Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0026g02700.t01
CDS Infomation

cds chromosome:12X:1:12438183:12440475:-1 gene:VIT_01s0026g02700 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCATGACTGGCTTGTCAAATACTTGTCCAAGTCAAGAACTGTTGCGGTCCCCATGCCT
TTCACTACTTATACCTACATTGCAGATCCTGCCAATGTAGAACATGTCCTCAAGACCAAC
TTTGCCAATTATCCCAAGGGTGAAGTGTATCATTCATACATGGAAGTACTGCTTGGAGAT
GGGATTTTCAATGTAGATGGTGAGCTCTGGAGGAGGCAGAGGAAGACTGCAAGCTTCGAG
TTTGCATCCAAGAACTTGAGGGATTTCAGCACTATTGTATTCAGAGAGTATAGCCTCAAG
CTCTCTGCTATTCTTAGTGAAGCCTCTTTCCACAACCGAGAAGTAGACATGCAGGATTTG
CTTATGAGGATGACGTTGGACTCCATATGTAAGGTGGGATTTGGTGTAGAAATTGGGACT
TTGGCTCCTAATCTACCAGAAAACTGCTTTGCTCGTGCTTTTGACACTGCAAACATCATT
GTCACACTTCGCTTCATCGACCCACTATGGAAAATAAAGAAATTTCTTAATGTAGGTTCA
GAATCTCTGCTTGATAAGAGCATTAAAGTCATCGATGATTTCACATACTCTGTTATTCGT
ACAAGGAAAGCAGAGATAGATCAAGCTCGTAAATCGCATGACGATAAGGCATCCCATCCT
GACCATTCTCAGATAAAGCATGATATATTATCAAGATTCATCGAGTTAGGTGAAAACCCA
GAAAGCAATTTAACCGACAAAAGCCTCCGAGATGTAGTGCTCAACTTTGTGATAGCTGGC
CGTGATACAACAGCAACAACTCTCTCATGGGCTGTGTACATGATGATGGCTCATGCCCAT
GTAGCTGACAAGCTTTACTCAGAGCTCAAAACTTTTGAAGAAGATCGAGCAAAAGAAGAT
AAAATTTCACTGCTCCATTATGACATAGAGGACTCCAAGTCATTCAATCAAAGAGTGACC
CAATTTGCAAGACTCTTGACCTATGATTCATTGGGGAGATTACATTACTTACATGCAGTG
ATCACAGAAACACTACGCTTGTACCCTGCAGTCCCTCAGGACCCCAAGGGCATATTGGAG
GACGATGTTTTGCCAGATGGAACCAGAGTAAAAGCAGGAGGCATGGTGACTTACGTCCCC
TACTCAATGGGTAGAATGGAGTACAACTGGGGTCCTGATGCAACGTTATTCAAGCCTGAG
AGATGGCTTAAAGAGGGGTTCTTCCAAAATGCATCTCCTTTCAAGTTCACTGCATTCCAG
GCTGGTCCAAGGATATGCCTTGGGAAGGACTCGGCATATCTCCAAATGAAGATGGCAATA
GCTTTATTGTGTAGGTTTTTCAAATTCAATTTAGTACAAGGGCACATAGTGAAGTACAGG
ATGATGACAATTTTATCTATGGCCAATGGATTAAAGGTTACCGTCTCCAGAAGATCTTAA

Peptide Sequence

PEP ID

VIT_01s0026g02700.t01
PEP Infomation

pep chromosome:12X:1:12438183:12440475:-1 gene:VIT_01s0026g02700 transcript:VIT_01s0026g02700.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MHDWLVKYLSKSRTVAVPMPFTTYTYIADPANVEHVLKTNFANYPKGEVYHSYMEVLLGD
GIFNVDGELWRRQRKTASFEFASKNLRDFSTIVFREYSLKLSAILSEASFHNREVDMQDL
LMRMTLDSICKVGFGVEIGTLAPNLPENCFARAFDTANIIVTLRFIDPLWKIKKFLNVGS
ESLLDKSIKVIDDFTYSVIRTRKAEIDQARKSHDDKASHPDHSQIKHDILSRFIELGENP
ESNLTDKSLRDVVLNFVIAGRDTTATTLSWAVYMMMAHAHVADKLYSELKTFEEDRAKED
KISLLHYDIEDSKSFNQRVTQFARLLTYDSLGRLHYLHAVITETLRLYPAVPQDPKGILE
DDVLPDGTRVKAGGMVTYVPYSMGRMEYNWGPDATLFKPERWLKEGFFQNASPFKFTAFQ
AGPRICLGKDSAYLQMKMAIALLCRFFKFNLVQGHIVKYRMMTILSMANGLKVTVSRRS

Transcript Sequence

Transcript ID

VIT_01s0026g02700.t01
Transcript Infomation

cdna chromosome:12X:1:12438183:12440475:-1 gene:VIT_01s0026g02700 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACATGGGGATATTGATGCTAGCTTGCACTGTCTTGACGTGGATTGCCATCCATAGGTGGA
GTCAGAGGCATACAAAAGGCCCCAAAACGTGGCCACTAGTAGGGGCAGCAATTGAGCAGC
TAATAAACTATGACAGAATGCATGACTGGCTTGTCAAATACTTGTCCAAGTCAAGAACTG
TTGCGGTCCCCATGCCTTTCACTACTTATACCTACATTGCAGATCCTGCCAATGTAGAAC
ATGTCCTCAAGACCAACTTTGCCAATTATCCCAAGGGTGAAGTGTATCATTCATACATGG
AAGTACTGCTTGGAGATGGGATTTTCAATGTAGATGGTGAGCTCTGGAGGAGGCAGAGGA
AGACTGCAAGCTTCGAGTTTGCATCCAAGAACTTGAGGGATTTCAGCACTATTGTATTCA
GAGAGTATAGCCTCAAGCTCTCTGCTATTCTTAGTGAAGCCTCTTTCCACAACCGAGAAG
TAGACATGCAGGATTTGCTTATGAGGATGACGTTGGACTCCATATGTAAGGTGGGATTTG
GTGTAGAAATTGGGACTTTGGCTCCTAATCTACCAGAAAACTGCTTTGCTCGTGCTTTTG
ACACTGCAAACATCATTGTCACACTTCGCTTCATCGACCCACTATGGAAAATAAAGAAAT
TTCTTAATGTAGGTTCAGAATCTCTGCTTGATAAGAGCATTAAAGTCATCGATGATTTCA
CATACTCTGTTATTCGTACAAGGAAAGCAGAGATAGATCAAGCTCGTAAATCGCATGACG
ATAAGGCATCCCATCCTGACCATTCTCAGATAAAGCATGATATATTATCAAGATTCATCG
AGTTAGGTGAAAACCCAGAAAGCAATTTAACCGACAAAAGCCTCCGAGATGTAGTGCTCA
ACTTTGTGATAGCTGGCCGTGATACAACAGCAACAACTCTCTCATGGGCTGTGTACATGA
TGATGGCTCATGCCCATGTAGCTGACAAGCTTTACTCAGAGCTCAAAACTTTTGAAGAAG
ATCGAGCAAAAGAAGATAAAATTTCACTGCTCCATTATGACATAGAGGACTCCAAGTCAT
TCAATCAAAGAGTGACCCAATTTGCAAGACTCTTGACCTATGATTCATTGGGGAGATTAC
ATTACTTACATGCAGTGATCACAGAAACACTACGCTTGTACCCTGCAGTCCCTCAGGACC
CCAAGGGCATATTGGAGGACGATGTTTTGCCAGATGGAACCAGAGTAAAAGCAGGAGGCA
TGGTGACTTACGTCCCCTACTCAATGGGTAGAATGGAGTACAACTGGGGTCCTGATGCAA
CGTTATTCAAGCCTGAGAGATGGCTTAAAGAGGGGTTCTTCCAAAATGCATCTCCTTTCA
AGTTCACTGCATTCCAGGCTGGTCCAAGGATATGCCTTGGGAAGGACTCGGCATATCTCC
AAATGAAGATGGCAATAGCTTTATTGTGTAGGTTTTTCAAATTCAATTTAGTACAAGGGC
ACATAGTGAAGTACAGGATGATGACAATTTTATCTATGGCCAATGGATTAAAGGTTACCG
TCTCCAGAAGATCTTAAGATGC