Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0146g00450.t01
CDS Infomation

cds chromosome:12X:1:22308498:22311372:-1 gene:VIT_01s0146g00450 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACGTATTTTCCAGCGGAGGTTTTAGAGCGGATATTCGCACTGCTCACGTCCCAGAGA
GACCGGAACAGCGTGTGTCTGGTCTGTAAGTACTGGTGGAAGGTGGAGGCTGGATGCAGA
TTGAGGGTTTCTGTGAAGAATTGTTATGCTTTGGGGCCTAATAGGGTTTTGGCGAGGTTT
CCAAGGATGAGGGCTTTGAGCCTGAAGGGAAAGCCCCATTTTGCTGGTTTGAACATGGTG
AATTGGGGTGGTTTTGCTTTGCCTTGGATTGAGTTCTTCGCCAAGAATTGTCCATGGCTA
CAAGAGCTTCGATTGAAGAGGATGGTTGTTTCCGATCAGAGTCTTCAAATGATTTCTCTT
TCCTTTTCGGAGTTTGAGTCTCTGTCTTTGATCCGCTGTGGAGGGTTCAGCCCTGTTGGG
CTTGCAGCCATTGCTTCCAATTGCAGGTTTCTTAAAGAGCTGGTATTGCTGGAAAATGAA
GTTGAAGAGGACATAGGCCATATACTTGGTGTTGGGGTTGGAGATGGCATAGGCCAGTGG
CTTAGTTGCTTTCCTGAAAGCTGCTCGTCTCTTGTCTCCCTGAATTTTGCATGTACTAAA
GGAGTAGTGAATTTGGAAGCTCTTGAGAAACTGGTTGCTAGATGTCCAAACCTCAGGAGC
CTGCGGTTAAACCGCCGAGTGCCACCTAATGTTCTCCAGAGACTCCTGCAGCAGGCACCT
CAACTGGAGGACTTGGGGATAGGGTCTTTTTCCAACTACACAGACCGGAGAACTTACTTG
AGACTGCAGAATGCTGTGTCGAAATGTCGATCAATCCGGAGCCTATCTGGTTTTTCATCG
TTTACCCCTCTGTATCAGGCTGCTATTTACCCTATGTGCTCAAACCTGATTTCCTTGAAC
CTGAGCAAAGCAGTAGAGCTTCCAGCTCACAGTCTCATGGAGATAATTTCCCGCTGCAAA
AAACTTCAAAATCTTTGGGTCTTGGATAATATTGGCGACAAGGGGCTAGGATTAGTGGCT
GATACTTGTAAAAACCTTCAAGTGTTGAGGGTATTTCGACTTGGTTCCCATAATGAAGGG
AATCCAGCTCTAACTGAAGAAGGTCTAATTGCTATATCCATGGGTTGCCCTCAACTTCAT
TCTTTGGTATATTGCTGTGATCAGATGACAAATGCTTCCCTAATAACTGTTGCCAGAAAC
TGTCCTAATCTCACCAACTTCAAATTATGCATCAATGACCCAAAGACGCCTGATCATACA
ACTTCACAACCTTTTGATGAAGGCTTTGGGGCAATCGTTCAGTCATGCAAGGGGCTCAGA
CGGCTGTCACTGTCTGGCCTTCTAAGTGACCAAGTTTTCCTCTACATTGGAATGTATGCA
GAGCAGTTAGAAATGCTTTCAATTGGATCTTCTGGGGGAGGTGATAAAGAATTATCCTAT
GTCTTAAATGGTTGTAGGAACCTCATGAAATTGGAGATCAAGGGCAGTCCCTTTGTTGAT
GCTGGACTCCTGGAAGAGATAGTGAAGCATGAAAAAATACGATGCCTCTGGATTTCATCC
TCCAAAGTTACTCTTGGAGGATGCAGGGCACTCTCAATGCAGGTGCCCATGATGAACATA
GAGATCATAGGGGAAAACAACAAGATGAAGAAGGATGATGATCATAAGGTCGGGAAAATG
TACCTCTACCGAACCCTCAATGGACCCAGAAAAGATGCACCAGCTTCTGTTTGGACTCTG
TAA

Peptide Sequence

PEP ID

VIT_01s0146g00450.t01
PEP Infomation

pep chromosome:12X:1:22308498:22311372:-1 gene:VIT_01s0146g00450 transcript:VIT_01s0146g00450.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTYFPAEVLERIFALLTSQRDRNSVCLVCKYWWKVEAGCRLRVSVKNCYALGPNRVLARF
PRMRALSLKGKPHFAGLNMVNWGGFALPWIEFFAKNCPWLQELRLKRMVVSDQSLQMISL
SFSEFESLSLIRCGGFSPVGLAAIASNCRFLKELVLLENEVEEDIGHILGVGVGDGIGQW
LSCFPESCSSLVSLNFACTKGVVNLEALEKLVARCPNLRSLRLNRRVPPNVLQRLLQQAP
QLEDLGIGSFSNYTDRRTYLRLQNAVSKCRSIRSLSGFSSFTPLYQAAIYPMCSNLISLN
LSKAVELPAHSLMEIISRCKKLQNLWVLDNIGDKGLGLVADTCKNLQVLRVFRLGSHNEG
NPALTEEGLIAISMGCPQLHSLVYCCDQMTNASLITVARNCPNLTNFKLCINDPKTPDHT
TSQPFDEGFGAIVQSCKGLRRLSLSGLLSDQVFLYIGMYAEQLEMLSIGSSGGGDKELSY
VLNGCRNLMKLEIKGSPFVDAGLLEEIVKHEKIRCLWISSSKVTLGGCRALSMQVPMMNI
EIIGENNKMKKDDDHKVGKMYLYRTLNGPRKDAPASVWTL

Transcript Sequence

Transcript ID

VIT_01s0146g00450.t01
Transcript Infomation

cdna chromosome:12X:1:22308498:22311372:-1 gene:VIT_01s0146g00450 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACGTATTTTCCAGCGGAGGTTTTAGAGCGGATATTCGCACTGCTCACGTCCCAGAGA
GACCGGAACAGCGTGTGTCTGGTCTGTAAGTACTGGTGGAAGGTGGAGGCTGGATGCAGA
TTGAGGGTTTCTGTGAAGAATTGTTATGCTTTGGGGCCTAATAGGGTTTTGGCGAGGTTT
CCAAGGATGAGGGCTTTGAGCCTGAAGGGAAAGCCCCATTTTGCTGGTTTGAACATGGTG
AATTGGGGTGGTTTTGCTTTGCCTTGGATTGAGTTCTTCGCCAAGAATTGTCCATGGCTA
CAAGAGCTTCGATTGAAGAGGATGGTTGTTTCCGATCAGAGTCTTCAAATGATTTCTCTT
TCCTTTTCGGAGTTTGAGTCTCTGTCTTTGATCCGCTGTGGAGGGTTCAGCCCTGTTGGG
CTTGCAGCCATTGCTTCCAATTGCAGGTTTCTTAAAGAGCTGGTATTGCTGGAAAATGAA
GTTGAAGAGGACATAGGCCATATACTTGGTGTTGGGGTTGGAGATGGCATAGGCCAGTGG
CTTAGTTGCTTTCCTGAAAGCTGCTCGTCTCTTGTCTCCCTGAATTTTGCATGTACTAAA
GGAGTAGTGAATTTGGAAGCTCTTGAGAAACTGGTTGCTAGATGTCCAAACCTCAGGAGC
CTGCGGTTAAACCGCCGAGTGCCACCTAATGTTCTCCAGAGACTCCTGCAGCAGGCACCT
CAACTGGAGGACTTGGGGATAGGGTCTTTTTCCAACTACACAGACCGGAGAACTTACTTG
AGACTGCAGAATGCTGTGTCGAAATGTCGATCAATCCGGAGCCTATCTGGTTTTTCATCG
TTTACCCCTCTGTATCAGGCTGCTATTTACCCTATGTGCTCAAACCTGATTTCCTTGAAC
CTGAGCAAAGCAGTAGAGCTTCCAGCTCACAGTCTCATGGAGATAATTTCCCGCTGCAAA
AAACTTCAAAATCTTTGGGTCTTGGATAATATTGGCGACAAGGGGCTAGGATTAGTGGCT
GATACTTGTAAAAACCTTCAAGTGTTGAGGGTATTTCGACTTGGTTCCCATAATGAAGGG
AATCCAGCTCTAACTGAAGAAGGTCTAATTGCTATATCCATGGGTTGCCCTCAACTTCAT
TCTTTGGTATATTGCTGTGATCAGATGACAAATGCTTCCCTAATAACTGTTGCCAGAAAC
TGTCCTAATCTCACCAACTTCAAATTATGCATCAATGACCCAAAGACGCCTGATCATACA
ACTTCACAACCTTTTGATGAAGGCTTTGGGGCAATCGTTCAGTCATGCAAGGGGCTCAGA
CGGCTGTCACTGTCTGGCCTTCTAAGTGACCAAGTTTTCCTCTACATTGGAATGTATGCA
GAGCAGTTAGAAATGCTTTCAATTGGATCTTCTGGGGGAGGTGATAAAGAATTATCCTAT
GTCTTAAATGGTTGTAGGAACCTCATGAAATTGGAGATCAAGGGCAGTCCCTTTGTTGAT
GCTGGACTCCTGGAAGAGATAGTGAAGCATGAAAAAATACGATGCCTCTGGATTTCATCC
TCCAAAGTTACTCTTGGAGGATGCAGGGCACTCTCAATGCAGGTGCCCATGATGAACATA
GAGATCATAGGGGAAAACAACAAGATGAAGAAGGATGATGATCATAAGGTCGGGAAAATG
TACCTCTACCGAACCCTCAATGGACCCAGAAAAGATGCACCAGCTTCTGTTTGGACTCTG
TAATGGCCTCCTGCATTCTCTTGAAGAAGTTGGGAGTTCTTTTGCTCTGAAGGTAGTTGC
CGAGTTCCTTATCAGACTACTATTTACCCCTTTTTTTTCTCCAATTTTCTGAATTATATG
GTAGTGAATCAGAACCATAATCATCTGGGCATATTGTTCCTGAAACTCTTGTTAATATCA
TTTCTGTGGTTCTTGTTCCTGAACTCTTGGCTCCTTCCATGTTGAAACCATAAGTAAAAA
TAATGTGTTTTCTCT