Gene sequences

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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_01s0137g00240.t01
CDS Infomation	cds chromosome:12X:1:6744527:6746460:1 gene:VIT_01s0137g00240 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:D7SMF7]
Sequence	ATGGCAATTCCTCTCTCTGTTCTTCTCTTCCTCCTGCCTCTTCTGTCTCCAACCTTCATT TCCTCTTCGCCGGTTCAAGATCCTGAGCTAGTAGTAGAAGAAGTGCACAAGAGGATCAAT GCTTCAAGGAGGAACTTGGGGTTCCTGTCTTGCGGAACCGGCAACCCCATCGACGACTGC TGGCGGTGCGACCCAGATTGGGAAAAGAACCGCCAGGGTTTGGCTGACTGCTCAATCGGG TTTGGGAGGCATGCCATAGGCGGAAGAGATGGGGAGATTTACGTGGTGACAGACTCAGGG GACTATGACCCTGTGAACCCTAAGCCTGGCACTCTGAGATATGCAGTGATCCAAAAGGAG CCATTGTGGATCATTTTCCAGAGGGATATGGTGATCAAACTGAAGGAAGAGCTGATCATG AACTCGTTCAAGACCATCGACGGAAGAGGCGCCAGCGTCCACATTGCGGGAGGGCCGTGC ATTACTATCCAGTACGTGACCAACATTATCATTCATGGCCTCAACATACACGACTGCAAG CAAGGAGGAAACGCCAATGTGAGGGACTCCCCCGACCATTACGGGTGGAGGACGATATCA GACGGGGATGGGGTGTCCATATTCGGGGGAAGCCATGTTTGGGTGGACCACTGCTCTCTC TCCAACTGCAATGACGGACTGGTGGATGCCATCCATGGATCCACGGCCATCACCATCTCC AACAACTACATGACCCATCATAACAAGGTCATGCTATTGGGCCACAGTGATTCCTATACT CAAGACAAGAACATGCAGGTTACCATTGCCTTCAACCATTTTGGAGAAGGTCTCGTCCAG AGAATGCCCAGATGTCGACACGGCTATTTTCATGTGGTGAATAACGACTACTCGCACTGG GAAATGTACGCTATTGGGGGAAGCGCGGAGCCTACAATTAACAGCCAAGGCAATAGATTT CTTGCTCCTGATGACAGATTCAGCAAGGAGGTAACCAAACATGAGGATGCACCACAGAGC CAATGGAAGAATTGGAATTGGAGATCAGAAGGAGATTTATTGTTAAATGGTGCCTTCTTC ACAGCATCAGGGGCCGGAGCTTCTTCTAGTTACGCCAAGGCTTCGAGTTTGGGGGCAAGA CCCTCATCTCTTATCACCACTATCACAAATGGGGCTGGTGCACTCAACTGCAAGAAAGGC AAGCGTTGCTGA

Peptide Sequence

PEP ID	VIT_01s0137g00240.t01
PEP Infomation	pep chromosome:12X:1:6744527:6746460:1 gene:VIT_01s0137g00240 transcript:VIT_01s0137g00240.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:D7SMF7]
Sequence	MAIPLSVLLFLLPLLSPTFISSSPVQDPELVVEEVHKRINASRRNLGFLSCGTGNPIDDC WRCDPDWEKNRQGLADCSIGFGRHAIGGRDGEIYVVTDSGDYDPVNPKPGTLRYAVIQKE PLWIIFQRDMVIKLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCK QGGNANVRDSPDHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLVDAIHGSTAITIS NNYMTHHNKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYSHW EMYAIGGSAEPTINSQGNRFLAPDDRFSKEVTKHEDAPQSQWKNWNWRSEGDLLLNGAFF TASGAGASSSYAKASSLGARPSSLITTITNGAGALNCKKGKRC

Transcript Sequence

Transcript ID	VIT_01s0137g00240.t01
Transcript Infomation	cdna chromosome:12X:1:6744527:6746460:1 gene:VIT_01s0137g00240 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:D7SMF7]
Sequence	TTCTTCTCTTCTCTGTTTTTCTTATTTTCAAGACGGGAGAAAGCTATGGCAATTCCTCTC TCTGTTCTTCTCTTCCTCCTGCCTCTTCTGTCTCCAACCTTCATTTCCTCTTCGCCGGTT CAAGATCCTGAGCTAGTAGTAGAAGAAGTGCACAAGAGGATCAATGCTTCAAGGAGGAAC TTGGGGTTCCTGTCTTGCGGAACCGGCAACCCCATCGACGACTGCTGGCGGTGCGACCCA GATTGGGAAAAGAACCGCCAGGGTTTGGCTGACTGCTCAATCGGGTTTGGGAGGCATGCC ATAGGCGGAAGAGATGGGGAGATTTACGTGGTGACAGACTCAGGGGACTATGACCCTGTG AACCCTAAGCCTGGCACTCTGAGATATGCAGTGATCCAAAAGGAGCCATTGTGGATCATT TTCCAGAGGGATATGGTGATCAAACTGAAGGAAGAGCTGATCATGAACTCGTTCAAGACC ATCGACGGAAGAGGCGCCAGCGTCCACATTGCGGGAGGGCCGTGCATTACTATCCAGTAC GTGACCAACATTATCATTCATGGCCTCAACATACACGACTGCAAGCAAGGAGGAAACGCC AATGTGAGGGACTCCCCCGACCATTACGGGTGGAGGACGATATCAGACGGGGATGGGGTG TCCATATTCGGGGGAAGCCATGTTTGGGTGGACCACTGCTCTCTCTCCAACTGCAATGAC GGACTGGTGGATGCCATCCATGGATCCACGGCCATCACCATCTCCAACAACTACATGACC CATCATAACAAGGTCATGCTATTGGGCCACAGTGATTCCTATACTCAAGACAAGAACATG CAGGTTACCATTGCCTTCAACCATTTTGGAGAAGGTCTCGTCCAGAGAATGCCCAGATGT CGACACGGCTATTTTCATGTGGTGAATAACGACTACTCGCACTGGGAAATGTACGCTATT GGGGGAAGCGCGGAGCCTACAATTAACAGCCAAGGCAATAGATTTCTTGCTCCTGATGAC AGATTCAGCAAGGAGGTAACCAAACATGAGGATGCACCACAGAGCCAATGGAAGAATTGG AATTGGAGATCAGAAGGAGATTTATTGTTAAATGGTGCCTTCTTCACAGCATCAGGGGCC GGAGCTTCTTCTAGTTACGCCAAGGCTTCGAGTTTGGGGGCAAGACCCTCATCTCTTATC ACCACTATCACAAATGGGGCTGGTGCACTCAACTGCAAGAAAGGCAAGCGTTGCTGATTG GAGCACCCCGCAGCACTAGTATGAAGGTGAAGACAAGTGCAGTGAAAAATGTTAATAAGG GAGGAAGAAGCTGGAAAGGCCAGCTTGTATTTACAAGTTTGTTGTTTGTTACTCTTTATG ATTACAACCACCGCCTTGTTTCAAACCAAAAGAAAAGAAAACCATCACTTTGGGTTCCCT GTTGGGAATAGAATGGGGTAAAGAAGAAACGAAGAGCAGTGACTGTTGATAGATAGAATT TCCAATATATCTGTCCTTACAACATTAAAAGCTCATTGAATTTTCAATGGCTTCAT