Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_02s0012g01210.t01
CDS Infomation

cds chromosome:12X:2:7296734:7304671:1 gene:VIT_02s0012g01210 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTGAAGGACACGGTGGGCGATCTCAACACTGACTCCTTCGTAAAGCTTCTCTCGAAG
CTTATCGGAGAATCCGAATACGTCCAGAACAACCCGCCGGACCTTATACCTCAGGAAGAC
CGGATTGTGAGGCATGTCCTCGACGCACTTCTTCCCTACAGCACCCAAACCGGCGGCGGA
CCACTCATAGTCAACCACGTCACTTACTTTCCCGGCAGAGGAAACGTCATTGTTGAGTAC
CCCGGCACTGTGCCTGGGAAGATCTTGTCCTTTGTTGGAATGCACATGGATGTCGTCACG
GCCAACCCTAACGATTGGGATTTTGATCCTTTCACACTGAGCATTGATGGGGATAAACTT
CGTGGCCGTGGAACTACTGATTGTTTAGGGCATGTTGCACTTATAACTGAACTCATGAGA
AGGCTAGGAGAGACCAAGCCAAAACTGAAGTCTACTGTGGTTGCTGTCTTCATAGCCAAT
GAAGAAAACTCGGCTATTTCAGGGGTTGGTGTGGATGCTCTGGTAAAAGATGGATTGCTG
AATAAGCTAAAGGAAGGTCCTCTGTATTGGATTGACACAGCAGATAAACAACCCTGCATT
GGTACTGGGGGTATGATCCCATGGAAACTTAGAGTGACTGGGAAGCTTTTTCATAGCGGT
CTACCACACAAGGCTATAAATCCATTGGAGCTAGCCATGGATGCAGTTAAAGAAATCCAG
CTGCGTTTCTATAGAGATTTCCCTCCCCATCCAAAGGAGCAAATCTATGGGTTTGCGACA
CCATCAACCATGAAGCCAACTCAATGGCATTATCCAGGAGGCGGGATCAATCAAATTCCA
GCTGAGTGTACGATTTCAGGAGATGTCAGGTTAACTCCGTTTTACAATGTGATAGATGTA
ATGAAGAAGTTACAAGAATATGTAGACGACATAAATAACCACATCGAGAGGCTAGAATCA
CGGGGCCCAGTTTCGAAATATGTCCTACCAGATGAAGACCTAAGGGGAAGCCTTACAATA
AGTTTTGATGAGGCAATGTCTGGAGTTGCTTGTGATCTTAAATCTCATGGCTTCCATGTA
CTATCGAAGGCAACTGAGGAGGTGGTTGGGTATGTGAAGCCTTACTCAATCACTGGTAGT
TTGCCGCTCATTCGTGAACTGCAGGATGAAGGCTTTGATGTTCAAACCTCAGGCTATGGT
TTAATGGCGACATACCATGCCAAGAATGAATACTGCCTTCTTTCTGATATGTGCCAAGGC
TACCAAGTGTTTGTCAGCATCATTTCCCAGTTGGAAGATTGA

Peptide Sequence

PEP ID

VIT_02s0012g01210.t01
PEP Infomation

pep chromosome:12X:2:7296734:7304671:1 gene:VIT_02s0012g01210 transcript:VIT_02s0012g01210.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVKDTVGDLNTDSFVKLLSKLIGESEYVQNNPPDLIPQEDRIVRHVLDALLPYSTQTGGG
PLIVNHVTYFPGRGNVIVEYPGTVPGKILSFVGMHMDVVTANPNDWDFDPFTLSIDGDKL
RGRGTTDCLGHVALITELMRRLGETKPKLKSTVVAVFIANEENSAISGVGVDALVKDGLL
NKLKEGPLYWIDTADKQPCIGTGGMIPWKLRVTGKLFHSGLPHKAINPLELAMDAVKEIQ
LRFYRDFPPHPKEQIYGFATPSTMKPTQWHYPGGGINQIPAECTISGDVRLTPFYNVIDV
MKKLQEYVDDINNHIERLESRGPVSKYVLPDEDLRGSLTISFDEAMSGVACDLKSHGFHV
LSKATEEVVGYVKPYSITGSLPLIRELQDEGFDVQTSGYGLMATYHAKNEYCLLSDMCQG
YQVFVSIISQLED

Transcript Sequence

Transcript ID

VIT_02s0012g01210.t01
Transcript Infomation

cdna chromosome:12X:2:7296734:7304671:1 gene:VIT_02s0012g01210 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAGTCTCGGCTTCTTTGTCTCTCGCTGACTCCCCATACCCATCAGAAATGGTGAAGGACA
CGGTGGGCGATCTCAACACTGACTCCTTCGTAAAGCTTCTCTCGAAGCTTATCGGAGAAT
CCGAATACGTCCAGAACAACCCGCCGGACCTTATACCTCAGGAAGACCGGATTGTGAGGC
ATGTCCTCGACGCACTTCTTCCCTACAGCACCCAAACCGGCGGCGGACCACTCATAGTCA
ACCACGTCACTTACTTTCCCGGCAGAGGAAACGTCATTGTTGAGTACCCCGGCACTGTGC
CTGGGAAGATCTTGTCCTTTGTTGGAATGCACATGGATGTCGTCACGGCCAACCCTAACG
ATTGGGATTTTGATCCTTTCACACTGAGCATTGATGGGGATAAACTTCGTGGCCGTGGAA
CTACTGATTGTTTAGGGCATGTTGCACTTATAACTGAACTCATGAGAAGGCTAGGAGAGA
CCAAGCCAAAACTGAAGTCTACTGTGGTTGCTGTCTTCATAGCCAATGAAGAAAACTCGG
CTATTTCAGGGGTTGGTGTGGATGCTCTGGTAAAAGATGGATTGCTGAATAAGCTAAAGG
AAGGTCCTCTGTATTGGATTGACACAGCAGATAAACAACCCTGCATTGGTACTGGGGGTA
TGATCCCATGGAAACTTAGAGTGACTGGGAAGCTTTTTCATAGCGGTCTACCACACAAGG
CTATAAATCCATTGGAGCTAGCCATGGATGCAGTTAAAGAAATCCAGCTGCGTTTCTATA
GAGATTTCCCTCCCCATCCAAAGGAGCAAATCTATGGGTTTGCGACACCATCAACCATGA
AGCCAACTCAATGGCATTATCCAGGAGGCGGGATCAATCAAATTCCAGCTGAGTGTACGA
TTTCAGGAGATGTCAGGTTAACTCCGTTTTACAATGTGATAGATGTAATGAAGAAGTTAC
AAGAATATGTAGACGACATAAATAACCACATCGAGAGGCTAGAATCACGGGGCCCAGTTT
CGAAATATGTCCTACCAGATGAAGACCTAAGGGGAAGCCTTACAATAAGTTTTGATGAGG
CAATGTCTGGAGTTGCTTGTGATCTTAAATCTCATGGCTTCCATGTACTATCGAAGGCAA
CTGAGGAGGTGGTTGGGTATGTGAAGCCTTACTCAATCACTGGTAGTTTGCCGCTCATTC
GTGAACTGCAGGATGAAGGCTTTGATGTTCAAACCTCAGGCTATGGTTTAATGGCGACAT
ACCATGCCAAGAATGAATACTGCCTTCTTTCTGATATGTGCCAAGGCTACCAAGTGTTTG
TCAGCATCATTTCCCAGTTGGAAGATTGACACTGCTGACTGCTAAATCATACCAGCAAAC
ATAAAATATGCAAATGCTCACGTTTCTTCTCTAATCCTCTCAGTATTAAAGGGATTGTAT
AAGTTTTCAAAGCCAGTTACTTGTTTTACATGCAGGGCTTACGTTTCTTGATTTGATATT
GACTGCCTTTAGTTTTGTTTTCCTTCCCCTTCTCTATGTTTTCAGACAATCTCATGCTCA
ACATACTAAGATTCTGCAATAGATTGTGCCCT