Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0146g00170.t01
CDS Infomation

cds chromosome:12X:1:21945798:21956809:-1 gene:VIT_01s0146g00170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGACGAAGAGCAGCTCAGTCACGTTGCTCCACAATGCTTTGATCGTGACAATGGAT
TCCGAGACTCGAGTGTTCTACAACGGCGCGATCGTCGTCGAAAAAGATCGAATCATAGCC
CTAGGTCAATCTCACAACATCTTCAACCAATTCGCTCCTCTTGCTCAGAACGTCTTCGAC
CTTCACGGCCAAATTCTACTTCCAGGATTCATCAACACTCATGTTCACACCTCTCAACAG
CTTGGCAGAGGAATAGCCGATGATGTTGATCTGATGACTTGGTTGCATGAACGGATTTGG
CCTTATGAATCCAACATGACTGAGGAGGATTCCTACATTTCAACTTTACTCTGCGGGATC
GAGCTCATTCACTCTGGTGTAACTTGTTTCGCCGAAGCTGGAGGGCAACATGTATCAGAA
ATGGCAAGAGCAGTGGAATTACTGGGGTTACGTGCATGTCTAGTGCAGTCAACTATGGAT
TCTGGCCAGGGTTTGCCACCATCTTGGGCAGATCGAACTACAGATGATTGTATTCAGTCT
CAGAAGGAACTTTACGAGAAGCATCATGATACTGCAGATGGGCGCATCAGAATATGGCTT
GGAATAAGGCAAATTATGAATGCAACTGATCGTTTACTACTTGAAACAAGAGATGTAGCT
AAAGAACTAAAAACTGGAATCCACATGCATGTTGCAGAGATATCCTATGAAAATCAAGTT
GTGAAAGATACTCGAAAAGTTGATTATGGAACAGTTTCATACTTGGAGAAGATAGATCTC
CTAAATGGCAATTTGCTGGCAGCTCATACTGTTTGGGTCAATGACACTGAGATTGGTTTT
CTTTCAAGAGCTGGTGTTAAAGTATCTCACTGTCCTGCTTCTGCAATGCGGATGCTAGGA
TTTGCACCTATTAAGGAAATGCTTGATGCTGGAATTTGTGTCTCATTGGGAACAGATGGC
GCACCATCAAATAACAGAATGAGCATTGTTGATGACATGTACCTTGCTTCTCTGATTAAC
AAAGGACGGGAAGTTTATAAACTTGGAACAACAGATCCCACTGCTCTCCCTGCTGAAACA
ATCCTCAAGATGGCAACAATCAATGGTGCAAAAACAGTACTCTGGGAAAACGAAATAGGT
TCACTTGAGATCGGGAAAAAGGCTGACATGATCATAATCAATCCTTTCTCTTGGTCTATG
GCTCCTGTTCATGACTGCATTTCCAGCCTTGTGTATAGCATGCGATCTGAAAATATTGTC
TCAGTCATGTGCAATGGCCAGTGGATCATGAAGGATGGAAAGATCTTGAACGTGAATGAG
GGAGAAGTTATTTCAATGGCAAGGAAAGCTTCAAGTGAACTTCTGAAGAGGGCGGGCATT
AGAATTCCTAAGAGAATGAATATGATTTGA

Peptide Sequence

PEP ID

VIT_01s0146g00170.t01
PEP Infomation

pep chromosome:12X:1:21945798:21956809:-1 gene:VIT_01s0146g00170 transcript:VIT_01s0146g00170.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

METKSSSVTLLHNALIVTMDSETRVFYNGAIVVEKDRIIALGQSHNIFNQFAPLAQNVFD
LHGQILLPGFINTHVHTSQQLGRGIADDVDLMTWLHERIWPYESNMTEEDSYISTLLCGI
ELIHSGVTCFAEAGGQHVSEMARAVELLGLRACLVQSTMDSGQGLPPSWADRTTDDCIQS
QKELYEKHHDTADGRIRIWLGIRQIMNATDRLLLETRDVAKELKTGIHMHVAEISYENQV
VKDTRKVDYGTVSYLEKIDLLNGNLLAAHTVWVNDTEIGFLSRAGVKVSHCPASAMRMLG
FAPIKEMLDAGICVSLGTDGAPSNNRMSIVDDMYLASLINKGREVYKLGTTDPTALPAET
ILKMATINGAKTVLWENEIGSLEIGKKADMIIINPFSWSMAPVHDCISSLVYSMRSENIV
SVMCNGQWIMKDGKILNVNEGEVISMARKASSELLKRAGIRIPKRMNMI

Transcript Sequence

Transcript ID

VIT_01s0146g00170.t01
Transcript Infomation

cdna chromosome:12X:1:21945798:21956809:-1 gene:VIT_01s0146g00170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCGGTCGTCAGTCAGAGTTGGGTCGAAACGGTCTGTTTTCTGTCATTTGTGCAGAAGCAG
CAAGCAGAGGAAGCGATGGAGACGAAGAGCAGCTCAGTCACGTTGCTCCACAATGCTTTG
ATCGTGACAATGGATTCCGAGACTCGAGTGTTCTACAACGGCGCGATCGTCGTCGAAAAA
GATCGAATCATAGCCCTAGGTCAATCTCACAACATCTTCAACCAATTCGCTCCTCTTGCT
CAGAACGTCTTCGACCTTCACGGCCAAATTCTACTTCCAGGATTCATCAACACTCATGTT
CACACCTCTCAACAGCTTGGCAGAGGAATAGCCGATGATGTTGATCTGATGACTTGGTTG
CATGAACGGATTTGGCCTTATGAATCCAACATGACTGAGGAGGATTCCTACATTTCAACT
TTACTCTGCGGGATCGAGCTCATTCACTCTGGTGTAACTTGTTTCGCCGAAGCTGGAGGG
CAACATGTATCAGAAATGGCAAGAGCAGTGGAATTACTGGGGTTACGTGCATGTCTAGTG
CAGTCAACTATGGATTCTGGCCAGGGTTTGCCACCATCTTGGGCAGATCGAACTACAGAT
GATTGTATTCAGTCTCAGAAGGAACTTTACGAGAAGCATCATGATACTGCAGATGGGCGC
ATCAGAATATGGCTTGGAATAAGGCAAATTATGAATGCAACTGATCGTTTACTACTTGAA
ACAAGAGATGTAGCTAAAGAACTAAAAACTGGAATCCACATGCATGTTGCAGAGATATCC
TATGAAAATCAAGTTGTGAAAGATACTCGAAAAGTTGATTATGGAACAGTTTCATACTTG
GAGAAGATAGATCTCCTAAATGGCAATTTGCTGGCAGCTCATACTGTTTGGGTCAATGAC
ACTGAGATTGGTTTTCTTTCAAGAGCTGGTGTTAAAGTATCTCACTGTCCTGCTTCTGCA
ATGCGGATGCTAGGATTTGCACCTATTAAGGAAATGCTTGATGCTGGAATTTGTGTCTCA
TTGGGAACAGATGGCGCACCATCAAATAACAGAATGAGCATTGTTGATGACATGTACCTT
GCTTCTCTGATTAACAAAGGACGGGAAGTTTATAAACTTGGAACAACAGATCCCACTGCT
CTCCCTGCTGAAACAATCCTCAAGATGGCAACAATCAATGGTGCAAAAACAGTACTCTGG
GAAAACGAAATAGGTTCACTTGAGATCGGGAAAAAGGCTGACATGATCATAATCAATCCT
TTCTCTTGGTCTATGGCTCCTGTTCATGACTGCATTTCCAGCCTTGTGTATAGCATGCGA
TCTGAAAATATTGTCTCAGTCATGTGCAATGGCCAGTGGATCATGAAGGATGGAAAGATC
TTGAACGTGAATGAGGGAGAAGTTATTTCAATGGCAAGGAAAGCTTCAAGTGAACTTCTG
AAGAGGGCGGGCATTAGAATTCCTAAGAGAATGAATATGATTTGATAGTTGTTTCTTCCT
AAAAGCCCACTCCTTGTATCATACTTTGTGTTTTGTTGGAATGTTTCTTCAAGCGTACTC
CTTCTTGTATCATACTTTCCGTGTGTTTTGTTGGAATGTTT