Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_02s0012g01920.t01
CDS Infomation

cds chromosome:12X:2:8414590:8435022:1 gene:VIT_02s0012g01920 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTTTATTTGAATGGTGAATGGACTGATTTCCCTGAAGATCTTGTTGGCTTGGTGAAG
AAAGATTTTCAGGTAAAGAAGTCATATATTGAGGTTGAGCTCAACAACAATCACTTTATG
ATAGACTTTTTGCACATGAAGCGAGTTGATCTGAAGACAGGTATGGAGAAACCAATTGCT
TGGATTGATGAAGCTGGTAACTGCTTCTTTCCAGAAATTTTCTCTGGTGATGCTGAATCC
CATAACTGCTGTGGACATGAATGTGGCCAACAGCTTTTATTTAGGGAGCCTTATGGTTCC
CATGATATCAAACTGCAACTTGAGATTGATGTAAATGACGCGGGTCACACCAACTTAAAG
GAATGTAGTGGAGAGTCAAATCCTGTTATTAAGCATGTTCTCATTGATAAAAATCCTGCT
AGTGATCAGAATGACGTAGAAGTTGAGGATAGTTGCAACAAAACATCTGATGCCAAAATG
GATAAGGCTGTGGGAGAAAATCAACAGATGGAGGGAAAATTAGTCACCAGGATTGAATCT
GTGCATGGAACTTTGAAGTTTGATACTGTGCGGGATATGTTTATTAGCAGCATGAGCCCA
TTTATTAGTGCAAGTATACTTGAGGTATACCAGGGCTCAAGTTCTTCAATGCAAGCTCGA
CTAGAGCTCTTTCAGAAGCAGGTTGAGATCACCAGTAAGTATCGCACTGAGGCAAATGTT
AGATATGCTTGGCTTGCTTCCTCTAAAGAAGCACTGTCTAGTATCATGATGTATGGGCTT
GGGCACTATGGAACATCCCAAGAGAAGCTCACATATGGTATTGGTGTTCATCTCACAGCT
GTGAACTTCCCGTACATCAGTGCAAATTATTGTGATGTTGACGAAAATGGTGTACAACAC
GTCGTATTATGTCGTGTTATACTGGGAAATATGGAGCTTGTTCATCTTGGATCCAAACAA
TGTTACCCCAGTTGTGAGGATTTTGACAGTGGAGTTGATGATCTTCAAAATCCGAGACAT
TATATAGTCTGGAATATGAATATGAACACACACATCTATCCAGAATTTGTTGTTAGTTTC
AAGGTTTCTTCTAGTTCCAGTGCCGAAGGATATCTAGTTGAAAATGGGAGAAAGGATGAT
GTTTCAGGGTTTTCTCCTCCTCAAAGGCAGCCCGAAGGCCAGTTGCAGTTAGCCTCACAT
CATCCGGTTGGTTTGGGACCCCACTGCCCTCAAACTCCAGGTTTAGAGGGATCTCTTGGA
AAAGCTGCTACTTTTGGTTCAAGCACTGTAAAGGTTCCCAAATCCCCTTGGATGCCTTTC
CCTATGTTGTTTGCAGCTATCTCAAAGAAGGTTCCTCTGAAAGATATGCAACTAGTTAAT
GCTCAATATGAACAATTTAGGACGAAAAAGATAAATCGGGCTGATTTTGTTAAAAAGTTG
AGAATGATAGTTGGAGACACTTTGTTGAGGTCCACAATAACACATCTTCAGTGCAAGTGC
CATATTGAAGCCTTCATGCTATGGGTACTATGGGCACAATTCCTTCATATGAGTTCCATC
AAAATCTCAGGGCGATGCAAAAGTGCCAAAGCAGGAGCCTGA

Peptide Sequence

PEP ID

VIT_02s0012g01920.t01
PEP Infomation

pep chromosome:12X:2:8414590:8435022:1 gene:VIT_02s0012g01920 transcript:VIT_02s0012g01920.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MFYLNGEWTDFPEDLVGLVKKDFQVKKSYIEVELNNNHFMIDFLHMKRVDLKTGMEKPIA
WIDEAGNCFFPEIFSGDAESHNCCGHECGQQLLFREPYGSHDIKLQLEIDVNDAGHTNLK
ECSGESNPVIKHVLIDKNPASDQNDVEVEDSCNKTSDAKMDKAVGENQQMEGKLVTRIES
VHGTLKFDTVRDMFISSMSPFISASILEVYQGSSSSMQARLELFQKQVEITSKYRTEANV
RYAWLASSKEALSSIMMYGLGHYGTSQEKLTYGIGVHLTAVNFPYISANYCDVDENGVQH
VVLCRVILGNMELVHLGSKQCYPSCEDFDSGVDDLQNPRHYIVWNMNMNTHIYPEFVVSF
KVSSSSSAEGYLVENGRKDDVSGFSPPQRQPEGQLQLASHHPVGLGPHCPQTPGLEGSLG
KAATFGSSTVKVPKSPWMPFPMLFAAISKKVPLKDMQLVNAQYEQFRTKKINRADFVKKL
RMIVGDTLLRSTITHLQCKCHIEAFMLWVLWAQFLHMSSIKISGRCKSAKAGA

Transcript Sequence

Transcript ID

VIT_02s0012g01920.t01
Transcript Infomation

cdna chromosome:12X:2:8414590:8435022:1 gene:VIT_02s0012g01920 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTCGAACCACATCGGTGTGGCATCAGAGTCCCATCTCATGAAAATCGTATCCAATCCGCC
TTTTCGGTCTTCAGAGGAGCAACTTCGTTTCCAACTGTAGAGTGACCAAGGAAACTGCTC
TTCGTATGGACTATATTGTGGTAAGGGAGAAGATGAACATGTACAGAATGACAACTGATT
GTCAGGCCTTGGGGTATTCAATTATCTTCGGCATTGTGGTTTCTCTGAGAATAGGTACCT
GACTTTAGGATTGTACATTACATTAGATTTGAACTCGGGACTAAATCTGTGCATAGGGAT
TCCTTATATACATTGTAGAAATGGAAGCGAAGTTTGAAAAGGTATTGGATACTAATAGAA
GACTTGTGGTCGGCTTGAAGAGGAAGCGGGTGGCTCAGTATGCAGCAAGCTGGTCCCCCA
TGCATAAAAATAAGCTCCGCAAGCAGAGAAAATCAGATGGGTGCAGAATGAATTCTGGGT
CAAATTTTGGAAAAACTTTACTTAAATATTATTCAAATTTTATGAAAACTGAATTGCCAC
AACGCATAATGTTTTATTTGAATGGTGAATGGACTGATTTCCCTGAAGATCTTGTTGGCT
TGGTGAAGAAAGATTTTCAGGTAAAGAAGTCATATATTGAGGTTGAGCTCAACAACAATC
ACTTTATGATAGACTTTTTGCACATGAAGCGAGTTGATCTGAAGACAGGTATGGAGAAAC
CAATTGCTTGGATTGATGAAGCTGGTAACTGCTTCTTTCCAGAAATTTTCTCTGGTGATG
CTGAATCCCATAACTGCTGTGGACATGAATGTGGCCAACAGCTTTTATTTAGGGAGCCTT
ATGGTTCCCATGATATCAAACTGCAACTTGAGATTGATGTAAATGACGCGGGTCACACCA
ACTTAAAGGAATGTAGTGGAGAGTCAAATCCTGTTATTAAGCATGTTCTCATTGATAAAA
ATCCTGCTAGTGATCAGAATGACGTAGAAGTTGAGGATAGTTGCAACAAAACATCTGATG
CCAAAATGGATAAGGCTGTGGGAGAAAATCAACAGATGGAGGGAAAATTAGTCACCAGGA
TTGAATCTGTGCATGGAACTTTGAAGTTTGATACTGTGCGGGATATGTTTATTAGCAGCA
TGAGCCCATTTATTAGTGCAAGTATACTTGAGGTATACCAGGGCTCAAGTTCTTCAATGC
AAGCTCGACTAGAGCTCTTTCAGAAGCAGGTTGAGATCACCAGTAAGTATCGCACTGAGG
CAAATGTTAGATATGCTTGGCTTGCTTCCTCTAAAGAAGCACTGTCTAGTATCATGATGT
ATGGGCTTGGGCACTATGGAACATCCCAAGAGAAGCTCACATATGGTATTGGTGTTCATC
TCACAGCTGTGAACTTCCCGTACATCAGTGCAAATTATTGTGATGTTGACGAAAATGGTG
TACAACACGTCGTATTATGTCGTGTTATACTGGGAAATATGGAGCTTGTTCATCTTGGAT
CCAAACAATGTTACCCCAGTTGTGAGGATTTTGACAGTGGAGTTGATGATCTTCAAAATC
CGAGACATTATATAGTCTGGAATATGAATATGAACACACACATCTATCCAGAATTTGTTG
TTAGTTTCAAGGTTTCTTCTAGTTCCAGTGCCGAAGGATATCTAGTTGAAAATGGGAGAA
AGGATGATGTTTCAGGGTTTTCTCCTCCTCAAAGGCAGCCCGAAGGCCAGTTGCAGTTAG
CCTCACATCATCCGGTTGGTTTGGGACCCCACTGCCCTCAAACTCCAGGTTTAGAGGGAT
CTCTTGGAAAAGCTGCTACTTTTGGTTCAAGCACTGTAAAGGTTCCCAAATCCCCTTGGA
TGCCTTTCCCTATGTTGTTTGCAGCTATCTCAAAGAAGGTTCCTCTGAAAGATATGCAAC
TAGTTAATGCTCAATATGAACAATTTAGGACGAAAAAGATAAATCGGGCTGATTTTGTTA
AAAAGTTGAGAATGATAGTTGGAGACACTTTGTTGAGGTCCACAATAACACATCTTCAGT
GCAAGTGCCATATTGAAGCCTTCATGCTATGGGTACTATGGGCACAATTCCTTCATATGA
GTTCCATCAAAATCTCAGGGCGATGCAAAAGTGCCAAAGCAGGAGCCTGAAACATGTGAG
GGCCTCTACTGACCACATTACATCTCTGCTTTTGAATATGGTATGTTGGTTGGTCTACTG
GCCGTGGAGTTACTATACATTTGAAGACAAGACCATTAAATTCTTGTTTTCTAGAAATGA
GCCGACATAAATTTGTGAATATAATAGGCCTTGTTCAAGGGTCGTAGGTTTTATGTTTAT
GGAAACTACCACTAGTTTTTTATTCAGAGTGAAGGTTTATCTATGACTTGCTGAACTGGA
ACATGGTAACGAGCATAATTAGTGGAGCTTCCTTTTGTTGTGGCTGATTAATGGAACCAT
ATTGGTGTTTGACAATTGCCAAAGCCTAGATTATTTTTATGCATTTATATAAGGATTGTA
CAATTATTGAGATTACCTTCAACTCTAATCTCCAACTCATAGTTCTCATATCAGAAGGCT
ATGAGTACTCTAGAAAAGTTATTGTTTTTGTTCTGAAATACCTAATACTGAACAGATTGG
TGCCT