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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0127g00150.t01
CDS Infomation

cds chromosome:12X:1:7494053:7502229:-1 gene:VIT_01s0127g00150 gene_biotype:protein_coding transcript_biotype:protein_coding description:2-phytyl-1,4-beta-naphthoquinone methyltransferase, chloroplastic [Source:UniProtKB/TrEMBL;Acc:D7TDK4]
Sequence

ATGGCTTCACTTCACTTCCTTCTTCGCCCATCCTCCAATCCCAATCTTCTCGCTTTACCC
TCCAGATCTCGACCGGTTCAATGTGCTAACGAGCGCCAGGCGCTGTTTAGCCGCATTGCT
CCTGTTTACGATAATCTGAATGATTTCTTGAGTTTGGGGCAGCACCGGATATGGAAAAGA
ATGGCGGTATCATGGAGCGGGGCCAAGAGGGGAGACGATGTGTTGGATTTGTGTTGTGGA
AGTGGGGATTTGGCATTTCTACTATCAGAAAGAGTTGGGTCTGATGGCAAGGTGATAGGT
TTTGATTTCTCAAGGGAGCAATTATCGGTTGCTTCATCTCGACAACACTTGCTCTCAAAA
GCCTGCTACAAGAACATTGAGTGGATTGAGGGCGATGCAACTAAGTTGCCTTTTTCTGAT
TGTTCTTTTGATGCCATTACCATGGGTTATGGGCTACGAAATGTGTTAGATAGAGGCAAG
GCCATGCAAGAGATGTTTCGAGTCTTGAAACCAGGGTCAAGGGTATCCATCCTCGATTTC
AATAAAAGCACTAAACCATTTATTACATCAATTCAGGAATGGATGATTGATAATGTAGTT
GTTCCTGTTGCAACTGGTTATGGCCTTGCTGATGAGTATGCATATTTGAAAAGCTCAGTT
CAGGAATTCTTAACAGGGAAGGAGTTGGAGAAGCTTGCTTTAGAAATGGGATTTTCCAAT
GCCAAACATTATGAGATTGGTGGAGGCATCATGGGGAACTTAGTAGCCAAACGGTAG

Peptide Sequence

PEP ID

VIT_01s0127g00150.t01
PEP Infomation

pep chromosome:12X:1:7494053:7502229:-1 gene:VIT_01s0127g00150 transcript:VIT_01s0127g00150.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:2-phytyl-1,4-beta-naphthoquinone methyltransferase, chloroplastic [Source:UniProtKB/TrEMBL;Acc:D7TDK4]
Sequence

MASLHFLLRPSSNPNLLALPSRSRPVQCANERQALFSRIAPVYDNLNDFLSLGQHRIWKR
MAVSWSGAKRGDDVLDLCCGSGDLAFLLSERVGSDGKVIGFDFSREQLSVASSRQHLLSK
ACYKNIEWIEGDATKLPFSDCSFDAITMGYGLRNVLDRGKAMQEMFRVLKPGSRVSILDF
NKSTKPFITSIQEWMIDNVVVPVATGYGLADEYAYLKSSVQEFLTGKELEKLALEMGFSN
AKHYEIGGGIMGNLVAKR

Transcript Sequence

Transcript ID

VIT_01s0127g00150.t01
Transcript Infomation

cdna chromosome:12X:1:7494053:7502229:-1 gene:VIT_01s0127g00150 gene_biotype:protein_coding transcript_biotype:protein_coding description:2-phytyl-1,4-beta-naphthoquinone methyltransferase, chloroplastic [Source:UniProtKB/TrEMBL;Acc:D7TDK4]
Sequence

CAGTTTTCTGTTTTCATTTCATCGGGCGGAGAGGAGATAAACTCACCTCCTATGGCTTCA
CTTCACTTCCTTCTTCGCCCATCCTCCAATCCCAATCTTCTCGCTTTACCCTCCAGATCT
CGACCGGTTCAATGTGCTAACGAGCGCCAGGCGCTGTTTAGCCGCATTGCTCCTGTTTAC
GATAATCTGAATGATTTCTTGAGTTTGGGGCAGCACCGGATATGGAAAAGAATGGCGGTA
TCATGGAGCGGGGCCAAGAGGGGAGACGATGTGTTGGATTTGTGTTGTGGAAGTGGGGAT
TTGGCATTTCTACTATCAGAAAGAGTTGGGTCTGATGGCAAGGTGATAGGTTTTGATTTC
TCAAGGGAGCAATTATCGGTTGCTTCATCTCGACAACACTTGCTCTCAAAAGCCTGCTAC
AAGAACATTGAGTGGATTGAGGGCGATGCAACTAAGTTGCCTTTTTCTGATTGTTCTTTT
GATGCCATTACCATGGGTTATGGGCTACGAAATGTGTTAGATAGAGGCAAGGCCATGCAA
GAGATGTTTCGAGTCTTGAAACCAGGGTCAAGGGTATCCATCCTCGATTTCAATAAAAGC
ACTAAACCATTTATTACATCAATTCAGGAATGGATGATTGATAATGTAGTTGTTCCTGTT
GCAACTGGTTATGGCCTTGCTGATGAGTATGCATATTTGAAAAGCTCAGTTCAGGAATTC
TTAACAGGGAAGGAGTTGGAGAAGCTTGCTTTAGAAATGGGATTTTCCAATGCCAAACAT
TATGAGATTGGTGGAGGCATCATGGGGAACTTAGTAGCCAAACGGTAGGTAGGATTTGCT
TCTCTTGCAAATTTTTCTAATTTTATTTTGTAAGGATTAGCATTCTGTGTTGAAGGATAT
ATTTAATGTGAGTTCTGAATTGTACCTTGAGCTCACTGTTCAGGTTAAAGGATTTTTCAT
TGAAGTGTTCATCTAA