Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0127g00140.t01
CDS Infomation

cds chromosome:12X:1:7490194:7493341:1 gene:VIT_01s0127g00140 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGATGAAGCAAGCCAACCCATCAGCCCCTTCCCCTTCTCTTCTCTTCTTTTTTATC
CTAACTCTATCGGTGATAGAACTATCCGCCGGAGACCCCAGATCACGAACGATCCAAATG
ATGTGCGGGAACCAGCGTGAGCACAATTCAACCATCTTCGTCATCAACTTTGTGGCTATG
ATGGAAAATATCAGTAATCAAATGCGCACTTCTGGTTTTGGCGTGGCTGTTCTTGGCTCT
GCACCTGATGCTACCTATGGTCTTGCCCAATGCTATGGAGATCTGTCTTTGCTTGATTGT
GTATTATGCTACGCTGAGGCGCGAACATTTCTTCCCCAGTGCTTTCCTTTCACTACGGGT
CGCATTTACCTTGATGGTTGCTTTATGCGAGCTCAAAATTACAGCTTCATTGAGGAGTAT
ACAGGACCAAGTGACCATGCTTTGTGTGGAAACGAAACCCGAAAGAACTCCACGTTCCAG
GAGTCTGCAAGGCAGGCTATAAAGCAAGCAGTTGCTGATGCACCAAACAATAATGGGTAT
GCAAGGAGTAAGGTGATGGTGCCGGGAACAGCAAATGAGTCGGCCTATGTGCTGGCTAAT
TGCTGGAGGACTTTGAATGCAATATCATGTAGGGCGTGTCTGGAGAATGCATCGTCATCG
ATATTGGGATGCTTGCCTTGGTCTGAAGGGCGGGCACTGAACACAGGGTGCTTCATGAGA
TACTCAGATACAGATTTCCTCAACAAAGAACCAGATAATGGAAGTTCAAGGGGGACCATA
ATAATAATAGTAGTATCTGCTGTAAGTGCTGTGATTGTTCTTCTAGTAGGGGGAGCGATT
GGAGTTTATATCTTGAAGCAAAGAAAGATCCAAAAGAAAAGGAGAGGTTCCAACGATGCT
ATAAAATTAGTTAAGACCCTCCATGACAGTAGCTTGAACTTCAAATATGCTACACTTGAG
AAGGCCACAGGATCTTTTGACAATGCCAACAAGCTTGGACAAGGAGGATTTGGAACTGTT
TATAAGGGAGTTCTGGCTGATGGAAGAGAGATTGCTGTGAAGAGGCTTTTCTTTAACAAC
AGACACAGAGCAGCAGATTTCTATAATGAAGTTAACATAATAAGCAGTGTTGAGCACAAA
AATCTAGTCAGGCTGTTGGGATGCAGTTGCTCAGGGCCTGAAAGCCTTCTCATCTATGAA
TTTCTGCCAAATAAGAGTCTTGATCGCTTCATCTTCGATACAAACAGAGGTAAAGCACTG
AACTGGGAAAAGAGATGTGAGATAATCACTGGGACAGCAGAAGGTCTGGTCTACCTTCAT
GAAAATTCGAAGATCAGAATTATCCACAGAGATATAAAAGCCAGTAATATTTTGTTGGAT
TCAAAGATGCGTGCTAAAATAGCTGATTTTGGGTTGGCCAGGTCTTTCCAAGAAGATAAG
AGTCACATAAGCACTGCTATTGCAGGAACACTAGGATATATGGCTCCAGAGTACCTGGCC
CATGGCCAGTTAACAGAAAAGGCAGATGTCTACAGCTTTGGTGTGCTCTTGTTGGAGATT
GCCACAGGAAGGCAGAACAACAGGAGCAAAACTGCAGAATACTCAGACAGCCTAGTCACC
ATCGCATGGAAGCATTTCCAGCTAGGGACCTTGGAGGAACTTTTTGATCCAAATTTAATG
CTGCATAACCACGACAATGGCAACATTAAGAATGAAGTTTTGAGAGTGATGCAGATAGGA
CTTCTTTGCACCCAAGAGGTTCCATCGTTACGACCATCAATGTCAAAGGCCCTGCAGATG
CTGACAAAGAAGGATGAACATCTTCCTACGCCCACTAGTCCCCCATTTATAGATGAAAGG
ACCATGGAACTTAATGAGGCATGTGAGAACCCATCTTACCCCCTCAATGCTGCCATTTCT
GGTTCAGATGCCAGTATCTCCCACAGTTCTTTCTACCCCAGATGA

Peptide Sequence

PEP ID

VIT_01s0127g00140.t01
PEP Infomation

pep chromosome:12X:1:7490194:7493341:1 gene:VIT_01s0127g00140 transcript:VIT_01s0127g00140.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKMKQANPSAPSPSLLFFFILTLSVIELSAGDPRSRTIQMMCGNQREHNSTIFVINFVAM
MENISNQMRTSGFGVAVLGSAPDATYGLAQCYGDLSLLDCVLCYAEARTFLPQCFPFTTG
RIYLDGCFMRAQNYSFIEEYTGPSDHALCGNETRKNSTFQESARQAIKQAVADAPNNNGY
ARSKVMVPGTANESAYVLANCWRTLNAISCRACLENASSSILGCLPWSEGRALNTGCFMR
YSDTDFLNKEPDNGSSRGTIIIIVVSAVSAVIVLLVGGAIGVYILKQRKIQKKRRGSNDA
IKLVKTLHDSSLNFKYATLEKATGSFDNANKLGQGGFGTVYKGVLADGREIAVKRLFFNN
RHRAADFYNEVNIISSVEHKNLVRLLGCSCSGPESLLIYEFLPNKSLDRFIFDTNRGKAL
NWEKRCEIITGTAEGLVYLHENSKIRIIHRDIKASNILLDSKMRAKIADFGLARSFQEDK
SHISTAIAGTLGYMAPEYLAHGQLTEKADVYSFGVLLLEIATGRQNNRSKTAEYSDSLVT
IAWKHFQLGTLEELFDPNLMLHNHDNGNIKNEVLRVMQIGLLCTQEVPSLRPSMSKALQM
LTKKDEHLPTPTSPPFIDERTMELNEACENPSYPLNAAISGSDASISHSSFYPR

Transcript Sequence

Transcript ID

VIT_01s0127g00140.t01
Transcript Infomation

cdna chromosome:12X:1:7490194:7493341:1 gene:VIT_01s0127g00140 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGATGAAGCAAGCCAACCCATCAGCCCCTTCCCCTTCTCTTCTCTTCTTTTTTATC
CTAACTCTATCGGTGATAGAACTATCCGCCGGAGACCCCAGATCACGAACGATCCAAATG
ATGTGCGGGAACCAGCGTGAGCACAATTCAACCATCTTCGTCATCAACTTTGTGGCTATG
ATGGAAAATATCAGTAATCAAATGCGCACTTCTGGTTTTGGCGTGGCTGTTCTTGGCTCT
GCACCTGATGCTACCTATGGTCTTGCCCAATGCTATGGAGATCTGTCTTTGCTTGATTGT
GTATTATGCTACGCTGAGGCGCGAACATTTCTTCCCCAGTGCTTTCCTTTCACTACGGGT
CGCATTTACCTTGATGGTTGCTTTATGCGAGCTCAAAATTACAGCTTCATTGAGGAGTAT
ACAGGACCAAGTGACCATGCTTTGTGTGGAAACGAAACCCGAAAGAACTCCACGTTCCAG
GAGTCTGCAAGGCAGGCTATAAAGCAAGCAGTTGCTGATGCACCAAACAATAATGGGTAT
GCAAGGAGTAAGGTGATGGTGCCGGGAACAGCAAATGAGTCGGCCTATGTGCTGGCTAAT
TGCTGGAGGACTTTGAATGCAATATCATGTAGGGCGTGTCTGGAGAATGCATCGTCATCG
ATATTGGGATGCTTGCCTTGGTCTGAAGGGCGGGCACTGAACACAGGGTGCTTCATGAGA
TACTCAGATACAGATTTCCTCAACAAAGAACCAGATAATGGAAGTTCAAGGGGGACCATA
ATAATAATAGTAGTATCTGCTGTAAGTGCTGTGATTGTTCTTCTAGTAGGGGGAGCGATT
GGAGTTTATATCTTGAAGCAAAGAAAGATCCAAAAGAAAAGGAGAGGTTCCAACGATGCT
ATAAAATTAGTTAAGACCCTCCATGACAGTAGCTTGAACTTCAAATATGCTACACTTGAG
AAGGCCACAGGATCTTTTGACAATGCCAACAAGCTTGGACAAGGAGGATTTGGAACTGTT
TATAAGGGAGTTCTGGCTGATGGAAGAGAGATTGCTGTGAAGAGGCTTTTCTTTAACAAC
AGACACAGAGCAGCAGATTTCTATAATGAAGTTAACATAATAAGCAGTGTTGAGCACAAA
AATCTAGTCAGGCTGTTGGGATGCAGTTGCTCAGGGCCTGAAAGCCTTCTCATCTATGAA
TTTCTGCCAAATAAGAGTCTTGATCGCTTCATCTTCGATACAAACAGAGGTAAAGCACTG
AACTGGGAAAAGAGATGTGAGATAATCACTGGGACAGCAGAAGGTCTGGTCTACCTTCAT
GAAAATTCGAAGATCAGAATTATCCACAGAGATATAAAAGCCAGTAATATTTTGTTGGAT
TCAAAGATGCGTGCTAAAATAGCTGATTTTGGGTTGGCCAGGTCTTTCCAAGAAGATAAG
AGTCACATAAGCACTGCTATTGCAGGAACACTAGGATATATGGCTCCAGAGTACCTGGCC
CATGGCCAGTTAACAGAAAAGGCAGATGTCTACAGCTTTGGTGTGCTCTTGTTGGAGATT
GCCACAGGAAGGCAGAACAACAGGAGCAAAACTGCAGAATACTCAGACAGCCTAGTCACC
ATCGCATGGAAGCATTTCCAGCTAGGGACCTTGGAGGAACTTTTTGATCCAAATTTAATG
CTGCATAACCACGACAATGGCAACATTAAGAATGAAGTTTTGAGAGTGATGCAGATAGGA
CTTCTTTGCACCCAAGAGGTTCCATCGTTACGACCATCAATGTCAAAGGCCCTGCAGATG
CTGACAAAGAAGGATGAACATCTTCCTACGCCCACTAGTCCCCCATTTATAGATGAAAGG
ACCATGGAACTTAATGAGGCATGTGAGAACCCATCTTACCCCCTCAATGCTGCCATTTCT
GGTTCAGATGCCAGTATCTCCCACAGTTCTTTCTACCCCAGATGACCTTAAGAGGAGCTT
GAAATGAATGTTTTACAGCGTACAGGTAACTCACAAGCTGTGGGCATGTAAATGAAAAAC
CTGTCTCAGGTTAAGCCCATTCTTCCTCAACTTCATGTTGT