Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0137g00560.t01
CDS Infomation

cds chromosome:12X:1:7047847:7050240:-1 gene:VIT_01s0137g00560 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGCTCTATTCCCCATCAATGTGGCTTCATCTGCTTCTGCTACTTCTCCCTCTAATG
TTTCTCATAAAACGGAAAATAGAGTTGACGGGGCAAAAGAAGCCGCTGCCTCCTGGCCCT
ACTAAGCTTCCCATTATAGGTAATTTGCACCAACTTGGTGCGTTGCCTCACTACTCTTTA
TGGCAACTATCTAAGAAATATGGCTCCATCATGCTCCTTCAGCTCGGTGTCCCTACCGTC
GTAGTCTCCTCTGCGGAAGCTGCAAGGGAATTCTTGAAAACTCATGATATTGATTGTTGC
AGTCGACCTCCCTTAGTTGGACTTGGAAAATTCTCATACAATCACCGAGACATATCTTTT
GCGCCATACGGCGACTACTGGAGGGAGGTACGCAAGATCTGTGTTCTCGAGGTGTTTAGC
ACAAAAAGGGTGCAGTCGTTTCAGTTCATCAGAGAAGAGGAGGTCGCTTTGCTGATTGAT
TCAATTGTGCAATCGTCTTCTTCTGGAAGTCCTATTGATCTTACCGAGAGGCTAATGTCT
CTCACAGCAAATATAATTTGTAGGATTGCATTCGGAAAGAGTTTTCAAGCGAGTGAGTTT
GGTGACGGAAGATTTCAAGAAGTGGTTCATGAAGCCATGGCTTTGTTGGGCGGGCTCACT
GCAGCCGATTTCTTTCCGTACGTGGGTCGGATTGTGGATAGACTCACTGGTCTTCATGGA
AGGCTTGAGAGGAGTTTCCATGAAATGGACGGCTTCTACCAACAGGTGATCGAAGACCAT
CTCAACCCAGGAAGGGTGAAAGAGGAGCATGAAGACATCATCGACGTGCTGCTGAGAATA
GAGAGGGAACAATCTGAATCCAGTGCCCTACAGTTTACTAAAGATAACGCGAAAGCAATC
GTTATGGATTTATTCTTGGCTGGAGTGGACACTGGTGCAATCACCGTATCTTGGGCAATG
ACCGAGCTTGCTAGGAACCCAAGAATAATGAAAAAAGCCCAGGCTGAAGTTAGAAACTCC
ATTGGAAATAAAGGAAAAGTCACGGAGGGTGATGTCGATCAGCTTCACTACCTCAAGATG
GTGGTCAAAGAAACTTTGAGACTGCATCCTCCCGCCCCACTTCTACTTCCAAGAGAAACC
ATGTCACATTTTGAGATAAACGGATACCACTTTTACCCGAAAACCCAAGTCCACGTAAAC
GTTTGGGCAATTGGGCGAGACCCCAACCTCTGGAAGAACCCAGAGGAGTTTTTGCCCGAG
AGGTTTATGGACAACTCTGTAGATTTTAGAGGACAACATTTTGAGCTACTGCCTTTCGGA
GCGGGAAGAAGAATTTGCCCGGGTATGTATATGGCGATTGCAACAGTGGAGCTCGCACTT
GCTAATCTTTTATATCGTTTCAATTGGAACTTGCCGAATGGGATGAAGGAGACAGATATT
AGCATGGAAGAAGCAGCAGGCCTTACTGTCCGTAAGAAGTTTGCTCTTAACCTTGTGCCA
ATTCTCCATCACTGTTAA

Peptide Sequence

PEP ID

VIT_01s0137g00560.t01
PEP Infomation

pep chromosome:12X:1:7047847:7050240:-1 gene:VIT_01s0137g00560 transcript:VIT_01s0137g00560.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MELYSPSMWLHLLLLLLPLMFLIKRKIELTGQKKPLPPGPTKLPIIGNLHQLGALPHYSL
WQLSKKYGSIMLLQLGVPTVVVSSAEAAREFLKTHDIDCCSRPPLVGLGKFSYNHRDISF
APYGDYWREVRKICVLEVFSTKRVQSFQFIREEEVALLIDSIVQSSSSGSPIDLTERLMS
LTANIICRIAFGKSFQASEFGDGRFQEVVHEAMALLGGLTAADFFPYVGRIVDRLTGLHG
RLERSFHEMDGFYQQVIEDHLNPGRVKEEHEDIIDVLLRIEREQSESSALQFTKDNAKAI
VMDLFLAGVDTGAITVSWAMTELARNPRIMKKAQAEVRNSIGNKGKVTEGDVDQLHYLKM
VVKETLRLHPPAPLLLPRETMSHFEINGYHFYPKTQVHVNVWAIGRDPNLWKNPEEFLPE
RFMDNSVDFRGQHFELLPFGAGRRICPGMYMAIATVELALANLLYRFNWNLPNGMKETDI
SMEEAAGLTVRKKFALNLVPILHHC

Transcript Sequence

Transcript ID

VIT_01s0137g00560.t01
Transcript Infomation

cdna chromosome:12X:1:7047847:7050240:-1 gene:VIT_01s0137g00560 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CGATGATATATGTGTATCCTAAGTACATCCCACCCAAGATTCATAGAGCGAGCAAGCTCC
AATGGAGCTCTATTCCCCATCAATGTGGCTTCATCTGCTTCTGCTACTTCTCCCTCTAAT
GTTTCTCATAAAACGGAAAATAGAGTTGACGGGGCAAAAGAAGCCGCTGCCTCCTGGCCC
TACTAAGCTTCCCATTATAGGTAATTTGCACCAACTTGGTGCGTTGCCTCACTACTCTTT
ATGGCAACTATCTAAGAAATATGGCTCCATCATGCTCCTTCAGCTCGGTGTCCCTACCGT
CGTAGTCTCCTCTGCGGAAGCTGCAAGGGAATTCTTGAAAACTCATGATATTGATTGTTG
CAGTCGACCTCCCTTAGTTGGACTTGGAAAATTCTCATACAATCACCGAGACATATCTTT
TGCGCCATACGGCGACTACTGGAGGGAGGTACGCAAGATCTGTGTTCTCGAGGTGTTTAG
CACAAAAAGGGTGCAGTCGTTTCAGTTCATCAGAGAAGAGGAGGTCGCTTTGCTGATTGA
TTCAATTGTGCAATCGTCTTCTTCTGGAAGTCCTATTGATCTTACCGAGAGGCTAATGTC
TCTCACAGCAAATATAATTTGTAGGATTGCATTCGGAAAGAGTTTTCAAGCGAGTGAGTT
TGGTGACGGAAGATTTCAAGAAGTGGTTCATGAAGCCATGGCTTTGTTGGGCGGGCTCAC
TGCAGCCGATTTCTTTCCGTACGTGGGTCGGATTGTGGATAGACTCACTGGTCTTCATGG
AAGGCTTGAGAGGAGTTTCCATGAAATGGACGGCTTCTACCAACAGGTGATCGAAGACCA
TCTCAACCCAGGAAGGGTGAAAGAGGAGCATGAAGACATCATCGACGTGCTGCTGAGAAT
AGAGAGGGAACAATCTGAATCCAGTGCCCTACAGTTTACTAAAGATAACGCGAAAGCAAT
CGTTATGGATTTATTCTTGGCTGGAGTGGACACTGGTGCAATCACCGTATCTTGGGCAAT
GACCGAGCTTGCTAGGAACCCAAGAATAATGAAAAAAGCCCAGGCTGAAGTTAGAAACTC
CATTGGAAATAAAGGAAAAGTCACGGAGGGTGATGTCGATCAGCTTCACTACCTCAAGAT
GGTGGTCAAAGAAACTTTGAGACTGCATCCTCCCGCCCCACTTCTACTTCCAAGAGAAAC
CATGTCACATTTTGAGATAAACGGATACCACTTTTACCCGAAAACCCAAGTCCACGTAAA
CGTTTGGGCAATTGGGCGAGACCCCAACCTCTGGAAGAACCCAGAGGAGTTTTTGCCCGA
GAGGTTTATGGACAACTCTGTAGATTTTAGAGGACAACATTTTGAGCTACTGCCTTTCGG
AGCGGGAAGAAGAATTTGCCCGGGTATGTATATGGCGATTGCAACAGTGGAGCTCGCACT
TGCTAATCTTTTATATCGTTTCAATTGGAACTTGCCGAATGGGATGAAGGAGACAGATAT
TAGCATGGAAGAAGCAGCAGGCCTTACTGTCCGTAAGAAGTTTGCTCTTAACCTTGTGCC
AATTCTCCATCACTGTTAACAAGAAAAGAAAAGTAGAAAAATAAAAAGAAGTTTAAATTT
ATTTATTTTT