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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0026g02620.t01
CDS Infomation

cds chromosome:12X:1:12260117:12261648:-1 gene:VIT_01s0026g02620 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:A5AIN5]
Sequence

ATGGCACTAGTTGGTCTGTTCTTGGTGGGTTTTCTGTCTATGGTGTCAAGTGTTCATGGT
CAAGGATGGATCAATGCTCATGCCACCTTCTATGGTGGGGGTGATGCTTCTGGGACAATG
GGTGGTGCTTGTGGGTATGGAAACTTGTACAGCCAGGGGTATGGAACAAACACAGCAGCT
TTGAGCACAGCTCTGTTCAACAGTGGATTGAGCTGTGGATCTTGCTATGAGATTAGGTGC
GTGAATGACCCAAAATGGTGCCTGCCTGGCTCCATTGTGGTCACAGCCACCAATTTCTGT
CCACCAAACAATGCCCTCTCAAACAATGCAGGAGGGTGGTGTAACCCTCCTCTGCAACAC
TTTGATCTCTCTGAGCCTGTCTTCCAACACATTGCCCAATTCAGAGCTGGGATTGTCCCC
GTCTCCTACAGAAGGGTACCCTGCAGCAGGAGGGGAGGCATAAGGTTTACCATCAATGGC
CACTCTTACTTCAACCTAGTCCTCATCACAAACGTTGGTGGAGCTGGTGATGTCCATGCT
GTGGCAATCAAAGGGTCAAGGACTGGTTGGCAGTCATTGTCCAGGAACTGGGGCCAAAAC
TGGCAGAGCAACACCTATCTTAATGGACAGAGCCTCTCGTTCAAGGTCACCACCAGTGAT
GGCCACACCGTTGTCTCCTACAATTGTGTCCCTGCTGGCTGGTCCTTTGGCCAGACCTTC
AGTGGAGCACAGTTCCGCTAA

Peptide Sequence

PEP ID

VIT_01s0026g02620.t01
PEP Infomation

pep chromosome:12X:1:12260117:12261648:-1 gene:VIT_01s0026g02620 transcript:VIT_01s0026g02620.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:A5AIN5]
Sequence

MALVGLFLVGFLSMVSSVHGQGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAA
LSTALFNSGLSCGSCYEIRCVNDPKWCLPGSIVVTATNFCPPNNALSNNAGGWCNPPLQH
FDLSEPVFQHIAQFRAGIVPVSYRRVPCSRRGGIRFTINGHSYFNLVLITNVGGAGDVHA
VAIKGSRTGWQSLSRNWGQNWQSNTYLNGQSLSFKVTTSDGHTVVSYNCVPAGWSFGQTF
SGAQFR

Transcript Sequence

Transcript ID

VIT_01s0026g02620.t01
Transcript Infomation

cdna chromosome:12X:1:12260117:12261648:-1 gene:VIT_01s0026g02620 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:A5AIN5]
Sequence

CAGGAAAATGGCACTAGTTGGTCTGTTCTTGGTGGGTTTTCTGTCTATGGTGTCAAGTGT
TCATGGTCAAGGATGGATCAATGCTCATGCCACCTTCTATGGTGGGGGTGATGCTTCTGG
GACAATGGGTGGTGCTTGTGGGTATGGAAACTTGTACAGCCAGGGGTATGGAACAAACAC
AGCAGCTTTGAGCACAGCTCTGTTCAACAGTGGATTGAGCTGTGGATCTTGCTATGAGAT
TAGGTGCGTGAATGACCCAAAATGGTGCCTGCCTGGCTCCATTGTGGTCACAGCCACCAA
TTTCTGTCCACCAAACAATGCCCTCTCAAACAATGCAGGAGGGTGGTGTAACCCTCCTCT
GCAACACTTTGATCTCTCTGAGCCTGTCTTCCAACACATTGCCCAATTCAGAGCTGGGAT
TGTCCCCGTCTCCTACAGAAGGGTACCCTGCAGCAGGAGGGGAGGCATAAGGTTTACCAT
CAATGGCCACTCTTACTTCAACCTAGTCCTCATCACAAACGTTGGTGGAGCTGGTGATGT
CCATGCTGTGGCAATCAAAGGGTCAAGGACTGGTTGGCAGTCATTGTCCAGGAACTGGGG
CCAAAACTGGCAGAGCAACACCTATCTTAATGGACAGAGCCTCTCGTTCAAGGTCACCAC
CAGTGATGGCCACACCGTTGTCTCCTACAATTGTGTCCCTGCTGGCTGGTCCTTTGGCCA
GACCTTCAGTGGAGCACAGTTCCGCTAAACACTTTGGAGCTGCTTCCCCTATATTTAACT
ATAGCTTGCTAGGAGACATATAATATATACCACTTGGTATAGTTAGTATTGTCAATTTAG
TATATGAGAGGTATACTGTTGTGGTTGGGGTCGATCTTGGCCTCTTCTTGGGTCAAAAAC
GATAAAGGGTTTTCTTTTTTTTTAAATAACCCTAATCATTTTAATTTGAATATGTCATTG
TGGCCTTGTAGGGGTACCCTATTCAATGACCCCTTATTCTTGAGGTCCTTTTTCATGGCA
GAGGTGGTCTTTTACCGCCCGCCACTAGTATCTGAATTGCAATTTGCCTTATTATGAAAT
TTTTGCTTGTAAGGTCATTGTAATCAGCTCCGGCTGAATGTGCCCTCAGA