Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_02s0012g01800.t01
CDS Infomation

cds chromosome:12X:2:8212643:8220356:-1 gene:VIT_02s0012g01800 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGCTTCCCTCTTCTTCTTCTCCCAAAATCCATTCACATCTCCTCAAATTTCCCAT
CCAAAGATTAGTCTCTCTTCTCCCAAACCCACTCTCACACTCTTCACACCTCCGCCTTTC
ATTTCAAACAATGCCACTCGTCGTCTCTCCTGCAAGGCTCTCTCCACCATCTCTGTCAAC
CCCAGCAACTACGAGTTCTCTGATGCTTCTTCTGAGATGGAGTTGAGATTACAATTAGGG
GGCGGTGGTACATTAAGTTCTAGAGACATTTTTGTGGATGCTGAAGACAGCTCCTTAAAA
ATTGGTGTAAAACAGTCTGGGTCTTTCATCACACTTGTTGAAATTAATAAATTGTATGAG
AAGATAAAGTCTTCTGAAACAATATGGTATATAGATGAAGATCAACTGGTTGTTAACTTG
AAGAAGCAAGACCCAGATTTGAAATGGCCTGACATTGTGGAGTCCTGGGAATCTTTGACA
GCAGGAGCTATGCAATTGCTGAAAGGAACATCAATTTACATTGTTGGGGATTCAACTGAA
ATTAATGATAAAGTTGCTAGGGAACTTGCTGTTGGTTTGGGGTATACCCCACTTAATACC
AAGGAGTTGTTGGAAACATTTGCCAAACAATCCATTGATTCATGGGTGACAGCTGATGGG
TCTGAGTCTGTAGCAGAAGCAGAAAGTGCTGTATTAGAAAACCTAAGTAGTCATGTCCGT
GCTGTTATTGCGACATTAGGAGGACTGCATGGAGCTGCTCGAAGAGCTGATAAATGGAGG
CATCTTTATGCTGGATTTACTGTCTGGCTGTCACAGTCTGAATCCATAGATGAAGAGTCA
GCAAAGGAGGAGGCCAGAAGGCACATCCAAGAAGGCAGTCTAGGCTACTCAAATGCAGAT
GTTGTGGTCAAGCTTCATGGTTGGGATGCCGATCATGCTAAAACTGTGGCTCAAGCTTCC
CTCAGTGCCCTTAAACAGCTAATCATGTCAGACAAGAAGCTTCCAGGTAAGAAGAGCCTC
TACATCAGGCTAGGATGTCGGGGTGATTGGCCAGATATCAAGCCTCCTGGATGGGACCCA
TCAACTGGAGCTGAGGTACCTGCTGGTACTTTGTAG

Peptide Sequence

PEP ID

VIT_02s0012g01800.t01
PEP Infomation

pep chromosome:12X:2:8212643:8220356:-1 gene:VIT_02s0012g01800 transcript:VIT_02s0012g01800.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAASLFFFSQNPFTSPQISHPKISLSSPKPTLTLFTPPPFISNNATRRLSCKALSTISVN
PSNYEFSDASSEMELRLQLGGGGTLSSRDIFVDAEDSSLKIGVKQSGSFITLVEINKLYE
KIKSSETIWYIDEDQLVVNLKKQDPDLKWPDIVESWESLTAGAMQLLKGTSIYIVGDSTE
INDKVARELAVGLGYTPLNTKELLETFAKQSIDSWVTADGSESVAEAESAVLENLSSHVR
AVIATLGGLHGAARRADKWRHLYAGFTVWLSQSESIDEESAKEEARRHIQEGSLGYSNAD
VVVKLHGWDADHAKTVAQASLSALKQLIMSDKKLPGKKSLYIRLGCRGDWPDIKPPGWDP
STGAEVPAGTL

Transcript Sequence

Transcript ID

VIT_02s0012g01800.t01
Transcript Infomation

cdna chromosome:12X:2:8212643:8220356:-1 gene:VIT_02s0012g01800 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTGGTATGTAGGTGAAAGCATTTGCCTTGATAAGCAATTTGAATGGTGGCCCTTATCCAG
CTTTAGGAACTTCGGAAATGGCTGCTTCCCTCTTCTTCTTCTCCCAAAATCCATTCACAT
CTCCTCAAATTTCCCATCCAAAGATTAGTCTCTCTTCTCCCAAACCCACTCTCACACTCT
TCACACCTCCGCCTTTCATTTCAAACAATGCCACTCGTCGTCTCTCCTGCAAGGCTCTCT
CCACCATCTCTGTCAACCCCAGCAACTACGAGTTCTCTGATGCTTCTTCTGAGATGGAGT
TGAGATTACAATTAGGGGGCGGTGGTACATTAAGTTCTAGAGACATTTTTGTGGATGCTG
AAGACAGCTCCTTAAAAATTGGTGTAAAACAGTCTGGGTCTTTCATCACACTTGTTGAAA
TTAATAAATTGTATGAGAAGATAAAGTCTTCTGAAACAATATGGTATATAGATGAAGATC
AACTGGTTGTTAACTTGAAGAAGCAAGACCCAGATTTGAAATGGCCTGACATTGTGGAGT
CCTGGGAATCTTTGACAGCAGGAGCTATGCAATTGCTGAAAGGAACATCAATTTACATTG
TTGGGGATTCAACTGAAATTAATGATAAAGTTGCTAGGGAACTTGCTGTTGGTTTGGGGT
ATACCCCACTTAATACCAAGGAGTTGTTGGAAACATTTGCCAAACAATCCATTGATTCAT
GGGTGACAGCTGATGGGTCTGAGTCTGTAGCAGAAGCAGAAAGTGCTGTATTAGAAAACC
TAAGTAGTCATGTCCGTGCTGTTATTGCGACATTAGGAGGACTGCATGGAGCTGCTCGAA
GAGCTGATAAATGGAGGCATCTTTATGCTGGATTTACTGTCTGGCTGTCACAGTCTGAAT
CCATAGATGAAGAGTCAGCAAAGGAGGAGGCCAGAAGGCACATCCAAGAAGGCAGTCTAG
GCTACTCAAATGCAGATGTTGTGGTCAAGCTTCATGGTTGGGATGCCGATCATGCTAAAA
CTGTGGCTCAAGCTTCCCTCAGTGCCCTTAAACAGCTAATCATGTCAGACAAGAAGCTTC
CAGGTAAGAAGAGCCTCTACATCAGGCTAGGATGTCGGGGTGATTGGCCAGATATCAAGC
CTCCTGGATGGGACCCATCAACTGGAGCTGAGGTACCTGCTGGTACTTTGTAG