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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_02s0012g02270.t01
CDS Infomation

cds chromosome:12X:2:9179277:9192023:1 gene:VIT_02s0012g02270 gene_biotype:protein_coding transcript_biotype:protein_coding description:Autophagy protein 5 [Source:UniProtKB/TrEMBL;Acc:F6HT40]
Sequence

ATGGATGTAGAAGCTATGGGCAGAGAAGCACAAAAGTATGTTTGGGAAGGGGCTATTCCC
CTCCAGATTCATCTCCATGAATCCGAAGTCACCACTCTTCCTCATCCTTCTCCTGCTCTT
GTCTTAGCACCTCGGATGGGGTACTTACCTTTGTTACTTCCTCTACTCAAGCCACACTTC
AGTAGCACACTTCCACCTGGTGTAGATACTATTTGGTTTGAGTATAAAGGTTTGGCACTC
AAATGGCATATACCAACAGGAGTTCTTTTTGATCTTCTATGTGCAGAACAAGAAAGACCT
TGGAATTTGACGGTACATTTTAGAGGATACCCCGGTAATATTTTGACTCCATGCGAAGGT
GAAGATAGTGTTAAGTGGAGCTTTATTAACTCATTGAAAGAGGCAGCATATATAGTCAAT
GGGAACTGCAAGAATGTAATGAACATGTCACAATCTGATCAGATGGAGCTCTGGCACTCT
GTGTTAAACGGTAATATGGAGGCCTACCAACGGGTTTCATCTAAGCTTAAACTTGAAAAA
GTTGGAGATCAGTATGTAGGGAAACCAAATTCAAACTTATTAAAATCTCGAACAAACACC
GGTGAAACGGATACTGGTGGACCAGTCAAGACAGGTAGAATTCCAGTTCGTTTGTATGTT
TGGAGTGTGAGCAAGGATTTTGATGATTTAGAAGATGCACCTCAAATTGATAGTTGGGAC
CAAATCTCTTACATGAACCGACCTGTTGAGATTCACAGAGAAGAAGACAAATGCTTCACC
TTACGTGATGCGGTGAAAGCTCTTCTTCCAGAGTTATTTGTGGAAAAAACCTTAATTGAT
GAGGAAATATCCAGAATAGAACTTGAAGAAGAATCAAGAGCCCCTTCAGACGATGAAAGC
AACACAAGAAATGAGGAAGATGTTGAGGAAAAACAGCGTGAAAATGTGGAGTGTTGCTGC
CCATCTGATGATGCTGAAACCAAGTTGAAGCTGGTCCGCATCCAAGGGATTGAACCAAAA
TTGGAGATACCTTTCTCTTGGGTGGTTAACAACCTGATGAATCCGGAGCACTTTCTTCAT
ATTTGTGTTTTCGTCAAAGTTCCACAAGCCAAGCCATTACCACACGACAGGTAA

Peptide Sequence

PEP ID

VIT_02s0012g02270.t01
PEP Infomation

pep chromosome:12X:2:9179277:9192023:1 gene:VIT_02s0012g02270 transcript:VIT_02s0012g02270.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Autophagy protein 5 [Source:UniProtKB/TrEMBL;Acc:F6HT40]
Sequence

MDVEAMGREAQKYVWEGAIPLQIHLHESEVTTLPHPSPALVLAPRMGYLPLLLPLLKPHF
SSTLPPGVDTIWFEYKGLALKWHIPTGVLFDLLCAEQERPWNLTVHFRGYPGNILTPCEG
EDSVKWSFINSLKEAAYIVNGNCKNVMNMSQSDQMELWHSVLNGNMEAYQRVSSKLKLEK
VGDQYVGKPNSNLLKSRTNTGETDTGGPVKTGRIPVRLYVWSVSKDFDDLEDAPQIDSWD
QISYMNRPVEIHREEDKCFTLRDAVKALLPELFVEKTLIDEEISRIELEEESRAPSDDES
NTRNEEDVEEKQRENVECCCPSDDAETKLKLVRIQGIEPKLEIPFSWVVNNLMNPEHFLH
ICVFVKVPQAKPLPHDR

Transcript Sequence

Transcript ID

VIT_02s0012g02270.t01
Transcript Infomation

cdna chromosome:12X:2:9179277:9192023:1 gene:VIT_02s0012g02270 gene_biotype:protein_coding transcript_biotype:protein_coding description:Autophagy protein 5 [Source:UniProtKB/TrEMBL;Acc:F6HT40]
Sequence

ATGTCATAATTAACTGAAAACCTCAAAACCTTGTATCAGGAGTGAAGGACCGTGCAAGAG
GAAGGGCGTAGGTGCGTTCCGGGGAAGAAGAGGTGAAGAGATGGATGTAGAAGCTATGGG
CAGAGAAGCACAAAAGTATGTTTGGGAAGGGGCTATTCCCCTCCAGATTCATCTCCATGA
ATCCGAAGTCACCACTCTTCCTCATCCTTCTCCTGCTCTTGTCTTAGCACCTCGGATGGG
GTACTTACCTTTGTTACTTCCTCTACTCAAGCCACACTTCAGTAGCACACTTCCACCTGG
TGTAGATACTATTTGGTTTGAGTATAAAGGTTTGGCACTCAAATGGCATATACCAACAGG
AGTTCTTTTTGATCTTCTATGTGCAGAACAAGAAAGACCTTGGAATTTGACGGTACATTT
TAGAGGATACCCCGGTAATATTTTGACTCCATGCGAAGGTGAAGATAGTGTTAAGTGGAG
CTTTATTAACTCATTGAAAGAGGCAGCATATATAGTCAATGGGAACTGCAAGAATGTAAT
GAACATGTCACAATCTGATCAGATGGAGCTCTGGCACTCTGTGTTAAACGGTAATATGGA
GGCCTACCAACGGGTTTCATCTAAGCTTAAACTTGAAAAAGTTGGAGATCAGTATGTAGG
GAAACCAAATTCAAACTTATTAAAATCTCGAACAAACACCGGTGAAACGGATACTGGTGG
ACCAGTCAAGACAGGTAGAATTCCAGTTCGTTTGTATGTTTGGAGTGTGAGCAAGGATTT
TGATGATTTAGAAGATGCACCTCAAATTGATAGTTGGGACCAAATCTCTTACATGAACCG
ACCTGTTGAGATTCACAGAGAAGAAGACAAATGCTTCACCTTACGTGATGCGGTGAAAGC
TCTTCTTCCAGAGTTATTTGTGGAAAAAACCTTAATTGATGAGGAAATATCCAGAATAGA
ACTTGAAGAAGAATCAAGAGCCCCTTCAGACGATGAAAGCAACACAAGAAATGAGGAAGA
TGTTGAGGAAAAACAGCGTGAAAATGTGGAGTGTTGCTGCCCATCTGATGATGCTGAAAC
CAAGTTGAAGCTGGTCCGCATCCAAGGGATTGAACCAAAATTGGAGATACCTTTCTCTTG
GGTGGTTAACAACCTGATGAATCCGGAGCACTTTCTTCATATTTGTGTTTTCGTCAAAGT
TCCACAAGCCAAGCCATTACCACACGACAGGTAAAGTTGGGTTCTTTCATATATAGACTA
ATTATTCCACGTGAAAATCTAATTTGCTGTACAGAATTTACACAACAGTTAAAACATCAA
TCGGTTAATGTCATTATTTCTCGGCACTTCACTGT