Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0127g00590.t01
CDS Infomation

cds chromosome:12X:1:7943139:7945596:-1 gene:VIT_01s0127g00590 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTACTGATAAAATCGATGGCGTTTCTCACGATTTGGTTTTGCTCCTCACTAGTGAG
GATCGGGACTTCCTTGTCCGTAATAATGGCCACCAGGTTAAAGTAGAGAGTTTGAAGGGG
AAGAAAATTTGGCTATATTTTTCAGCATCATGGTGTGGGCCATGTCGGCAATTCACCCCT
AAATTAGTAGAGGTGTACGATGAATTCTCCTCCAAAGGCGATTTTGAAATCATCTTTGTT
TCACTTGACAAAGGCGATCAGTTGTTCAATGAATATTTCTCCAAGATGCCCTGGCTTGCA
ATCCCATTTTCTGATTCGGACACGCGTGATCACTTGAAGAAATTGTTCAAGATGAGGGGG
ATTCCAAGCCTTGCGATGCTTGATGAATCTGGCAAGGTTTTGAGCAGTGAGGGAGTTGAG
ATCATAAAAGATTATGGAGTGGAAGGGTATCCTTTCACAGCTGAAAAGATCAAAGAACTG
AAGGAAAAGGAAGAAACAGCCAAGAAGGAACAATCCTTGAGATCCATCTTGGTTTCACAA
TCCCGTGACTATGTTATTTCAGCTGATGGAAGGAAGGTATCCGTGTCTGAATTAGAAGGG
AAGTTAGTGGGACTGTATTTCTCATTGTCCTCCTACAACGCATGCCAGGAATTTACTACA
ACACTGGCGGAAGTTTATGAGGAACTAAGGGCAAAGGGGGAGAGCTTTGAAATAGTCATG
ATATCGCTTGATGATGAGGAACAATCATTCAAAAAATACTTTGAAAGCATGCCTTGGTTT
GCGTTGCCTTTCAATGACAAGAGCTGCGGGAAACTGGCTCGCTACTTTAAGCTCAGAGTC
CTACCCACTTTGGTTGTTATTGGGCAAGATGGAAAGACTCTCCATTCCAATGTTGCCGAA
GCTATTGAGCAACATGGGATTCAGGCATACCCTTTTACACCAGAGAAGTTTGTGGAGCTC
GAGGAGATTGAGAAGGCAAAACGAGAAGCGCAGACGCTTGAGTCAATTTTGGTTTCAGGG
GACACAGATTTTGTGATTGGGAAAGATGGAGTCAAGATTCCAGTGTCTCACCTAGCAGGG
AAGAACATCCTCCTATATTTCTCAGCACATTGGTGCCCCCCATGCCGCGCTTTCCTACCA
AAACTTATAGAAGCATACCAGAATATTAAGGCAAAGGATGAAGCATTCGAAGTGATTTTC
ATCTCTAGTGACAGGGATCAGGCCTCCTTTGATGAATTCTTTTCAGGTATGCCATGGCTG
GCACTTCCCTTTGGGGACAAAAGGAAAGCTTCCTTGGGTCGCACCTTCAAGGTCAGGAGC
ATCCCCAAGCTCATAGCCGTTGAACCAACGGGCCGGACAGTGACAACAGAAGCCAGAAAT
CTTGTTATGATTCATGGGGCTGATGCTTATCCCTTCACTGATGAACATATAAAGGAGATC
GAAGCGCGGTATGAGGAGATGGCAAAGGGGTGGCCAGCGAAGGTGAAGCACGCCCTTCAC
GAACAGCATGAGCTTGTGCTCACTAAGCATCGCATGTATAGATGTAATGGGTGTGAGAAG
GAGGGACATTTGTGGTCATTCTATTGTGCAGAATGTGATTTCGACCTCCATCCCAAGTGC
GCACTAGACGAAGACAAAGGAATCAAAGATGATAATAAATTGGAGAAAGCAAAACCTGGT
GAAGGATGGAAATGTGATGGGGAAGTATGCTCCAGAGCTTGA

Peptide Sequence

PEP ID

VIT_01s0127g00590.t01
PEP Infomation

pep chromosome:12X:1:7943139:7945596:-1 gene:VIT_01s0127g00590 transcript:VIT_01s0127g00590.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MATDKIDGVSHDLVLLLTSEDRDFLVRNNGHQVKVESLKGKKIWLYFSASWCGPCRQFTP
KLVEVYDEFSSKGDFEIIFVSLDKGDQLFNEYFSKMPWLAIPFSDSDTRDHLKKLFKMRG
IPSLAMLDESGKVLSSEGVEIIKDYGVEGYPFTAEKIKELKEKEETAKKEQSLRSILVSQ
SRDYVISADGRKVSVSELEGKLVGLYFSLSSYNACQEFTTTLAEVYEELRAKGESFEIVM
ISLDDEEQSFKKYFESMPWFALPFNDKSCGKLARYFKLRVLPTLVVIGQDGKTLHSNVAE
AIEQHGIQAYPFTPEKFVELEEIEKAKREAQTLESILVSGDTDFVIGKDGVKIPVSHLAG
KNILLYFSAHWCPPCRAFLPKLIEAYQNIKAKDEAFEVIFISSDRDQASFDEFFSGMPWL
ALPFGDKRKASLGRTFKVRSIPKLIAVEPTGRTVTTEARNLVMIHGADAYPFTDEHIKEI
EARYEEMAKGWPAKVKHALHEQHELVLTKHRMYRCNGCEKEGHLWSFYCAECDFDLHPKC
ALDEDKGIKDDNKLEKAKPGEGWKCDGEVCSRA

Transcript Sequence

Transcript ID

VIT_01s0127g00590.t01
Transcript Infomation

cdna chromosome:12X:1:7943139:7945596:-1 gene:VIT_01s0127g00590 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGTGAGAATCGAAGACATGGCTACTGATAAAATCGATGGCGTTTCTCACGATTTGGTTTT
GCTCCTCACTAGTGAGGATCGGGACTTCCTTGTCCGTAATAATGGCCACCAGGTTAAAGT
AGAGAGTTTGAAGGGGAAGAAAATTTGGCTATATTTTTCAGCATCATGGTGTGGGCCATG
TCGGCAATTCACCCCTAAATTAGTAGAGGTGTACGATGAATTCTCCTCCAAAGGCGATTT
TGAAATCATCTTTGTTTCACTTGACAAAGGCGATCAGTTGTTCAATGAATATTTCTCCAA
GATGCCCTGGCTTGCAATCCCATTTTCTGATTCGGACACGCGTGATCACTTGAAGAAATT
GTTCAAGATGAGGGGGATTCCAAGCCTTGCGATGCTTGATGAATCTGGCAAGGTTTTGAG
CAGTGAGGGAGTTGAGATCATAAAAGATTATGGAGTGGAAGGGTATCCTTTCACAGCTGA
AAAGATCAAAGAACTGAAGGAAAAGGAAGAAACAGCCAAGAAGGAACAATCCTTGAGATC
CATCTTGGTTTCACAATCCCGTGACTATGTTATTTCAGCTGATGGAAGGAAGGTATCCGT
GTCTGAATTAGAAGGGAAGTTAGTGGGACTGTATTTCTCATTGTCCTCCTACAACGCATG
CCAGGAATTTACTACAACACTGGCGGAAGTTTATGAGGAACTAAGGGCAAAGGGGGAGAG
CTTTGAAATAGTCATGATATCGCTTGATGATGAGGAACAATCATTCAAAAAATACTTTGA
AAGCATGCCTTGGTTTGCGTTGCCTTTCAATGACAAGAGCTGCGGGAAACTGGCTCGCTA
CTTTAAGCTCAGAGTCCTACCCACTTTGGTTGTTATTGGGCAAGATGGAAAGACTCTCCA
TTCCAATGTTGCCGAAGCTATTGAGCAACATGGGATTCAGGCATACCCTTTTACACCAGA
GAAGTTTGTGGAGCTCGAGGAGATTGAGAAGGCAAAACGAGAAGCGCAGACGCTTGAGTC
AATTTTGGTTTCAGGGGACACAGATTTTGTGATTGGGAAAGATGGAGTCAAGATTCCAGT
GTCTCACCTAGCAGGGAAGAACATCCTCCTATATTTCTCAGCACATTGGTGCCCCCCATG
CCGCGCTTTCCTACCAAAACTTATAGAAGCATACCAGAATATTAAGGCAAAGGATGAAGC
ATTCGAAGTGATTTTCATCTCTAGTGACAGGGATCAGGCCTCCTTTGATGAATTCTTTTC
AGGTATGCCATGGCTGGCACTTCCCTTTGGGGACAAAAGGAAAGCTTCCTTGGGTCGCAC
CTTCAAGGTCAGGAGCATCCCCAAGCTCATAGCCGTTGAACCAACGGGCCGGACAGTGAC
AACAGAAGCCAGAAATCTTGTTATGATTCATGGGGCTGATGCTTATCCCTTCACTGATGA
ACATATAAAGGAGATCGAAGCGCGGTATGAGGAGATGGCAAAGGGGTGGCCAGCGAAGGT
GAAGCACGCCCTTCACGAACAGCATGAGCTTGTGCTCACTAAGCATCGCATGTATAGATG
TAATGGGTGTGAGAAGGAGGGACATTTGTGGTCATTCTATTGTGCAGAATGTGATTTCGA
CCTCCATCCCAAGTGCGCACTAGACGAAGACAAAGGAATCAAAGATGATAATAAATTGGA
GAAAGCAAAACCTGGTGAAGGATGGAAATGTGATGGGGAAGTATGCTCCAGAGCTTGAGA
AGTTTGAGCTGTCTTCAGTAAAAGCTCCTTTTGATTTTAAATATTTGTTTCCATGGCTAT
GGTTTTTAGTTATATGTGTGCTTGTAACAGCTAGCATAACGAGCTTTGGATGACACTGTT
GACAAAGCCTAGAGGAGCATGTATTTTGTCACAAGGTTACCATGGATTTTAGGTCCTTAT
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