Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0244g00020.t01
CDS Infomation

cds chromosome:12X:1:21601504:21610319:1 gene:VIT_01s0244g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGATTGCTGTTCTTGGATTTTCCTGTAGAAGTTACCTCACTTTCCGTCGTCCTCTC
GTCTACTGCGTTCACAAGGTTCGACACCGCAGCAATGTTGCAACTGTTGAATCGCCTCCT
GAACCAGTGGGTGTTACGAAGGAAGAAGAACCTCATTGGGCTACTTCTGATGGAAGAGGT
AATGGTGCTTCTAAGGCACCTGAATGGAAGAAGTTGAATTCTAAAGACCTCGGGATTAGG
ACGTCGATGATTGCAAAGCCCACAAGATATGTTTTAAATGGACTTAAAAAAAAAGGATAT
GAAGTGTACCTTGTTGGAGGTTGTGTACGGGACCTTATCCTGAAGAGAACTCCTAAAGAC
TTTGACATCATAACTTCAGCTGAACTTAAGGAGGTACTGAGAGCATTTCCCCGATGTGAA
GTAGTTGGAAAGCGATTTCCCATATGCCATGTGCATGTCAATGATACCATTGTTGAGGTT
TCAAGTTTTAGCACTTCTGGAAAGAGAACCGGTAGGAAACTTGATTATATTCTCAGAAGA
CCTCCTGATTGTGATGATCATGATTATATTCGCTGGAGGAATTGTCTACAGCGGGACTTT
ACTATTAATGGGTTGATGTTTGATCCTTACACAAAGATAGTGTATGACTATATGGGTGGG
ATGCAAGATATCAAAAAAGCTAAAGTACGGACTGTAATCCCTGCTAATATTTCTTTTGTG
GAGGATTGCGCTCGCATTTTGCGTGGGGTTAGAATTGCAGCACGTTTAGGGTTTCGTTTC
ACTAAAGATATAGCTCATTCTGTAAGAGAGTTATCTTGCTCAGTGTTAAGACTTGATAAG
GGAAGGATACTCATGGAAATGAATTACATGCTAGCTTATGGGTCCGCAGAAGCTTCCTTG
AGGTTATTATGGAAATTTGGACTCCTGGAGATACTTCTACCCATACAAGCAGCATATCTT
GTTTCCCAAGGTTTTCGAAGACGTGATCAGAGATCAAACATGCTTTTGTCTTTGTTTTCA
AACCTGGATAGACTTGTGGCACCTGATCGGCCATGCCATAATAGCTTATGGATTGGTATG
TTAGCATTTCATAAGGCCTTGGTTGACCAACCTCGGCACCCCATGGTTGTTGCAGCATTC
AGCCTTGCTGTGCACAATGGTGGATCCTTGTCGGAAGCGGTGGAAATTGCAAGGAGAATC
TCCCAACCTCATGACCAGAGCTTCAGTGAATTATTAGAACCTCAGGATCTAGACTCGGAT
GAATCCTTGATAGACGAGATCATGGATCTTGCAGCATCGGTGAAATCTGCATTGATGAAG
ATGACAGATGAACATTTTGTTTCCCAAGCAATGAGCAAATACCCACGAGCACCATACTCA
GATCTGGTTTTTATCTCATTGGCATCATTCCTAAGAGCATCTAAGATCTTTCAGTGCGTA
CAAGGGGGTGCTGAGAAGGGATTCGTACCAAAACAAGGGAGTAGGATTGACTACGAATTC
TTAGCATTGGGAAGCCTTCGTGAGGTTCGGCATGTGTTTGCAAGGATCGTTTTTGACACC
GTTTACCCTCTAAGCCTCAACACAGAGGACAATTTTGTAAACCAAAATTCTTAG

Peptide Sequence

PEP ID

VIT_01s0244g00020.t01
PEP Infomation

pep chromosome:12X:1:21601504:21610319:1 gene:VIT_01s0244g00020 transcript:VIT_01s0244g00020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAIAVLGFSCRSYLTFRRPLVYCVHKVRHRSNVATVESPPEPVGVTKEEEPHWATSDGRG
NGASKAPEWKKLNSKDLGIRTSMIAKPTRYVLNGLKKKGYEVYLVGGCVRDLILKRTPKD
FDIITSAELKEVLRAFPRCEVVGKRFPICHVHVNDTIVEVSSFSTSGKRTGRKLDYILRR
PPDCDDHDYIRWRNCLQRDFTINGLMFDPYTKIVYDYMGGMQDIKKAKVRTVIPANISFV
EDCARILRGVRIAARLGFRFTKDIAHSVRELSCSVLRLDKGRILMEMNYMLAYGSAEASL
RLLWKFGLLEILLPIQAAYLVSQGFRRRDQRSNMLLSLFSNLDRLVAPDRPCHNSLWIGM
LAFHKALVDQPRHPMVVAAFSLAVHNGGSLSEAVEIARRISQPHDQSFSELLEPQDLDSD
ESLIDEIMDLAASVKSALMKMTDEHFVSQAMSKYPRAPYSDLVFISLASFLRASKIFQCV
QGGAEKGFVPKQGSRIDYEFLALGSLREVRHVFARIVFDTVYPLSLNTEDNFVNQNS

Transcript Sequence

Transcript ID

VIT_01s0244g00020.t01
Transcript Infomation

cdna chromosome:12X:1:21601504:21610319:1 gene:VIT_01s0244g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CCCTAAAAATCTCCAGATTCAAGCTTTGTATTGTGTACATTTCCAACGTTGTGAATCTTG
TGATATCGAAATCTCATCAATGGCGATTGCTGTTCTTGGATTTTCCTGTAGAAGTTACCT
CACTTTCCGTCGTCCTCTCGTCTACTGCGTTCACAAGGTTCGACACCGCAGCAATGTTGC
AACTGTTGAATCGCCTCCTGAACCAGTGGGTGTTACGAAGGAAGAAGAACCTCATTGGGC
TACTTCTGATGGAAGAGGTAATGGTGCTTCTAAGGCACCTGAATGGAAGAAGTTGAATTC
TAAAGACCTCGGGATTAGGACGTCGATGATTGCAAAGCCCACAAGATATGTTTTAAATGG
ACTTAAAAAAAAAGGATATGAAGTGTACCTTGTTGGAGGTTGTGTACGGGACCTTATCCT
GAAGAGAACTCCTAAAGACTTTGACATCATAACTTCAGCTGAACTTAAGGAGGTACTGAG
AGCATTTCCCCGATGTGAAGTAGTTGGAAAGCGATTTCCCATATGCCATGTGCATGTCAA
TGATACCATTGTTGAGGTTTCAAGTTTTAGCACTTCTGGAAAGAGAACCGGTAGGAAACT
TGATTATATTCTCAGAAGACCTCCTGATTGTGATGATCATGATTATATTCGCTGGAGGAA
TTGTCTACAGCGGGACTTTACTATTAATGGGTTGATGTTTGATCCTTACACAAAGATAGT
GTATGACTATATGGGTGGGATGCAAGATATCAAAAAAGCTAAAGTACGGACTGTAATCCC
TGCTAATATTTCTTTTGTGGAGGATTGCGCTCGCATTTTGCGTGGGGTTAGAATTGCAGC
ACGTTTAGGGTTTCGTTTCACTAAAGATATAGCTCATTCTGTAAGAGAGTTATCTTGCTC
AGTGTTAAGACTTGATAAGGGAAGGATACTCATGGAAATGAATTACATGCTAGCTTATGG
GTCCGCAGAAGCTTCCTTGAGGTTATTATGGAAATTTGGACTCCTGGAGATACTTCTACC
CATACAAGCAGCATATCTTGTTTCCCAAGGTTTTCGAAGACGTGATCAGAGATCAAACAT
GCTTTTGTCTTTGTTTTCAAACCTGGATAGACTTGTGGCACCTGATCGGCCATGCCATAA
TAGCTTATGGATTGGTATGTTAGCATTTCATAAGGCCTTGGTTGACCAACCTCGGCACCC
CATGGTTGTTGCAGCATTCAGCCTTGCTGTGCACAATGGTGGATCCTTGTCGGAAGCGGT
GGAAATTGCAAGGAGAATCTCCCAACCTCATGACCAGAGCTTCAGTGAATTATTAGAACC
TCAGGATCTAGACTCGGATGAATCCTTGATAGACGAGATCATGGATCTTGCAGCATCGGT
GAAATCTGCATTGATGAAGATGACAGATGAACATTTTGTTTCCCAAGCAATGAGCAAATA
CCCACGAGCACCATACTCAGATCTGGTTTTTATCTCATTGGCATCATTCCTAAGAGCATC
TAAGATCTTTCAGTGCGTACAAGGGGGTGCTGAGAAGGGATTCGTACCAAAACAAGGGAG
TAGGATTGACTACGAATTCTTAGCATTGGGAAGCCTTCGTGAGGTTCGGCATGTGTTTGC
AAGGATCGTTTTTGACACCGTTTACCCTCTAAGCCTCAACACAGAGGACAATTTTGTAAA
CCAAAATTCTTAGTCAATTAATATTATGGAGCAAAGCTTGTCTCAAATCTCATATTTTTT
TTATAAATCAAATGTTATAATATTAATTCGTTTTATCCTCA