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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0137g00420.t01
CDS Infomation

cds chromosome:12X:1:6948102:6954755:1 gene:VIT_01s0137g00420 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:D7SME1]
Sequence

ATGTCTAAGGCAGTTGTAGATGTTCCTCCCAAGGGTGGGTTTAGCTTTGACCTATGTAGA
AGGAATGAAATGTTGTCGAAAAAAGGTGTTCAGACTCCACCTTTTCGGAAGACAGGAACC
ACTATTGTTGGGCTAGTTTTCCAGGATGGTGTCATTCTTGGAGCAGATACAAGGGCCACT
GAAGGACCCATAGTTTGTGATAAGAATTGTGAAAAAATTCATTATATGGCACCTAACATT
TATTGCTGTGGAGCAGGAACTGCAGCTGATACAGAGGCAGTAACAGACATGGTTAGTTCC
CAGCTGCAGTTACATCGTTATCATACTGGTCGAGAATCAAGGGTTGTGACAGCTCTTACC
CTTCTGAAGTCTCATCTTTTTAGTTATCAAGGCTATGTTCAAGCTGCTTTGGTGCTTGGT
GGAGTTGATTGCACTGGACCACATTTGCACACTATCTACCCCCATGGATCTACAGACACA
CTGCCCTTTGCCACAATGGGCTCTGGTTCTCTTGCTGCAATGGCCGTATTTGAGTCAAAG
TATCATGAAGGGTTGACTAGGGAAGAGGGAATAAATTTAGTAAGCGAGGCTATTTGCTCT
GGCATATTCAATGACTTGGGGAGTGGAAGCAATGTAGATGTTTGTGTAATAACCAAGGGC
CATAAGGAGTACCTTAGAAACCACCAGCTGCCGAATCCTCGCACCTACGTGAGTGCAAAA
GGATATTCATTTCCCAAGCCAATTGAGGTTCTCTTGACCAAGGTTACTCCACTGAAAGAA
AAAGTTGAAGTGATTGAAGGGGGAGATGCAATGGAAGAGTGA

Peptide Sequence

PEP ID

VIT_01s0137g00420.t01
PEP Infomation

pep chromosome:12X:1:6948102:6954755:1 gene:VIT_01s0137g00420 transcript:VIT_01s0137g00420.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:D7SME1]
Sequence

MSKAVVDVPPKGGFSFDLCRRNEMLSKKGVQTPPFRKTGTTIVGLVFQDGVILGADTRAT
EGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALT
LLKSHLFSYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAVFESK
YHEGLTREEGINLVSEAICSGIFNDLGSGSNVDVCVITKGHKEYLRNHQLPNPRTYVSAK
GYSFPKPIEVLLTKVTPLKEKVEVIEGGDAMEE

Transcript Sequence

Transcript ID

VIT_01s0137g00420.t01
Transcript Infomation

cdna chromosome:12X:1:6948102:6954755:1 gene:VIT_01s0137g00420 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:D7SME1]
Sequence

ATCCCTTGCTTTTCTTATTCCCCAAGCTTTCGTTGCCAATACGCAGCGAAGTCTTCACTG
GTTCCTCAGACTCAGATCTTCGTCGATTTTTCAGGTTTGCGTGATGTCTAAGGCAGTTGT
AGATGTTCCTCCCAAGGGTGGGTTTAGCTTTGACCTATGTAGAAGGAATGAAATGTTGTC
GAAAAAAGGTGTTCAGACTCCACCTTTTCGGAAGACAGGAACCACTATTGTTGGGCTAGT
TTTCCAGGATGGTGTCATTCTTGGAGCAGATACAAGGGCCACTGAAGGACCCATAGTTTG
TGATAAGAATTGTGAAAAAATTCATTATATGGCACCTAACATTTATTGCTGTGGAGCAGG
AACTGCAGCTGATACAGAGGCAGTAACAGACATGGTTAGTTCCCAGCTGCAGTTACATCG
TTATCATACTGGTCGAGAATCAAGGGTTGTGACAGCTCTTACCCTTCTGAAGTCTCATCT
TTTTAGTTATCAAGGCTATGTTCAAGCTGCTTTGGTGCTTGGTGGAGTTGATTGCACTGG
ACCACATTTGCACACTATCTACCCCCATGGATCTACAGACACACTGCCCTTTGCCACAAT
GGGCTCTGGTTCTCTTGCTGCAATGGCCGTATTTGAGTCAAAGTATCATGAAGGGTTGAC
TAGGGAAGAGGGAATAAATTTAGTAAGCGAGGCTATTTGCTCTGGCATATTCAATGACTT
GGGGAGTGGAAGCAATGTAGATGTTTGTGTAATAACCAAGGGCCATAAGGAGTACCTTAG
AAACCACCAGCTGCCGAATCCTCGCACCTACGTGAGTGCAAAAGGATATTCATTTCCCAA
GCCAATTGAGGTTCTCTTGACCAAGGTTACTCCACTGAAAGAAAAAGTTGAAGTGATTGA
AGGGGGAGATGCAATGGAAGAGTGAATTTTGTGATTGAACTGAGTTGTATGGTTTCTATC
AATTTCTTTATGCTTCCATCTCTTCAAGCTTTTCATTATGTATGCTAAATCTAGTTGGAG
ATTTGGATGAATTGTCATCAAATTTCAACTGTCAGTTTTCAGTTTTTCATATATTATATT
TTGCTAACCTGGGCTATTTGAGATTCA