Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0182g00160.t01
CDS Infomation

cds chromosome:12X:1:14246016:14249288:1 gene:VIT_01s0182g00160 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCGTGATAAAATCTGGGAGTGGGGCTATGAGCTTCACCAAGGCTCTGGCTGTTTCT
TTGATATCTCTGCCTTTTCTCTTCACACTCTTCGTTCTCTACCGGAACCCACCTTCTGAT
CCAACCCCAGATTTCAGAGAAGCTAGGGTTTTGGACGTGCCACCCAGGATTGTTAATGCG
TTGAAACTGGGTACGAAAACAGTATTCAATGGTCCAGAAGATAATTCCTCTCAACCTGCT
GACATGTCTAAAGACAGTCTGCTTGGTGGGCTTCTTGCTGCTGGATTTGGCGAAAAATCT
TGCTTAAGCAGGTACCAGTCTGCCTTGTATCGAAAAATTTCACCTTATAAGCCTTCTTCC
TATCTTCTTTCCAGATTGCGGAAGTATGAAGACCTCCATAAACATTGTGGACCCCATACC
AAATCCTACAGGAAAACCATAAAACTACTCAAGTCTGGCCACAGTGTTGGCCCAACAGAT
TGTAACTATGTTGTGTGGATATCTTACAGTGGCTTAGGGAACAGGATCCTCACCCTGGCT
TCTGCATTCCTTTATGCTCTTCTCACAAACCGTGTCCTGCTTGTTGACCGGGGAAAAGAC
ATGGCTGATCTATTCTGTGAGCCATTTCCTGAAAAATCATGGTTACTGCCCCTGGACTTT
CCCCTACTGCCTAAATTCAACAGCATTAACAAAGAATCTCCTCATTGTTTTGGGAAGATG
CTGAAGAATAATATCATAAATTCCTCAACAGAACAACCGCCACCATTTTTATATATCTAC
CTGAGTCACGATTATGGTGATCATGATAAGCTTTTCTTCTGTGATCAGGAACAAACCCTT
CTTGGGAAAGTCCCTTGGTTGATCATGAAGACTAATAACTACTTTGTCCCATCTCTCTTC
TTGATGCCTTCTTTTGAACAAGAACTAAGCAAATTATTCCCAGAAAAGGAAACTACTTTC
CATCACTTGGGTCGGTATCTTTTCCACCCTTCAAATCAAGTATGGGGACTGATCACAAGG
TTCTATAAAGCTTACTTGGCTGAATCAAATGAGAGGATTGGCATCCAAATAAGGACTTTT
GACTCTGGAACTGCTCCTTTCCAATATGTGATTGATCAAATCATGGCATGCACTCTAAAG
GAGAAACTGCTGCCTGAAGTCAATAGACAAGAAACTTTTGTTACCCCAGCTGAAAACCAG
AAATCAATAGCTGTTCTAATGACATCTTTAAATTCTGGGTACTCTGAGGCTGTGAGGAAC
ATGTATTGGGAGCAGTCAGCCATGAGTGGGGAGGTGGTCAGCGTATACCAGCCAAGCCAT
GAGGAAGTCCAACAGAGTGAGAAGCAGGGGCACAACAGGAAGGCATGGGCAGAAATGTAT
CTCCTAAGTACGACTGAGGCATTGATAACCAGCGCATGGTCAACCTTTGGCTATGTGGCT
CAGGGTCTTGGAGGTGTGACGCCTTGGATTCTGTACAAGCCTCAAAATCGGACAGCTCCT
GATCCACCTTGTGGCAGGGCAATGTCAATGGAGCCATGCTTTCATGCCCCTCCCTTCTAT
GACTGTAAGGCGAAGACAGGAGTCGATACTGGTGCGCTTGTTCCTCATGTAAGACACTGT
GAAGACATGAGCTGGGGCCTCAAGCTGGTTGGTAGACATAGAGAGTTGTAG

Peptide Sequence

PEP ID

VIT_01s0182g00160.t01
PEP Infomation

pep chromosome:12X:1:14246016:14249288:1 gene:VIT_01s0182g00160 transcript:VIT_01s0182g00160.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAVIKSGSGAMSFTKALAVSLISLPFLFTLFVLYRNPPSDPTPDFREARVLDVPPRIVNA
LKLGTKTVFNGPEDNSSQPADMSKDSLLGGLLAAGFGEKSCLSRYQSALYRKISPYKPSS
YLLSRLRKYEDLHKHCGPHTKSYRKTIKLLKSGHSVGPTDCNYVVWISYSGLGNRILTLA
SAFLYALLTNRVLLVDRGKDMADLFCEPFPEKSWLLPLDFPLLPKFNSINKESPHCFGKM
LKNNIINSSTEQPPPFLYIYLSHDYGDHDKLFFCDQEQTLLGKVPWLIMKTNNYFVPSLF
LMPSFEQELSKLFPEKETTFHHLGRYLFHPSNQVWGLITRFYKAYLAESNERIGIQIRTF
DSGTAPFQYVIDQIMACTLKEKLLPEVNRQETFVTPAENQKSIAVLMTSLNSGYSEAVRN
MYWEQSAMSGEVVSVYQPSHEEVQQSEKQGHNRKAWAEMYLLSTTEALITSAWSTFGYVA
QGLGGVTPWILYKPQNRTAPDPPCGRAMSMEPCFHAPPFYDCKAKTGVDTGALVPHVRHC
EDMSWGLKLVGRHREL

Transcript Sequence

Transcript ID

VIT_01s0182g00160.t01
Transcript Infomation

cdna chromosome:12X:1:14246016:14249288:1 gene:VIT_01s0182g00160 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCGTGATAAAATCTGGGAGTGGGGCTATGAGCTTCACCAAGGCTCTGGCTGTTTCT
TTGATATCTCTGCCTTTTCTCTTCACACTCTTCGTTCTCTACCGGAACCCACCTTCTGAT
CCAACCCCAGATTTCAGAGAAGCTAGGGTTTTGGACGTGCCACCCAGGATTGTTAATGCG
TTGAAACTGGGTACGAAAACAGTATTCAATGGTCCAGAAGATAATTCCTCTCAACCTGCT
GACATGTCTAAAGACAGTCTGCTTGGTGGGCTTCTTGCTGCTGGATTTGGCGAAAAATCT
TGCTTAAGCAGGTACCAGTCTGCCTTGTATCGAAAAATTTCACCTTATAAGCCTTCTTCC
TATCTTCTTTCCAGATTGCGGAAGTATGAAGACCTCCATAAACATTGTGGACCCCATACC
AAATCCTACAGGAAAACCATAAAACTACTCAAGTCTGGCCACAGTGTTGGCCCAACAGAT
TGTAACTATGTTGTGTGGATATCTTACAGTGGCTTAGGGAACAGGATCCTCACCCTGGCT
TCTGCATTCCTTTATGCTCTTCTCACAAACCGTGTCCTGCTTGTTGACCGGGGAAAAGAC
ATGGCTGATCTATTCTGTGAGCCATTTCCTGAAAAATCATGGTTACTGCCCCTGGACTTT
CCCCTACTGCCTAAATTCAACAGCATTAACAAAGAATCTCCTCATTGTTTTGGGAAGATG
CTGAAGAATAATATCATAAATTCCTCAACAGAACAACCGCCACCATTTTTATATATCTAC
CTGAGTCACGATTATGGTGATCATGATAAGCTTTTCTTCTGTGATCAGGAACAAACCCTT
CTTGGGAAAGTCCCTTGGTTGATCATGAAGACTAATAACTACTTTGTCCCATCTCTCTTC
TTGATGCCTTCTTTTGAACAAGAACTAAGCAAATTATTCCCAGAAAAGGAAACTACTTTC
CATCACTTGGGTCGGTATCTTTTCCACCCTTCAAATCAAGTATGGGGACTGATCACAAGG
TTCTATAAAGCTTACTTGGCTGAATCAAATGAGAGGATTGGCATCCAAATAAGGACTTTT
GACTCTGGAACTGCTCCTTTCCAATATGTGATTGATCAAATCATGGCATGCACTCTAAAG
GAGAAACTGCTGCCTGAAGTCAATAGACAAGAAACTTTTGTTACCCCAGCTGAAAACCAG
AAATCAATAGCTGTTCTAATGACATCTTTAAATTCTGGGTACTCTGAGGCTGTGAGGAAC
ATGTATTGGGAGCAGTCAGCCATGAGTGGGGAGGTGGTCAGCGTATACCAGCCAAGCCAT
GAGGAAGTCCAACAGAGTGAGAAGCAGGGGCACAACAGGAAGGCATGGGCAGAAATGTAT
CTCCTAAGTACGACTGAGGCATTGATAACCAGCGCATGGTCAACCTTTGGCTATGTGGCT
CAGGGTCTTGGAGGTGTGACGCCTTGGATTCTGTACAAGCCTCAAAATCGGACAGCTCCT
GATCCACCTTGTGGCAGGGCAATGTCAATGGAGCCATGCTTTCATGCCCCTCCCTTCTAT
GACTGTAAGGCGAAGACAGGAGTCGATACTGGTGCGCTTGTTCCTCATGTAAGACACTGT
GAAGACATGAGCTGGGGCCTCAAGCTGGTTGGTAGACATAGAGAGTTGTAGTTGCAGTCT
TTATGTCGAAATTCATCAATCTCTTATGGTTTTGGCCGTAGAATAAAAT