Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_02s0012g00570.t01
CDS Infomation

cds chromosome:12X:2:6442242:6448260:-1 gene:VIT_02s0012g00570 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTTTGCACTGCTAATGATTTACAGGAGTGGAAGGATTTTCCTAAGGGACTTAGGGTC
CTTCTCCTTGATGATGACACTACTTCTGCTGCTGAGATAAGATCAAAGCTTGAGGAAATG
GACTATATTGTTTCTACATTCTGCAATGAGAATGAAGCTTTGTCAGCAATTTCAAGCAAA
CCTGAGAGCTTCCATGTTGCTATTGTAGAGGTCAGTACAGGCAACAATGGGAGTTTCAAG
TTTCTCGAAACTGCTAAGGATTTACCCACCATTATGATTTCAAGCATCCATTGCCTGAGC
ACCATGATGAAGTGCATAGCACTCGGTGCAGTTGAGTTCCTTCGAAAACCACTGTCCGAG
GACAAGCTCAGGAATATTTGGCAGCATGTAGTTCATAAGGCATTTAATGCAGGAGGGAGT
GTCCTTCCTGAATCACTAAAGCCCGTCAAAGAATCTGTGGCTTCCATGCTGCAGCTCCAA
ATGGAAAATGAAGAACCAAGGAATGAAAGCTCAGCAGAAACACTGAATGTGTCCAATGTC
CATGAAAATGACCATATGCAGTCAGCTGGAACTGATAAATACCCGGCACCTTCAACCCCA
CAATTAAAACAAGGAGGGAGATCATTGGATGATGGGGATTGCCTAGATCAAACTAACTGC
TCAACTGAGAAAGAGAGTGGGGAGCAGGATGGGGAATCTAAATCTGTCGAAACTACATGT
GGCACTTCAGTTGCTGAAGTTACTGCTCAGGTGTCTCCACCTCAAGGACTGGGCGAGAGC
GTTATCAAAGAGGAAGATGATTCAGCTGATGGCTGTAAGAGTGAAAGTAATATGTCTCCT
CATCCACAGAATAAAGACAGTCTCAGTGAGTTTGGTGGTGATGCTAGAAACCCCAGAAAG
GCATCTGGTGTTCATAGTCCTTGTGGGACAAGAGCCAATCGGAAGAAAATGAAGGTAGAC
TGGACGCCTGAACTGCACAAGAAATTTGTGCAGGCAGTGGAGCAGCTGGGTGTGGATCAA
GCCATTCCATCTCGAATATTAGAGCTGATGAAAGTGGAAGGCTTGACGAGGCATAATGTA
GCAAGTCATCTCCAGCAGAAATACAGAATGCATCGGAGACACATTCTGCCAAAGGAAGAT
GATAGAAGATGGCCTCATCAGAGAGACCCAATGCAGAGGAATTATTATCCACAGAAACCT
GTCATGGCCTTCCCTCCATATCATTCCAGTCACACCCTCCCAGCTGCTCAGCTCTACCCT
GTATGGGGCCAACCCAGCAGCCACCCTGCTCAGATGTGGAGCACACCTGGCTATCATACA
TGGCAGCCCGCAGAAAGTTGGATTTGGAAGCCTTATCCAGGGATGAATGCCGATGCATGG
GGCTGCCCTGTGATGACACCAACACATACTCCATGCTCTTCCTTTCCTCAAAATCCATCT
GGGTTTGATCATAATAATGGAAGTGGAATATACAACACTGGCATACCACAGAGCCCTATT
GACCTTTATCCGGCAGAGGAGTTAATTGACAGGGTAGTGAAGGAGGCAATAAGCAAGCCG
TGGATGCCACTGCCATTGGGCCTGAAACCGCCGGCCACCGAGAGCGTGCTGGCGGAGCTC
TCCCGCCAGGGCATCTCCACCATCCCACCTCACATCAACACCCCCCGTCCCTACTGA

Peptide Sequence

PEP ID

VIT_02s0012g00570.t01
PEP Infomation

pep chromosome:12X:2:6442242:6448260:-1 gene:VIT_02s0012g00570 transcript:VIT_02s0012g00570.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVCTANDLQEWKDFPKGLRVLLLDDDTTSAAEIRSKLEEMDYIVSTFCNENEALSAISSK
PESFHVAIVEVSTGNNGSFKFLETAKDLPTIMISSIHCLSTMMKCIALGAVEFLRKPLSE
DKLRNIWQHVVHKAFNAGGSVLPESLKPVKESVASMLQLQMENEEPRNESSAETLNVSNV
HENDHMQSAGTDKYPAPSTPQLKQGGRSLDDGDCLDQTNCSTEKESGEQDGESKSVETTC
GTSVAEVTAQVSPPQGLGESVIKEEDDSADGCKSESNMSPHPQNKDSLSEFGGDARNPRK
ASGVHSPCGTRANRKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNV
ASHLQQKYRMHRRHILPKEDDRRWPHQRDPMQRNYYPQKPVMAFPPYHSSHTLPAAQLYP
VWGQPSSHPAQMWSTPGYHTWQPAESWIWKPYPGMNADAWGCPVMTPTHTPCSSFPQNPS
GFDHNNGSGIYNTGIPQSPIDLYPAEELIDRVVKEAISKPWMPLPLGLKPPATESVLAEL
SRQGISTIPPHINTPRPY

Transcript Sequence

Transcript ID

VIT_02s0012g00570.t01
Transcript Infomation

cdna chromosome:12X:2:6442242:6448260:-1 gene:VIT_02s0012g00570 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GATGTTGGTACGAGGCGGTTCGCTACACTCGTCGGTGGCCTGAGAAAGGATGCCAAACCA
GCTATGGTTTGCACTGCTAATGATTTACAGGAGTGGAAGGATTTTCCTAAGGGACTTAGG
GTCCTTCTCCTTGATGATGACACTACTTCTGCTGCTGAGATAAGATCAAAGCTTGAGGAA
ATGGACTATATTGTTTCTACATTCTGCAATGAGAATGAAGCTTTGTCAGCAATTTCAAGC
AAACCTGAGAGCTTCCATGTTGCTATTGTAGAGGTCAGTACAGGCAACAATGGGAGTTTC
AAGTTTCTCGAAACTGCTAAGGATTTACCCACCATTATGATTTCAAGCATCCATTGCCTG
AGCACCATGATGAAGTGCATAGCACTCGGTGCAGTTGAGTTCCTTCGAAAACCACTGTCC
GAGGACAAGCTCAGGAATATTTGGCAGCATGTAGTTCATAAGGCATTTAATGCAGGAGGG
AGTGTCCTTCCTGAATCACTAAAGCCCGTCAAAGAATCTGTGGCTTCCATGCTGCAGCTC
CAAATGGAAAATGAAGAACCAAGGAATGAAAGCTCAGCAGAAACACTGAATGTGTCCAAT
GTCCATGAAAATGACCATATGCAGTCAGCTGGAACTGATAAATACCCGGCACCTTCAACC
CCACAATTAAAACAAGGAGGGAGATCATTGGATGATGGGGATTGCCTAGATCAAACTAAC
TGCTCAACTGAGAAAGAGAGTGGGGAGCAGGATGGGGAATCTAAATCTGTCGAAACTACA
TGTGGCACTTCAGTTGCTGAAGTTACTGCTCAGGTGTCTCCACCTCAAGGACTGGGCGAG
AGCGTTATCAAAGAGGAAGATGATTCAGCTGATGGCTGTAAGAGTGAAAGTAATATGTCT
CCTCATCCACAGAATAAAGACAGTCTCAGTGAGTTTGGTGGTGATGCTAGAAACCCCAGA
AAGGCATCTGGTGTTCATAGTCCTTGTGGGACAAGAGCCAATCGGAAGAAAATGAAGGTA
GACTGGACGCCTGAACTGCACAAGAAATTTGTGCAGGCAGTGGAGCAGCTGGGTGTGGAT
CAAGCCATTCCATCTCGAATATTAGAGCTGATGAAAGTGGAAGGCTTGACGAGGCATAAT
GTAGCAAGTCATCTCCAGCAGAAATACAGAATGCATCGGAGACACATTCTGCCAAAGGAA
GATGATAGAAGATGGCCTCATCAGAGAGACCCAATGCAGAGGAATTATTATCCACAGAAA
CCTGTCATGGCCTTCCCTCCATATCATTCCAGTCACACCCTCCCAGCTGCTCAGCTCTAC
CCTGTATGGGGCCAACCCAGCAGCCACCCTGCTCAGATGTGGAGCACACCTGGCTATCAT
ACATGGCAGCCCGCAGAAAGTTGGATTTGGAAGCCTTATCCAGGGATGAATGCCGATGCA
TGGGGCTGCCCTGTGATGACACCAACACATACTCCATGCTCTTCCTTTCCTCAAAATCCA
TCTGGGTTTGATCATAATAATGGAAGTGGAATATACAACACTGGCATACCACAGAGCCCT
ATTGACCTTTATCCGGCAGAGGAGTTAATTGACAGGGTAGTGAAGGAGGCAATAAGCAAG
CCGTGGATGCCACTGCCATTGGGCCTGAAACCGCCGGCCACCGAGAGCGTGCTGGCGGAG
CTCTCCCGCCAGGGCATCTCCACCATCCCACCTCACATCAACACCCCCCGTCCCTACTGA
ATCAGCACCATGCCACACATATCCCGCATCGGCTGCAGACGAAAAGTGGGACCACAAAGG
CATCTCTGAGGTGGAGGGTGGGACGGTTGACAAGGGGGCCGCGCATGTGAATTGGACGCC
ACAAATGAGATGTGTGGTTGTAAATAGAGACTAGTTGAGGCTTTTCTTGTTTTTTAATTG
GTGGGTGGGGGTGGGGTTGGTGTGCAAATAATAGAGAGAAAATGGAGGCGGTGGTGTTAT
GGTGGAAGGTGGCTGTTTTAGATAAGATGAGGGGTCTCGTCTGATGATATGAAGATGGGA
CTTTTTTTTTTTTGGTTTACATGTCTATTTTGAGAATCTAGATGTTGCTTTTCCTCGCTT
CCCCCAAATCCCACATCTAATCAACTTCATCTTTTCTATTAACATGCATTATTTGTTGGA
AAAAAACTAA