Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_02s0012g00080.t01
CDS Infomation

cds chromosome:12X:2:5692658:5701126:1 gene:VIT_02s0012g00080 gene_biotype:protein_coding transcript_biotype:protein_coding description:Casein kinase II subunit beta [Source:UniProtKB/TrEMBL;Acc:D7TTK4]
Sequence

ATGTACAGGGAAAGGGGTGTTGCCGCTGCTGGATCCAAGGCTGAGATGGCCTCAATTGAT
CGGAAGAGAATCAATGATGCGCTGGACAAGCACTTGGAGCGGTCGTCGCCTTCCACGTCC
AAGGGATTGAACGGCAAGGATAAGGACAGAGTATCGGCGCAGTCTACTCTGATAGAGGAA
TCTGAAACAGACACTGAAGAGTCAGATGTTAGTGGCTCTGATGGGGATGATGCATCATGG
ATCTCATGGTTTTGCCATATGCGAGGGCATGAGTTCTTCTGTGAAGTTGACGATGATTAC
ATCCAAGATGACTTTAACCTCTGTGGTTTGAGCAGTCAAGTTCCTTATTATGATTATGCA
CTTGACTTGATTTTGGATGTTGAATCCTCGCATGGTGATTCCTTCACAGAGGAACAAAAT
GAATTAGTGGAATCAGCAGCAGAGATGCTTTATGGTTTGATTCATGTCCGTTACATATTG
ACCAGCAAAGGACTGGCTGCAATGCTGGACAAGTACAAGGACTGTGACTTTGGTAGATGC
CCAAGAGTTTACTGCTGCGGACAAGCCTGCCTTCCAGTAGGTTTATCAGACATTCCTCGA
TCAAGCACAGTAAATGTCTACTGTCCCAAATGCGAAGATATTTACTATCCTCGTTCCAAG
TCCCAAGGTGACATTGATGGAGCCTATTTTGGAACCACATTTCCTCACCTGTTCTTGATG
ACATATGGGCACCTCAAACCACAAAAGGCATCTCAGAGCTATGTTCCTAGAGTATTTGGA
TTCAAGATGCACAAGCCTTAA

Peptide Sequence

PEP ID

VIT_02s0012g00080.t01
PEP Infomation

pep chromosome:12X:2:5692658:5701126:1 gene:VIT_02s0012g00080 transcript:VIT_02s0012g00080.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Casein kinase II subunit beta [Source:UniProtKB/TrEMBL;Acc:D7TTK4]
Sequence

MYRERGVAAAGSKAEMASIDRKRINDALDKHLERSSPSTSKGLNGKDKDRVSAQSTLIEE
SETDTEESDVSGSDGDDASWISWFCHMRGHEFFCEVDDDYIQDDFNLCGLSSQVPYYDYA
LDLILDVESSHGDSFTEEQNELVESAAEMLYGLIHVRYILTSKGLAAMLDKYKDCDFGRC
PRVYCCGQACLPVGLSDIPRSSTVNVYCPKCEDIYYPRSKSQGDIDGAYFGTTFPHLFLM
TYGHLKPQKASQSYVPRVFGFKMHKP

Transcript Sequence

Transcript ID

VIT_02s0012g00080.t01
Transcript Infomation

cdna chromosome:12X:2:5692658:5701126:1 gene:VIT_02s0012g00080 gene_biotype:protein_coding transcript_biotype:protein_coding description:Casein kinase II subunit beta [Source:UniProtKB/TrEMBL;Acc:D7TTK4]
Sequence

ATTCTCTCCCTCTCTCTCTCACTAGGATTTGAGGAGAGAGAAAATGGGTTAGTGTCTTCT
CTCTCTTTCTCTTCTCCATCCTCCCAAACCCTAGTTTCTCACTCTATAACGCTCTCCCTC
TATCACGCTCCAGTATGTGCATCTGAAATCTAGGGTTTCGGAGAGGAGCATGTACAGGGA
AAGGGGTGTTGCCGCTGCTGGATCCAAGGCTGAGATGGCCTCAATTGATCGGAAGAGAAT
CAATGATGCGCTGGACAAGCACTTGGAGCGGTCGTCGCCTTCCACGTCCAAGGGATTGAA
CGGCAAGGATAAGGACAGAGTATCGGCGCAGTCTACTCTGATAGAGGAATCTGAAACAGA
CACTGAAGAGTCAGATGTTAGTGGCTCTGATGGGGATGATGCATCATGGATCTCATGGTT
TTGCCATATGCGAGGGCATGAGTTCTTCTGTGAAGTTGACGATGATTACATCCAAGATGA
CTTTAACCTCTGTGGTTTGAGCAGTCAAGTTCCTTATTATGATTATGCACTTGACTTGAT
TTTGGATGTTGAATCCTCGCATGGTGATTCCTTCACAGAGGAACAAAATGAATTAGTGGA
ATCAGCAGCAGAGATGCTTTATGGTTTGATTCATGTCCGTTACATATTGACCAGCAAAGG
ACTGGCTGCAATGCTGGACAAGTACAAGGACTGTGACTTTGGTAGATGCCCAAGAGTTTA
CTGCTGCGGACAAGCCTGCCTTCCAGTAGGTTTATCAGACATTCCTCGATCAAGCACAGT
AAATGTCTACTGTCCCAAATGCGAAGATATTTACTATCCTCGTTCCAAGTCCCAAGGTGA
CATTGATGGAGCCTATTTTGGAACCACATTTCCTCACCTGTTCTTGATGACATATGGGCA
CCTCAAACCACAAAAGGCATCTCAGAGCTATGTTCCTAGAGTATTTGGATTCAAGATGCA
CAAGCCTTAATTCTGGAATTGCAAGTGACGTGGGAGCAATGTTCAAGCGCATTTGAATGC
TGGATTTACCAAGCTGACATTTGAGTGAGTTTTTGTCAGTCTGGAAACTTGGTGATTCTC
TTACTTTGCTTCTGTTTGGAAGTAATGATTTCAAGAATCTGAGTTCAAAGCTTCCCAAAA
ACATCACAAACTAGGTCCACCTTTTTTATGTTGAGGAAAATACAAAATAGCAAAATCTGG
TCTATATTGGGAGCTAGTATTTCTTTTCAATTTTTAGCTGATGTAAGCCTTGTTCTTTCT
TGATTAAGCGAGTATTTAAATTGTCTTTTAGCACCTTCCATCCAGATTTCTCTGTTCTAT
TTTCAGTTTCAAAATTGTCATCAAATGCACACAAAGGTTTACCATATGAATTCCATTATT
TTGCACTA