Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0150g00460.t01
CDS Infomation

cds chromosome:12X:1:22826415:22828725:1 gene:VIT_01s0150g00460 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:F6HJ88]
Sequence

ATGCTTACTACACTTCCTCAGTCTCTCCCTCTCGGAACAAAAATGGCTTCTTGCCTGTGG
CTTCTCTCTCTGGGTTTACTGTTTATGGTCTCTGGAGCAAGGGGTGCTGCTCCAAGGAAG
CCTATCGATGTGCCATTCGGTAGAAACTATGTGCCTACATGGGCTTTTGACCACATCAAG
TCCTACAATGGAGGCTCTGAGATTCAGCTCGTCCTTGACAAATACACAGGTACTGGCTTC
CAATCCAAGGGGTCTTACTTGTTCGGCCACTTCAGTATGCAAATAAAGATGGTTCCAGGG
GATTCTGCGGGAACTGTAACTGCTTTCTATCTGTCTTCTCAAAACTCAGAGCATGATGAA
ATAGACTTTGAGTTCTTGGGGAACAGGTCCGGCCAACCCTACATTTTACAGACAAATGTC
TTCACGGGAGGAAAAGGAGACAGAGAGCAGAGAATCTATCTTTGGTTTGACCCAACCAAA
GCTTTTCACTCATACTCAGTTCTATGGAATACGTTTCTGATAATATTCTTGGTGGACGAT
GTCCCAATAAGAGTGTTCAAGAACAGCAAAGATTTGGGAGTTAAGTTTCCATTCGACCAA
CCCATGAAGATATACTCAAGCCTGTGGAATGCGGATGACTGGGCCACAAGGGGTGGGCTG
GAGAAGACCGACTGGTCCAAGGCTCCATTTGTGGCTTCGTACAAGAGTTTCCACGTGGAT
GGGTGTGAGGCTTCAGTGGAAGCCAAATTTTGTGCGACCCAGGGCAAGAGATGGTGGGAC
CAAAGGGAATTTCAAGATCTCGACTCCCTTCAGTACAGGAGACTCGCCTGGGTCCGCCAG
AAATACACCATCTACAACTACTGCACTGACCGAGTTAGATACCCCACCATGCCACCTGAA
TGCAAGAGAGACAGAGACGTTTAG

Peptide Sequence

PEP ID

VIT_01s0150g00460.t01
PEP Infomation

pep chromosome:12X:1:22826415:22828725:1 gene:VIT_01s0150g00460 transcript:VIT_01s0150g00460.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:F6HJ88]
Sequence

MLTTLPQSLPLGTKMASCLWLLSLGLLFMVSGARGAAPRKPIDVPFGRNYVPTWAFDHIK
SYNGGSEIQLVLDKYTGTGFQSKGSYLFGHFSMQIKMVPGDSAGTVTAFYLSSQNSEHDE
IDFEFLGNRSGQPYILQTNVFTGGKGDREQRIYLWFDPTKAFHSYSVLWNTFLIIFLVDD
VPIRVFKNSKDLGVKFPFDQPMKIYSSLWNADDWATRGGLEKTDWSKAPFVASYKSFHVD
GCEASVEAKFCATQGKRWWDQREFQDLDSLQYRRLAWVRQKYTIYNYCTDRVRYPTMPPE
CKRDRDV

Transcript Sequence

Transcript ID

VIT_01s0150g00460.t01
Transcript Infomation

cdna chromosome:12X:1:22826415:22828725:1 gene:VIT_01s0150g00460 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:F6HJ88]
Sequence

ATCCATTTCTCCACATGCTTACTACACTTCCTCAGTCTCTCCCTCTCGGAACAAAAATGG
CTTCTTGCCTGTGGCTTCTCTCTCTGGGTTTACTGTTTATGGTCTCTGGAGCAAGGGGTG
CTGCTCCAAGGAAGCCTATCGATGTGCCATTCGGTAGAAACTATGTGCCTACATGGGCTT
TTGACCACATCAAGTCCTACAATGGAGGCTCTGAGATTCAGCTCGTCCTTGACAAATACA
CAGGTACTGGCTTCCAATCCAAGGGGTCTTACTTGTTCGGCCACTTCAGTATGCAAATAA
AGATGGTTCCAGGGGATTCTGCGGGAACTGTAACTGCTTTCTATCTGTCTTCTCAAAACT
CAGAGCATGATGAAATAGACTTTGAGTTCTTGGGGAACAGGTCCGGCCAACCCTACATTT
TACAGACAAATGTCTTCACGGGAGGAAAAGGAGACAGAGAGCAGAGAATCTATCTTTGGT
TTGACCCAACCAAAGCTTTTCACTCATACTCAGTTCTATGGAATACGTTTCTGATAATAT
TCTTGGTGGACGATGTCCCAATAAGAGTGTTCAAGAACAGCAAAGATTTGGGAGTTAAGT
TTCCATTCGACCAACCCATGAAGATATACTCAAGCCTGTGGAATGCGGATGACTGGGCCA
CAAGGGGTGGGCTGGAGAAGACCGACTGGTCCAAGGCTCCATTTGTGGCTTCGTACAAGA
GTTTCCACGTGGATGGGTGTGAGGCTTCAGTGGAAGCCAAATTTTGTGCGACCCAGGGCA
AGAGATGGTGGGACCAAAGGGAATTTCAAGATCTCGACTCCCTTCAGTACAGGAGACTCG
CCTGGGTCCGCCAGAAATACACCATCTACAACTACTGCACTGACCGAGTTAGATACCCCA
CCATGCCACCTGAATGCAAGAGAGACAGAGACGTTTAGACCCTTCTACTAATACTAATAC
TAATACCACTGCTACTACTATTATCTCTCTCGCTTATTGCTTTGTTCCATTCATAGTTCT
TTGGGATTTGCCTCTTATTACTATGCTCTCATCTTCATCTCTACCATGTATTTGATTGCT
GTAATTTTTAAAATTCAATGTATGTCCTCTATATGCATGCCCA