Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_02s0012g02340.t01
CDS Infomation

cds chromosome:12X:2:9295170:9300215:1 gene:VIT_02s0012g02340 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGACTTGATGAGCTATTTGCTATGTCTTCTTGTCGCCTGGACCTCAATTTACATCGTT
GTCTCAGCTAGAAGAAGCAAATCTGGTGCTGGCAAGCTTCCGCCTGGACCTGTCCCATTT
CCGATCATTGGAAACCTTTTAAACCTTGGAAACAAACCCCATGAATCCCTGGCTAACCTT
GCCAAAATTTATGGCCCCGTGATGAGTCTCAAGCTTGGCTGTGTAACCACAGTAGTCATC
ACATCTGCAACCATGGCCAAAGAAGTCCTCCAAAAGAAGGACCAGTCCTTCTGCAACCGA
ACCATTCCTGATGCCCTCCGAGCCCTTAACCACAACCAGATCTCCATGGTGTGGCTACCC
GTTTCCACAAAGTGGAGAACCCTTCGGAAGATATGCAATTCACACATATTCACGAATCAA
AAACTAGACTCCAGCAACTACCTCCGCCACCAGAAAGTGCAAGACCTTCTAGCCAATGTT
GAACAAAGCTGCCAGGCTGGTGATGTAGTAGATATTGGCCAAGAAGCTTTCAGAACTACT
CTTAACTTGTTATCAAACACCACTTTTTCTGTGGATCTGGTAGAACCAAGTTCTGATACT
GTGCAGGAGTTTAAGGAGTTAGTACGGCATATGATGGAAGAAGCTGCGAAACCCAATTTG
GCAGATTATTTTCCGGTTGTTAGGAAGATCGATCCACAGGGTATAAGGCGTCGTATGGCA
ATTCATTTTGGAAAGATGATTAAGGTGTTGGATAAAAAGGTCAAGCAACGTCTGCGGTCA
AGACAAGTGCAGGGTTGGATGGCTAGCAGCGATGTGTTAGATACTCTTCTCAACATCAGT
GAAGACAGCAATAATTTTCTTGATATAACTCATATTGACCACTTGTTACTGGACCTATTT
GTTGCGGGGACTGATACAACTGCGAACACATTGGAATGGGCAATGGCAGAACTATTGCAC
AACCCGGAAACACTGTTGAGAGTTCAAGCAGAGCTCCGTCAAACCATAGGTAAAGACAAA
CTGGTAAAAGAATCAGACATCGCCCGACTTCCATACTTGCAAGCAGTGGTGAAAGAAACC
TTCCGATTGCATCCAGCGGTTCCATTCTTACTCCCACGCAAAGTCGAAGTAGACACAGAA
ATGTGTGGGTTCATTGTCCCAAAGGATGCACAAGTACTTGTAAATGTGTGGGCTATAGGC
CGAGATCCCAATCTGTGGGAGAACCCCAACTTGTTTATGCCAGAGAGGTTCTTGGGATCG
GATATGGATGTGAGGGGCCAGAACTTTGAGCTAATCCCATTCGGTGCCGGTAGGCGAATC
TGTCCGGGGTTGCTACTAGGTATCCGGATGGTTCAATTGATGTTGGCTTCACTCATTCAC
TCCAATGACTGGAAGCTTGAAGATGGGCTGACACCAGAGAATATGAACATGGAAGAAAAG
TTTGGCTTCACCTTACAGAAGGCTCAGCCCCTGCGTGTTCTCCCTATCCATTTTTAA

Peptide Sequence

PEP ID

VIT_02s0012g02340.t01
PEP Infomation

pep chromosome:12X:2:9295170:9300215:1 gene:VIT_02s0012g02340 transcript:VIT_02s0012g02340.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDLMSYLLCLLVAWTSIYIVVSARRSKSGAGKLPPGPVPFPIIGNLLNLGNKPHESLANL
AKIYGPVMSLKLGCVTTVVITSATMAKEVLQKKDQSFCNRTIPDALRALNHNQISMVWLP
VSTKWRTLRKICNSHIFTNQKLDSSNYLRHQKVQDLLANVEQSCQAGDVVDIGQEAFRTT
LNLLSNTTFSVDLVEPSSDTVQEFKELVRHMMEEAAKPNLADYFPVVRKIDPQGIRRRMA
IHFGKMIKVLDKKVKQRLRSRQVQGWMASSDVLDTLLNISEDSNNFLDITHIDHLLLDLF
VAGTDTTANTLEWAMAELLHNPETLLRVQAELRQTIGKDKLVKESDIARLPYLQAVVKET
FRLHPAVPFLLPRKVEVDTEMCGFIVPKDAQVLVNVWAIGRDPNLWENPNLFMPERFLGS
DMDVRGQNFELIPFGAGRRICPGLLLGIRMVQLMLASLIHSNDWKLEDGLTPENMNMEEK
FGFTLQKAQPLRVLPIHF

Transcript Sequence

Transcript ID

VIT_02s0012g02340.t01
Transcript Infomation

cdna chromosome:12X:2:9295170:9300215:1 gene:VIT_02s0012g02340 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTCAACAATTCATGGGTAACAAATAGAGTTATTTATCTCTTTGCCTGGACCTCAATTTAA
ACCTTCTCCCTGGGACGAGGCGCGGAGAGAGATGGACTTGATGAGCTATTTGCTATGTCT
TCTTGTCGCCTGGACCTCAATTTACATCGTTGTCTCAGCTAGAAGAAGCAAATCTGGTGC
TGGCAAGCTTCCGCCTGGACCTGTCCCATTTCCGATCATTGGAAACCTTTTAAACCTTGG
AAACAAACCCCATGAATCCCTGGCTAACCTTGCCAAAATTTATGGCCCCGTGATGAGTCT
CAAGCTTGGCTGTGTAACCACAGTAGTCATCACATCTGCAACCATGGCCAAAGAAGTCCT
CCAAAAGAAGGACCAGTCCTTCTGCAACCGAACCATTCCTGATGCCCTCCGAGCCCTTAA
CCACAACCAGATCTCCATGGTGTGGCTACCCGTTTCCACAAAGTGGAGAACCCTTCGGAA
GATATGCAATTCACACATATTCACGAATCAAAAACTAGACTCCAGCAACTACCTCCGCCA
CCAGAAAGTGCAAGACCTTCTAGCCAATGTTGAACAAAGCTGCCAGGCTGGTGATGTAGT
AGATATTGGCCAAGAAGCTTTCAGAACTACTCTTAACTTGTTATCAAACACCACTTTTTC
TGTGGATCTGGTAGAACCAAGTTCTGATACTGTGCAGGAGTTTAAGGAGTTAGTACGGCA
TATGATGGAAGAAGCTGCGAAACCCAATTTGGCAGATTATTTTCCGGTTGTTAGGAAGAT
CGATCCACAGGGTATAAGGCGTCGTATGGCAATTCATTTTGGAAAGATGATTAAGGTGTT
GGATAAAAAGGTCAAGCAACGTCTGCGGTCAAGACAAGTGCAGGGTTGGATGGCTAGCAG
CGATGTGTTAGATACTCTTCTCAACATCAGTGAAGACAGCAATAATTTTCTTGATATAAC
TCATATTGACCACTTGTTACTGGACCTATTTGTTGCGGGGACTGATACAACTGCGAACAC
ATTGGAATGGGCAATGGCAGAACTATTGCACAACCCGGAAACACTGTTGAGAGTTCAAGC
AGAGCTCCGTCAAACCATAGGTAAAGACAAACTGGTAAAAGAATCAGACATCGCCCGACT
TCCATACTTGCAAGCAGTGGTGAAAGAAACCTTCCGATTGCATCCAGCGGTTCCATTCTT
ACTCCCACGCAAAGTCGAAGTAGACACAGAAATGTGTGGGTTCATTGTCCCAAAGGATGC
ACAAGTACTTGTAAATGTGTGGGCTATAGGCCGAGATCCCAATCTGTGGGAGAACCCCAA
CTTGTTTATGCCAGAGAGGTTCTTGGGATCGGATATGGATGTGAGGGGCCAGAACTTTGA
GCTAATCCCATTCGGTGCCGGTAGGCGAATCTGTCCGGGGTTGCTACTAGGTATCCGGAT
GGTTCAATTGATGTTGGCTTCACTCATTCACTCCAATGACTGGAAGCTTGAAGATGGGCT
GACACCAGAGAATATGAACATGGAAGAAAAGTTTGGCTTCACCTTACAGAAGGCTCAGCC
CCTGCGTGTTCTCCCTATCCATTTTTAA