Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_02s0012g01010.t01
CDS Infomation

cds chromosome:12X:2:6975111:6977453:-1 gene:VIT_02s0012g01010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGGGATGTCCAAGCAGGACCCATCACCGGCCTTTGCAGAAACAGTGGAGGAGATC
ATGAGAATCTACAGATCACTACCACCAAGACCCAAAATTGAGGAGGTTGAAGCAGCCATG
ACTGTTATCAGGACAGCGGACTGTGAAGAGCAGAAGAGGCTCGAGGAGGTTGCAAGGCAA
GAGGTCCCCCAGGGGGTCCCACCTGAGCTCTTCTCTGTTCTGCAGCAGGCGAGGAAGACC
ATGGTGCTGTTTCAGTGCCATGAGGAGAGGGAAGAGGCTCTTCACTTGGTCGAGAGGAAT
AAGCTGTTCAATACATTTGATGAGCTCATTCAGAAAGCTTCTGAGGTGGTTTCCGGGGGT
GTCCCGATTGAGAAGCAGATTGATTTGGGTGACCCAGTTGGGAAAAGTGGGAGAAAAGAT
GTGATCAGTGTTGAGAGTTTGATTAAGAGGGGAGAAGATGAGGAATCGGGGGCAGATGGT
TTCAAGGGTTTGGTGAGGAGTTCTTCCGCGAAGGCCATTTTCGTTTCAGGTGAGGACGAT
ACCGAGAAGTTCAATCTCATGAAGGTGGCAGCCCTTATTGAAAAAACTGCTAAAATCAAA
GCAGGGGTTCTTGATCTTCAAGGCAAGTTGATGGAAAAGATTGAGTGGCTTCCCACATCG
ATTGGCAAATTATCTGATATCACTGAATTGAACTTGTCTGAAAACCGAATTATGGCTCTC
CCATCCACCATGAGTGGCCTCAGAGCCCTAACAAAGCTTGATGTCCACTCAAACCAACTG
ATCAACCTTCCAGATTCAATTGGGGAATTGGTGAACCTAGCTGATCTCGATCTCCATGCA
AACAGATTAAGGTCACTGCCAGCTTCTTTTGGGAATCTGGTGAACCTCATCAATCTCAAT
TTGAGTTCAAATCAATTCACCCATTTGCCAGACAACATTGGGAGTCTAACAAGCTTGAAG
AGACTGAATGTGGATACAAATGAGCTCGAAGAAGTTCCTTATACAATTGGATCATGCACA
TCACTTTTGGAGCTGAGATTGGATTTCAATCAATTAAGAGCTCTTCCTGAGGCTGTTGGA
AAGCTTGAATGCTTGGAGATTCTTACGTTGCATTATAACAGAATCAAAGGGCTGCCAACA
ACAATTGGTAATCTTTCCAATTTGAGGGAACTTGATGTTAGCTTCAATGAACTTGAATCA
GTACCCGAAAACCTCTGCTTTGCGGTCAAGCTCAAGAAATTGAATGTGGGGAAGAACTTT
GCAGACTTGAGAGCCTTGCCAAGATCAATAGGGAATCTTGAGATGCTTGAAGAGTTGGAC
ATAAGTGACTGTCAAATAAGAATGCTACCGGATTCTTTTCGGTTCCTGTCTAAATTGAGA
GTTCTTCGTGCAGATGAGACTCCATTGGAGGTGCCACCAAGGGAAGTAACTAAACTTGGG
GCTCAGGAAGTTGTTCAGTACATGGCTGATCTGACCGCCAAGTGGGAGGCAAGACCCCTA
TCCTCAAAGAAGAAGGGGTTCTGGTTCTGGGTTTGCTCGATATTCAGAGCTAGAACCAAG
AGGACCACTGACAGCAAGGAATCACAAAAGCTTGATGAGTGA

Peptide Sequence

PEP ID

VIT_02s0012g01010.t01
PEP Infomation

pep chromosome:12X:2:6975111:6977453:-1 gene:VIT_02s0012g01010 transcript:VIT_02s0012g01010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAGMSKQDPSPAFAETVEEIMRIYRSLPPRPKIEEVEAAMTVIRTADCEEQKRLEEVARQ
EVPQGVPPELFSVLQQARKTMVLFQCHEEREEALHLVERNKLFNTFDELIQKASEVVSGG
VPIEKQIDLGDPVGKSGRKDVISVESLIKRGEDEESGADGFKGLVRSSSAKAIFVSGEDD
TEKFNLMKVAALIEKTAKIKAGVLDLQGKLMEKIEWLPTSIGKLSDITELNLSENRIMAL
PSTMSGLRALTKLDVHSNQLINLPDSIGELVNLADLDLHANRLRSLPASFGNLVNLINLN
LSSNQFTHLPDNIGSLTSLKRLNVDTNELEEVPYTIGSCTSLLELRLDFNQLRALPEAVG
KLECLEILTLHYNRIKGLPTTIGNLSNLRELDVSFNELESVPENLCFAVKLKKLNVGKNF
ADLRALPRSIGNLEMLEELDISDCQIRMLPDSFRFLSKLRVLRADETPLEVPPREVTKLG
AQEVVQYMADLTAKWEARPLSSKKKGFWFWVCSIFRARTKRTTDSKESQKLDE

Transcript Sequence

Transcript ID

VIT_02s0012g01010.t01
Transcript Infomation

cdna chromosome:12X:2:6975111:6977453:-1 gene:VIT_02s0012g01010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACCAAAGCCATGGCTGGGATGTCCAAGCAGGACCCATCACCGGCCTTTGCAGAAACAGTG
GAGGAGATCATGAGAATCTACAGATCACTACCACCAAGACCCAAAATTGAGGAGGTTGAA
GCAGCCATGACTGTTATCAGGACAGCGGACTGTGAAGAGCAGAAGAGGCTCGAGGAGGTT
GCAAGGCAAGAGGTCCCCCAGGGGGTCCCACCTGAGCTCTTCTCTGTTCTGCAGCAGGCG
AGGAAGACCATGGTGCTGTTTCAGTGCCATGAGGAGAGGGAAGAGGCTCTTCACTTGGTC
GAGAGGAATAAGCTGTTCAATACATTTGATGAGCTCATTCAGAAAGCTTCTGAGGTGGTT
TCCGGGGGTGTCCCGATTGAGAAGCAGATTGATTTGGGTGACCCAGTTGGGAAAAGTGGG
AGAAAAGATGTGATCAGTGTTGAGAGTTTGATTAAGAGGGGAGAAGATGAGGAATCGGGG
GCAGATGGTTTCAAGGGTTTGGTGAGGAGTTCTTCCGCGAAGGCCATTTTCGTTTCAGGT
GAGGACGATACCGAGAAGTTCAATCTCATGAAGGTGGCAGCCCTTATTGAAAAAACTGCT
AAAATCAAAGCAGGGGTTCTTGATCTTCAAGGCAAGTTGATGGAAAAGATTGAGTGGCTT
CCCACATCGATTGGCAAATTATCTGATATCACTGAATTGAACTTGTCTGAAAACCGAATT
ATGGCTCTCCCATCCACCATGAGTGGCCTCAGAGCCCTAACAAAGCTTGATGTCCACTCA
AACCAACTGATCAACCTTCCAGATTCAATTGGGGAATTGGTGAACCTAGCTGATCTCGAT
CTCCATGCAAACAGATTAAGGTCACTGCCAGCTTCTTTTGGGAATCTGGTGAACCTCATC
AATCTCAATTTGAGTTCAAATCAATTCACCCATTTGCCAGACAACATTGGGAGTCTAACA
AGCTTGAAGAGACTGAATGTGGATACAAATGAGCTCGAAGAAGTTCCTTATACAATTGGA
TCATGCACATCACTTTTGGAGCTGAGATTGGATTTCAATCAATTAAGAGCTCTTCCTGAG
GCTGTTGGAAAGCTTGAATGCTTGGAGATTCTTACGTTGCATTATAACAGAATCAAAGGG
CTGCCAACAACAATTGGTAATCTTTCCAATTTGAGGGAACTTGATGTTAGCTTCAATGAA
CTTGAATCAGTACCCGAAAACCTCTGCTTTGCGGTCAAGCTCAAGAAATTGAATGTGGGG
AAGAACTTTGCAGACTTGAGAGCCTTGCCAAGATCAATAGGGAATCTTGAGATGCTTGAA
GAGTTGGACATAAGTGACTGTCAAATAAGAATGCTACCGGATTCTTTTCGGTTCCTGTCT
AAATTGAGAGTTCTTCGTGCAGATGAGACTCCATTGGAGGTGCCACCAAGGGAAGTAACT
AAACTTGGGGCTCAGGAAGTTGTTCAGTACATGGCTGATCTGACCGCCAAGTGGGAGGCA
AGACCCCTATCCTCAAAGAAGAAGGGGTTCTGGTTCTGGGTTTGCTCGATATTCAGAGCT
AGAACCAAGAGGACCACTGACAGCAAGGAATCACAAAAGCTTGATGAGTGAATTCGCCCC
CCTTCAAGCATATCTGCTGATGAATTCTCCATAAGATGTCGTATACAATCAATTCATGAG
AGGGCAAAGCTTTCAACTTATGTTTTTGTTTGGTTTAAGAATAATCAGATACTGTTTGAC
ACAGCCTGCAGCCTTCTTATGTCTCTAGTGAACATGTAATATACTGGTTATACCTCTTCT
TTCCTGTAATCTTTTGTCTCAGATATGAACTCTTTTGAACTTTTT