Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0026g02550.t01
CDS Infomation

cds chromosome:12X:1:12169147:12173524:-1 gene:VIT_01s0026g02550 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAAAATCAAGATATGAGCTTGGTTCTGTCAACTGATGCAAAGCCCAGGCTAAAATGG
ACTCCGGAACTTCATCATCGGTTTGTTGAAGCTGTGGCTCACCTTGGAGGGCCAGACAAG
GCAACACCGAAGACTTTGATGAGGGTGATGGGAGTACCTGGACTGACTCTGTACCACTTG
AAGAGTCATTTACAGAAATATAGGCTGGGGAAAAGTCAGCAGGCAGAAACCTTCAGTGAC
AACAATCAAGAAGATTACTGCGAGAATCAGAACAGAGAGATTCATTTTGATAGGGAAACC
GGTGATGGAACTCAGAATCCGATTAATGAAAGCTTGCAGATAGCTCAGGCTCTACAAGTG
CAATTGGAGGTGCAGAGGAAACTTCATGAACATATTGAGGTGCAGAGACATTTGCAGCTG
CGTATTGAAGCCCAAGGAAAGTATTTACAGTCAGTATTAAAGAAAGCTCAAGAAACGCTT
GCTGGCTATAATTCTTCTTCTGTAGGGGTGGAACTGGCAAAAGCTGAACTCACTCAGCTG
GTCTCTATTTTTGACACTGGGTGCCCAAGTTCTTCATTCTCAGAATTAACAGAAACAGGA
GGTTCTGGCTTAAAGGATAAAGAGAGGAAACCAATGAGGGGCACAGGATGTTCCCTGGAA
AGCTCCTTAACATCCTCAGAGAGCTCTGGGAGAAAAGAAGAGAAGCAACCGAAGAATGAG
AATGGGAACACCAATAAGTGTACTTCCATGGCTCCTACATTAATGGAGATCCATCCTGGA
GATAGCCAAGCTTGGAAGAGTGGTTCGAGCAATCAAGCTAGTGGAAGAAAGAGAAACGGA
AGCACCATTTCTGATGGAAATTGTGTGGAGCAGCCCTCTGGTAAAAGATCACCAACCTAT
GCAGGGAAAACTGGTGACCGGTTGAGAAAATTAGGATTATTAGAGACGCTTGATCTGAAT
ACCCAATATCAGATCGACATTGATTCTGCTCCAAAAGCAATAGATTTGAACTGCAAGGAA
TAG

Peptide Sequence

PEP ID

VIT_01s0026g02550.t01
PEP Infomation

pep chromosome:12X:1:12169147:12173524:-1 gene:VIT_01s0026g02550 transcript:VIT_01s0026g02550.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MQNQDMSLVLSTDAKPRLKWTPELHHRFVEAVAHLGGPDKATPKTLMRVMGVPGLTLYHL
KSHLQKYRLGKSQQAETFSDNNQEDYCENQNREIHFDRETGDGTQNPINESLQIAQALQV
QLEVQRKLHEHIEVQRHLQLRIEAQGKYLQSVLKKAQETLAGYNSSSVGVELAKAELTQL
VSIFDTGCPSSSFSELTETGGSGLKDKERKPMRGTGCSLESSLTSSESSGRKEEKQPKNE
NGNTNKCTSMAPTLMEIHPGDSQAWKSGSSNQASGRKRNGSTISDGNCVEQPSGKRSPTY
AGKTGDRLRKLGLLETLDLNTQYQIDIDSAPKAIDLNCKE

Transcript Sequence

Transcript ID

VIT_01s0026g02550.t01
Transcript Infomation

cdna chromosome:12X:1:12169147:12173524:-1 gene:VIT_01s0026g02550 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAGATTCTCTCCACCCCATTCAAGTCAAAGAAGAAAGAAAAAAAAAAATTAAAATTAAA
CAAAGTTGATATGAAAGGGGGAAATAAGAGATGGAGGAAAAGAAGAGCCACAGCTCGTGG
CATATATTCCTCCAACATAACCCCACTTATGTTTCCAGATATGGAGTGAGAACATAGGAC
TGGCCAACAACTCCAAATTATAAAGAGAACTACAGCTGCCACATATTGAAGTAGAGCTGG
AAGGATCAAAACCCATATTTATGCTCCACTCTTCTGTCTGTCTCTGATCCTTATAACACT
CGTGGGTCTTCCCAATATGCAAAATCAAGATATGAGCTTGGTTCTGTCAACTGATGCAAA
GCCCAGGCTAAAATGGACTCCGGAACTTCATCATCGGTTTGTTGAAGCTGTGGCTCACCT
TGGAGGGCCAGACAAGGCAACACCGAAGACTTTGATGAGGGTGATGGGAGTACCTGGACT
GACTCTGTACCACTTGAAGAGTCATTTACAGAAATATAGGCTGGGGAAAAGTCAGCAGGC
AGAAACCTTCAGTGACAACAATCAAGAAGATTACTGCGAGAATCAGAACAGAGAGATTCA
TTTTGATAGGGAAACCGGTGATGGAACTCAGAATCCGATTAATGAAAGCTTGCAGATAGC
TCAGGCTCTACAAGTGCAATTGGAGGTGCAGAGGAAACTTCATGAACATATTGAGGTGCA
GAGACATTTGCAGCTGCGTATTGAAGCCCAAGGAAAGTATTTACAGTCAGTATTAAAGAA
AGCTCAAGAAACGCTTGCTGGCTATAATTCTTCTTCTGTAGGGGTGGAACTGGCAAAAGC
TGAACTCACTCAGCTGGTCTCTATTTTTGACACTGGGTGCCCAAGTTCTTCATTCTCAGA
ATTAACAGAAACAGGAGGTTCTGGCTTAAAGGATAAAGAGAGGAAACCAATGAGGGGCAC
AGGATGTTCCCTGGAAAGCTCCTTAACATCCTCAGAGAGCTCTGGGAGAAAAGAAGAGAA
GCAACCGAAGAATGAGAATGGGAACACCAATAAGTGTACTTCCATGGCTCCTACATTAAT
GGAGATCCATCCTGGAGATAGCCAAGCTTGGAAGAGTGGTTCGAGCAATCAAGCTAGTGG
AAGAAAGAGAAACGGAAGCACCATTTCTGATGGAAATTGTGTGGAGCAGCCCTCTGGTAA
AAGATCACCAACCTATGCAGGGAAAACTGGTGACCGGTTGAGAAAATTAGGATTATTAGA
GACGCTTGATCTGAATACCCAATATCAGATCGACATTGATTCTGCTCCAAAAGCAATAGA
TTTGAACTGCAAGGAATAGGGATGTGCATCTTTTTAATGCTTCTTAGACCTTCACACCAG
ATGGATTTTAGTAATATGGTTTATATAAAGCAAACTTGGTTGGCTCTTGGAGTTTAAATA
TTGTCTATAAACTATGTATATCGATATGTGTACGGACCCTGAGGAACTTTTGAAAGTATA
TCCATGTCAAAAGAAGTTATATATTTTGTGTGGATCAACTATCTTCCATATCATCCATTG
TATTCTCCTCTTTTGTGCAATTCGAAGAATAAATTGAAGAAAAAATAAGAGAAAATATTT
CCATTTATTGCTTCAATAAAAAGGGGGTGAAAGAGAGGGAAAAAAAACATGACCTTATAC
AAATATGGAAGAAAAAAATGTACAAAATTTCTT