWQQVLDFYSN VVTGRCSLLGLLGIETHPIHDGEIVEASDKTEFGNVLTKDRGGRWARLTFKIVLSYHGAS FDGWQKQPGLNTVQGLVEASLGRFVDERKAQQLKEKNLPVEGMVTVAGRTDKGVTALQQV CSFYTWKKDVKVQDIEDAINGAAPGKLRVISVSEVSRIFHPNFSAKWRHYFYIFPLNDGD DGEQISENEMDIQKISFNEKYGEQGSECPAQYNGGENTENLIFDDDGEFESRKKPSTFSI SRVDQLLRQLEGKLLSYKIFARDTKASRNIGPPTECFVFHARATEARLQFSDDGEGTKVM CIELVANRFLRKMVRVLVATSIREAAAGAEQDALLKLMDATCRRATAPPAPPDGLCLIDV GFTEFDPQICFIR

Transcript Sequence

Transcript ID	VIT_02s0012g02420.t01
Transcript Infomation	cdna chromosome:12X:2:9372696:9380547:1 gene:VIT_02s0012g02420 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA pseudouridine synthase [Source:UniProtKB/TrEMBL;Acc:F6HT31]
Sequence	ATGCTGTCGCCTGGTGCAGTAGAAATAGGGAGGGATCTGATGGAAAATGAGAAGGAAAAC AAGGTTTATGTTCACTACACCCACACTCACCCCACCAAATTCTCTAGGTGGACTGCGAGG GAAAGTCACCAATTTATGTATAAAAGGCCCTGGCAACAAGTTCTTGATTTTTACTCAAAT GTGGTGACCGGGCGCTGCTCATTGTTGGGATTGCTTGGAATTGAGACGCATCCTATTCAT GATGGTGAAATTGTAGAGGCTTCTGATAAAACTGAATTTGGTAATGTTCTGACTAAAGAT AGGGGTGGAAGGTGGGCAAGATTGACATTTAAGATTGTTCTTTCGTATCATGGCGCCTCT TTTGATGGGTGGCAGAAGCAGCCTGGCTTGAACACTGTTCAAGGCTTAGTAGAAGCATCA CTTGGGAGATTTGTTGATGAGAGAAAGGCACAACAGCTGAAAGAGAAGAATTTACCTGTA GAAGGCATGGTTACTGTTGCAGGACGCACAGACAAGGGAGTGACAGCTCTTCAACAAGTC TGCTCTTTCTATACTTGGAAGAAGGATGTTAAAGTTCAAGATATTGAAGATGCCATCAAT GGTGCAGCACCAGGAAAGCTCAGGGTTATATCTGTTTCTGAGGTATCACGTATATTCCAT CCTAATTTCTCTGCCAAGTGGAGGCATTATTTTTATATTTTCCCTTTGAATGATGGGGAT GATGGGGAGCAAATTAGTGAGAATGAGATGGATATTCAGAAAATCAGTTTTAATGAAAAG TATGGTGAGCAGGGAAGTGAATGTCCTGCTCAATACAATGGTGGGGAGAATACGGAGAAC TTAATATTTGATGATGATGGTGAGTTTGAAAGCAGAAAGAAACCAAGTACGTTCAGCATA AGCAGAGTCGACCAACTTTTGCGACAATTAGAAGGAAAGTTATTATCCTACAAAATATTT GCACGGGATACAAAAGCTTCAAGAAACATAGGTCCACCAACAGAATGTTTTGTCTTCCAT GCTCGAGCCACAGAAGCCAGATTACAATTTTCTGATGATGGAGAAGGAACAAAAGTTATG TGTATTGAGCTGGTTGCTAATCGCTTCTTACGCAAGATGGTTCGGGTGCTTGTGGCAACA TCAATAAGGGAAGCAGCTGCAGGTGCAGAGCAGGATGCATTGCTTAAGCTGATGGATGCT ACATGCAGGCGAGCCACGGCTCCTCCAGCACCCCCTGATGGCCTTTGTCTCATTGACGTT GGATTTACTGAATTTGATCCACAAATTTGCTTCATCCGATAAGGGTAATCTATTAAGGTG AATCTATCATCATAAACAGATGATGACTTTACATTTCAAAAAGGAATAGCTCGTAATTGG GTGCCTGTACACATGATATATGAATAATGAGTTTAGAATGCTTATGATTCAACGGGAACT ATTGGACTGGACAGCTATGGAGCCGCTGGATTGTCATTTTCATGCTGGAAGATGTTGTAT GTAACTTATGGTGTTTGTTTTTTGACTGAATAGAAAAAACCAAAATATTTTACTTTTTCT ATTCAGTTAAAAGTAACCCATTGACATCATCCAATATAATTAAATTG