Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0026g02730.t01
CDS Infomation

cds chromosome:12X:1:12552197:12562139:-1 gene:VIT_01s0026g02730 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAGCGGCCTCTTCAGTCTCTGATTTAGGGATTCTGGACTCTGTTGACGATGCCTCC
ATCACAGAAATTATGGAGAGCTGGGACGGTTTCTGTAGAGCCACTGAAGCTCTCCTCAAC
GGACACGGCGATCTCTCCGTCGGATCCGAATTCGTTTCTCACGTTCACTCTCTCTGTAAG
CGCTCGCTCGGCTCTCTCGTTCAAGACCACTTTCTTCGCTCCCTGGAGGAAACTTTTGAG
AGAAATGGTGCTACGAGGTTCTGGCGGCATTTTGATGCTTACACCCACGTTGAAGTTATG
GAAATGAGTAAATCCCCTATTCAAGAGAATGGGATTCAGAAAGTATTATATAAAGCATTG
GATGATGTGTCTTTGGAAAAACAGTATCAGGAAAAGTGCCTGTTAATGCTGGTTCATGCT
TTACAGTCATACAAGGATAGTATATCAGAGGAAAGACACAACTCAGATGCAGAAAGAATC
CATCTTTTTTCTAAATATCAGTTAATAGTGTCTTCAGTTCTCATGACCACGCTTCCTCGG
CATTTCCCTGAGATACTCCACTGTTATTTTAAGGGAAGGTTGGAGGAGTTAAGTACAATT
ATGGCTGGAGAATATGAAGATGATAATGAATCTGACGACAAAGATGACATGGATTTAGAT
GAGAAAAATAAAGTCTCCTATAGAGGTGAAATGGATATCGATGAATGCTATCAGCGGAGA
AAGTTTTTAGAGAATAACAAATTGGTGAAAAACATAGGAAAGGTGGTTCGTGATCTTAGA
AATCTTGGATTTACATCCATGGCTGAAGATGCCTACGCTTCTGCTATTTTCTTGCTCTTG
AAGGACAAAGTTCATAATTTGGCTGGGGATGATTACAGGAGTTCTGTTTTGGAATCTATT
AAAGAGTGGATACAGGCTGTGCCTCTTCAATTCTTGTATGCACTTCTTGCTTATCTGGGT
GACTCTGTTAGTTATGATAATCCTTCATCTGGTCTCAAATCACCTTTGGCTTCACATCCC
TCTTCATGTTATCCTGGAATTGACACCCCCTCTGAAGGACTGATCAGATGGCAGTTGCGG
CTGGAGTATTTTGCTTACGAAACATTACAAGATTTAAGAATAGCCAAACTTTTTGAGATT
ATTGTGGATTACCCTGACAGTTCTCCTGCTATTGAAGACTTAAAACAGTGTCTTGAATAC
ACTGGACAACATTCCAAGTTGGTTGATTCATTTATATCTGCATTACGATATCGCTTGCTC
ACTGCTGGTGCCTCAACCAATGATATATTACACCAATATGTTTCAACTATTAAAGCACTG
AGGACCATAGACCCAGCAGGTGTTTTTCTTGAAGCAGTGGGTGAACCAATAAGGGACTAT
CTAAGGGGAAGAAAAGATACCATAAAATGCATTGTGACCATGCTTACAGATGGGACTGGT
GGGAATCCAAATGGACCTGGAAATACTGGTGATAGCCTTCTTGAAGAATTAAATAGAGAT
GAAGAAAATCAAGAGAATGCTGGTATTGATGATGACTTCAACATTGATGAAAAGCAAGAC
TGGATCAATGCAGAACGCTGGGAGCCTGACCCAGTAGAGGCTGACCCATCGAAGGGTAGC
AGGAACCGGAGGAAGGTTGACATACTTGGGATGATTGTTGGCATAATTGGTTCGAAGGAT
CAGCTAGTTAATGAATATCGTGTTATGCTGGCTGAAAAGCTTTTGAACAAATCTGATTAT
GACATTGACTCAGAGATACGTACTTTAGAACTCCTAAAGATACATTTTGGGGAGAGCAGC
ATGCAGAGGTGTGAGATTATGCTCAATGATTTGATTGATTCCAAAAGGACAAACTCCAAT
ATAAAAGCAACCATAACTCAGCCATCCCAAATAGGTTCTGAGCTAGGAGAAACTGGGGTG
TCTCTGGATATTCTGGATGCTACAATCATATCATCAAATTTCTGGCCGCCAATCCAGGAT
GAGGCTCTTAACATACCTGGGCCTGTGGACCAGCTGCTTGCTGATTATGCGAAAAGGTTT
CACAAAATCAAAACTCCTCGAAAGCTACTATGGAAGAAAAATCTTGGTACAGTCAAGCTG
GAGTTGCAATTTGAGGGTAGAGTGGTGCAGTTCACAGTGGCTCCTTTGCATGCAGCAATT
ATAATGCAATTCCAAGATCAAACAAGTTGGACCTCTAAGAATCTTGCAGCTTCTATTGGG
GTACCTGTGGATGTACTTAATCGTAGGATAAATTTCTGGATAAGCAAGGGAATTCTCTCG
GAATCACTGGTAACAGATCCTAATGACCACATATTTACCCTAGTGGATGATATGGTTGAG
CCCGGTAAGAATAGTGTTAATGCTGGGAGCTGTGAGGAGCTTCTTGTATGTGATGAGGAA
GGGGAGAGATCTGTAGCCTCTGTTGAGGATCAATTGCATAAAGAAATGATTGTGTATGAG
AAATTTATCATGGGGATGCTCACAAATTTTGGCAGCATGGCATTGGATCGGATTCATAAT
ACTCTTAAGATGTTTTGTTTAGCTGATCCTCCTTACGACAAATCACTGCAACAACTGCAA
AGCTTCTTATCTGGTCTTGTTTCAGAAGAGAAATTAGAAATAAGAGATGGAATGTACTTT
CTAAAGAAATAG

Peptide Sequence

PEP ID

VIT_01s0026g02730.t01
PEP Infomation

pep chromosome:12X:1:12552197:12562139:-1 gene:VIT_01s0026g02730 transcript:VIT_01s0026g02730.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEAASSVSDLGILDSVDDASITEIMESWDGFCRATEALLNGHGDLSVGSEFVSHVHSLCK
RSLGSLVQDHFLRSLEETFERNGATRFWRHFDAYTHVEVMEMSKSPIQENGIQKVLYKAL
DDVSLEKQYQEKCLLMLVHALQSYKDSISEERHNSDAERIHLFSKYQLIVSSVLMTTLPR
HFPEILHCYFKGRLEELSTIMAGEYEDDNESDDKDDMDLDEKNKVSYRGEMDIDECYQRR
KFLENNKLVKNIGKVVRDLRNLGFTSMAEDAYASAIFLLLKDKVHNLAGDDYRSSVLESI
KEWIQAVPLQFLYALLAYLGDSVSYDNPSSGLKSPLASHPSSCYPGIDTPSEGLIRWQLR
LEYFAYETLQDLRIAKLFEIIVDYPDSSPAIEDLKQCLEYTGQHSKLVDSFISALRYRLL
TAGASTNDILHQYVSTIKALRTIDPAGVFLEAVGEPIRDYLRGRKDTIKCIVTMLTDGTG
GNPNGPGNTGDSLLEELNRDEENQENAGIDDDFNIDEKQDWINAERWEPDPVEADPSKGS
RNRRKVDILGMIVGIIGSKDQLVNEYRVMLAEKLLNKSDYDIDSEIRTLELLKIHFGESS
MQRCEIMLNDLIDSKRTNSNIKATITQPSQIGSELGETGVSLDILDATIISSNFWPPIQD
EALNIPGPVDQLLADYAKRFHKIKTPRKLLWKKNLGTVKLELQFEGRVVQFTVAPLHAAI
IMQFQDQTSWTSKNLAASIGVPVDVLNRRINFWISKGILSESLVTDPNDHIFTLVDDMVE
PGKNSVNAGSCEELLVCDEEGERSVASVEDQLHKEMIVYEKFIMGMLTNFGSMALDRIHN
TLKMFCLADPPYDKSLQQLQSFLSGLVSEEKLEIRDGMYFLKK

Transcript Sequence

Transcript ID

VIT_01s0026g02730.t01
Transcript Infomation

cdna chromosome:12X:1:12552197:12562139:-1 gene:VIT_01s0026g02730 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GACCCTGCAATTTCAATTTCAAAGCAGGTCGCTCACCATAAGCTAGGGTTTCAAGAGAAG
CGACAATGGAAGCGGCCTCTTCAGTCTCTGATTTAGGGATTCTGGACTCTGTTGACGATG
CCTCCATCACAGAAATTATGGAGAGCTGGGACGGTTTCTGTAGAGCCACTGAAGCTCTCC
TCAACGGACACGGCGATCTCTCCGTCGGATCCGAATTCGTTTCTCACGTTCACTCTCTCT
GTAAGCGCTCGCTCGGCTCTCTCGTTCAAGACCACTTTCTTCGCTCCCTGGAGGAAACTT
TTGAGAGAAATGGTGCTACGAGGTTCTGGCGGCATTTTGATGCTTACACCCACGTTGAAG
TTATGGAAATGAGTAAATCCCCTATTCAAGAGAATGGGATTCAGAAAGTATTATATAAAG
CATTGGATGATGTGTCTTTGGAAAAACAGTATCAGGAAAAGTGCCTGTTAATGCTGGTTC
ATGCTTTACAGTCATACAAGGATAGTATATCAGAGGAAAGACACAACTCAGATGCAGAAA
GAATCCATCTTTTTTCTAAATATCAGTTAATAGTGTCTTCAGTTCTCATGACCACGCTTC
CTCGGCATTTCCCTGAGATACTCCACTGTTATTTTAAGGGAAGGTTGGAGGAGTTAAGTA
CAATTATGGCTGGAGAATATGAAGATGATAATGAATCTGACGACAAAGATGACATGGATT
TAGATGAGAAAAATAAAGTCTCCTATAGAGGTGAAATGGATATCGATGAATGCTATCAGC
GGAGAAAGTTTTTAGAGAATAACAAATTGGTGAAAAACATAGGAAAGGTGGTTCGTGATC
TTAGAAATCTTGGATTTACATCCATGGCTGAAGATGCCTACGCTTCTGCTATTTTCTTGC
TCTTGAAGGACAAAGTTCATAATTTGGCTGGGGATGATTACAGGAGTTCTGTTTTGGAAT
CTATTAAAGAGTGGATACAGGCTGTGCCTCTTCAATTCTTGTATGCACTTCTTGCTTATC
TGGGTGACTCTGTTAGTTATGATAATCCTTCATCTGGTCTCAAATCACCTTTGGCTTCAC
ATCCCTCTTCATGTTATCCTGGAATTGACACCCCCTCTGAAGGACTGATCAGATGGCAGT
TGCGGCTGGAGTATTTTGCTTACGAAACATTACAAGATTTAAGAATAGCCAAACTTTTTG
AGATTATTGTGGATTACCCTGACAGTTCTCCTGCTATTGAAGACTTAAAACAGTGTCTTG
AATACACTGGACAACATTCCAAGTTGGTTGATTCATTTATATCTGCATTACGATATCGCT
TGCTCACTGCTGGTGCCTCAACCAATGATATATTACACCAATATGTTTCAACTATTAAAG
CACTGAGGACCATAGACCCAGCAGGTGTTTTTCTTGAAGCAGTGGGTGAACCAATAAGGG
ACTATCTAAGGGGAAGAAAAGATACCATAAAATGCATTGTGACCATGCTTACAGATGGGA
CTGGTGGGAATCCAAATGGACCTGGAAATACTGGTGATAGCCTTCTTGAAGAATTAAATA
GAGATGAAGAAAATCAAGAGAATGCTGGTATTGATGATGACTTCAACATTGATGAAAAGC
AAGACTGGATCAATGCAGAACGCTGGGAGCCTGACCCAGTAGAGGCTGACCCATCGAAGG
GTAGCAGGAACCGGAGGAAGGTTGACATACTTGGGATGATTGTTGGCATAATTGGTTCGA
AGGATCAGCTAGTTAATGAATATCGTGTTATGCTGGCTGAAAAGCTTTTGAACAAATCTG
ATTATGACATTGACTCAGAGATACGTACTTTAGAACTCCTAAAGATACATTTTGGGGAGA
GCAGCATGCAGAGGTGTGAGATTATGCTCAATGATTTGATTGATTCCAAAAGGACAAACT
CCAATATAAAAGCAACCATAACTCAGCCATCCCAAATAGGTTCTGAGCTAGGAGAAACTG
GGGTGTCTCTGGATATTCTGGATGCTACAATCATATCATCAAATTTCTGGCCGCCAATCC
AGGATGAGGCTCTTAACATACCTGGGCCTGTGGACCAGCTGCTTGCTGATTATGCGAAAA
GGTTTCACAAAATCAAAACTCCTCGAAAGCTACTATGGAAGAAAAATCTTGGTACAGTCA
AGCTGGAGTTGCAATTTGAGGGTAGAGTGGTGCAGTTCACAGTGGCTCCTTTGCATGCAG
CAATTATAATGCAATTCCAAGATCAAACAAGTTGGACCTCTAAGAATCTTGCAGCTTCTA
TTGGGGTACCTGTGGATGTACTTAATCGTAGGATAAATTTCTGGATAAGCAAGGGAATTC
TCTCGGAATCACTGGTAACAGATCCTAATGACCACATATTTACCCTAGTGGATGATATGG
TTGAGCCCGGTAAGAATAGTGTTAATGCTGGGAGCTGTGAGGAGCTTCTTGTATGTGATG
AGGAAGGGGAGAGATCTGTAGCCTCTGTTGAGGATCAATTGCATAAAGAAATGATTGTGT
ATGAGAAATTTATCATGGGGATGCTCACAAATTTTGGCAGCATGGCATTGGATCGGATTC
ATAATACTCTTAAGATGTTTTGTTTAGCTGATCCTCCTTACGACAAATCACTGCAACAAC
TGCAAAGCTTCTTATCTGGTCTTGTTTCAGAAGAGAAATTAGAAATAAGAGATGGAATGT
ACTTTCTAAAGAAATAGCTGACATACAAAATGAGAAAATAGGATCAGCACATGCTCATTA
ATGAAAAATGTATGTGATTTGCATTGTAGATTGTTCTGTACATCATGTGCTGGTAGTGAT
TCTTCTCTCCTTGTTGGTTGCTT