Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0026g02080.t01
CDS Infomation

cds chromosome:12X:1:11464781:11468003:1 gene:VIT_01s0026g02080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTGGAGGGTCGGTCCTGTCTGTTTTCAAGGGCATTACCGAGCTCCTGCGAACAAGAA
AGCAACTGGTCTTACATGACTTACCGGGTCGAGAAAAAAGAGAAACGCCCATTAGAAATT
GATGCAGAAGAAGAACTCCAAGTTGAAGATGCAAATGGAAAGTGCCCACCAGATATTGAT
GCCCAAGAAAAACAAGTCATCCCAGCCATAAAAAGGAGACGCCCATTAGAATTTGATAGC
GAAGAAGAGTTCCGAATCAACCTGGCAATTGGAAAGTGCCCACTGGAAATTGATTTAGAA
GACCAACACCACCCTGATGTTGCAGGTGGGAAGCGGCCACTAGAAATTGATGAAGAAGAA
CCCCAATTAAGTTCGTTCTTTAAGCTGACCGAAGCTCATGAAAGTGTCGAACCAACTCCG
ACCATAAGTGATCTCACATTATCCCCTGAAGATCAATCCCATAAACAGGGTCCCCCAGAG
GATGAGTCAGATAAGCCCGGAATCAACCTCTCTCTGTCATTGGCAGACCAATCCAATAGC
CAGCATCAAGCTGAATTTAATTCAGATTTGGATTCCCTTATCCAACCCATTGGCAGAGAC
TTGTCAATTAGTTGTCTCATCCGATGCTCAAGGTCGGATTATGGTTTTATTGCTTCTCTA
AATCGAAGCTTTCGTTCGATAATTCGGAGTGGTGAGCTCTACAGAGAAAGGCGGAAGAAC
GGGGTGATTGAACACTGGATTTATTTTTCTTGTCAACTTCTTGAATGGGAAGCTTTTGAT
CCAATTCGCCATCGTTGGATGCGATTGCCAACAATGACCTTCAATGAATGCTTCATGTGT
TCAGATAAGGAGTCTTTGGCTGTGGGCACTGAACTTCTTGTATTTGGGAAGGAGGTGATG
TCCCACGTTATCTATAGGTACAGCATTTTAACAAACTCATGGTCTTCTGGAATGAGTATG
AACGCGCCAAGATGCTTGTTTGGGTCTGCCAGCCTGGGGGAGATTGCAATTTTAGCTGGT
GGCTGTGATTCACAGGGAAACATCTTGAGCTCTGCAGAACTTTATAACTCCGAGACAGGA
GCTTGGGAGATGCTACCAAGCATGAATAAACCGAGGAAGATGTGTTCTGGGGTATTTATG
GATGGCAAGTTTTATGTCATTGGGGGAATTGGAGGAAGTGACTCAAAGCCCCTTCCATGC
GGAGAGGAGTATAATTTGCAGACAAGAGTTTGGACTGAAATTGCTGACATGTCCCCTGTA
CGAAGTGGTGCACCCAGGGAGAATGAGACTGCTGCAGCTGAGGCTCCTCCTCTAGTAGCA
GTAGTAAACAATGAATTATATGCAGCTGATTACGCAGACATGGAGGTGAGGAAATATGAA
AAGGAGAGTAGACTGTGGCTTACAGTGGGGAGGTTGCCTGAACGGGCGGTTTCAATGAAT
GGTTGGGGTCTTGCATTTAGAGCATGTGGAGATAAACTTGTTGTCATTGGCGGACCCAGA
GCTTTGGGCGAAGGGTTTATAGAGCTCAATTCATGGGTCCCAAGTGAAGGGCCTCCACAG
TGGAACGTGCTTGCTGTGAAGCAATCGGGTAACTTTGTCTATAATTGTGCTGTGATGGGA
TGCTGA

Peptide Sequence

PEP ID

VIT_01s0026g02080.t01
PEP Infomation

pep chromosome:12X:1:11464781:11468003:1 gene:VIT_01s0026g02080 transcript:VIT_01s0026g02080.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLEGRSCLFSRALPSSCEQESNWSYMTYRVEKKEKRPLEIDAEEELQVEDANGKCPPDID
AQEKQVIPAIKRRRPLEFDSEEEFRINLAIGKCPLEIDLEDQHHPDVAGGKRPLEIDEEE
PQLSSFFKLTEAHESVEPTPTISDLTLSPEDQSHKQGPPEDESDKPGINLSLSLADQSNS
QHQAEFNSDLDSLIQPIGRDLSISCLIRCSRSDYGFIASLNRSFRSIIRSGELYRERRKN
GVIEHWIYFSCQLLEWEAFDPIRHRWMRLPTMTFNECFMCSDKESLAVGTELLVFGKEVM
SHVIYRYSILTNSWSSGMSMNAPRCLFGSASLGEIAILAGGCDSQGNILSSAELYNSETG
AWEMLPSMNKPRKMCSGVFMDGKFYVIGGIGGSDSKPLPCGEEYNLQTRVWTEIADMSPV
RSGAPRENETAAAEAPPLVAVVNNELYAADYADMEVRKYEKESRLWLTVGRLPERAVSMN
GWGLAFRACGDKLVVIGGPRALGEGFIELNSWVPSEGPPQWNVLAVKQSGNFVYNCAVMG
C

Transcript Sequence

Transcript ID

VIT_01s0026g02080.t01
Transcript Infomation

cdna chromosome:12X:1:11464781:11468003:1 gene:VIT_01s0026g02080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGGAGAGAGAGAAAGGACCCCTCCAAAGATTTTGCCAATTGCCACAAAGCCCAAACCACA
CCCAAAGGCCAAAGGTATTGTTGATTTGCAGAGAGAATCCAAAGGACGAAAGAGAGACTG
AAACTGCATAGCCAGAGATATACGGAAAAACAAAAGAGATACACTATTAATCTTCTTAAT
TATTTCCAATCAACTCCTCTTTCTTCTTATCCAATCCGCGTAAGTCCTCTTCGTATTACT
TACTACTCACTTTGCTTTTCTTTGTTTTCTTCTTCTTTCTCCGTTCATACAAATAATTGC
TCAATTTTTTTTTTCTTTTATTAATAACACAAACCTGGACAGATCTAATCTAATCTAGTT
TGGGGTTTTGGTTTTCAAATTAGAGTGTTAGAGTTCTGGCTTTGATCATTTGTTGTTGTG
CCTTAGCTGGATGAAATTTGGAGATCTGGGTTGGCCAATTTTCTGAGCGGTGATTCATTT
TTTTTTTCTCCCTCGGGTTTTGGGATTGTGGGCTGTTTTTGTTATTGAAGTTTTGATTGT
TCGTGGTGTTTTTGGGGGTATCGGTTGTTCTCATTTTTGACGAATTTGGTGGTTCAAGAG
GGGATTTTGAATTCGGAAACTTACAAGTTGTTGAAATAATTGGTGTTTCTTTCTCTTAAT
CTGGATCGTTGTTCCTTGGATTCAGATTGGTGAGCTTTGATATAATAGTAAAAAAGGTTG
GATTTTCATTTAATTCTCCTCGTTTTTGTTTCTGAGTTTTCCCTATTTCATGAAACCATT
TACGAATTAGGGGTTTTAGATTTTCAATCTCTTAAAAAAAAAAAAAAATTCCCACTTTCC
CCCCCTATTTGAATAGGTTCGATTCTGTATTTTGACCGGATTTTGAGGGACTCGGGTGCT
TCAGTTATTGATTTTTGGCTGCCGATTTCATTGTGGTAAGGAAGAAAGAAGGCTTTGGAT
TGGACTGGCTTCGTGAATTTGAAGCTGTTCCAGTGCTGAATTACAGAGACATGTTGGAGG
GTCGGTCCTGTCTGTTTTCAAGGGCATTACCGAGCTCCTGCGAACAAGAAAGCAACTGGT
CTTACATGACTTACCGGGTCGAGAAAAAAGAGAAACGCCCATTAGAAATTGATGCAGAAG
AAGAACTCCAAGTTGAAGATGCAAATGGAAAGTGCCCACCAGATATTGATGCCCAAGAAA
AACAAGTCATCCCAGCCATAAAAAGGAGACGCCCATTAGAATTTGATAGCGAAGAAGAGT
TCCGAATCAACCTGGCAATTGGAAAGTGCCCACTGGAAATTGATTTAGAAGACCAACACC
ACCCTGATGTTGCAGGTGGGAAGCGGCCACTAGAAATTGATGAAGAAGAACCCCAATTAA
GTTCGTTCTTTAAGCTGACCGAAGCTCATGAAAGTGTCGAACCAACTCCGACCATAAGTG
ATCTCACATTATCCCCTGAAGATCAATCCCATAAACAGGGTCCCCCAGAGGATGAGTCAG
ATAAGCCCGGAATCAACCTCTCTCTGTCATTGGCAGACCAATCCAATAGCCAGCATCAAG
CTGAATTTAATTCAGATTTGGATTCCCTTATCCAACCCATTGGCAGAGACTTGTCAATTA
GTTGTCTCATCCGATGCTCAAGGTCGGATTATGGTTTTATTGCTTCTCTAAATCGAAGCT
TTCGTTCGATAATTCGGAGTGGTGAGCTCTACAGAGAAAGGCGGAAGAACGGGGTGATTG
AACACTGGATTTATTTTTCTTGTCAACTTCTTGAATGGGAAGCTTTTGATCCAATTCGCC
ATCGTTGGATGCGATTGCCAACAATGACCTTCAATGAATGCTTCATGTGTTCAGATAAGG
AGTCTTTGGCTGTGGGCACTGAACTTCTTGTATTTGGGAAGGAGGTGATGTCCCACGTTA
TCTATAGGTACAGCATTTTAACAAACTCATGGTCTTCTGGAATGAGTATGAACGCGCCAA
GATGCTTGTTTGGGTCTGCCAGCCTGGGGGAGATTGCAATTTTAGCTGGTGGCTGTGATT
CACAGGGAAACATCTTGAGCTCTGCAGAACTTTATAACTCCGAGACAGGAGCTTGGGAGA
TGCTACCAAGCATGAATAAACCGAGGAAGATGTGTTCTGGGGTATTTATGGATGGCAAGT
TTTATGTCATTGGGGGAATTGGAGGAAGTGACTCAAAGCCCCTTCCATGCGGAGAGGAGT
ATAATTTGCAGACAAGAGTTTGGACTGAAATTGCTGACATGTCCCCTGTACGAAGTGGTG
CACCCAGGGAGAATGAGACTGCTGCAGCTGAGGCTCCTCCTCTAGTAGCAGTAGTAAACA
ATGAATTATATGCAGCTGATTACGCAGACATGGAGGTGAGGAAATATGAAAAGGAGAGTA
GACTGTGGCTTACAGTGGGGAGGTTGCCTGAACGGGCGGTTTCAATGAATGGTTGGGGTC
TTGCATTTAGAGCATGTGGAGATAAACTTGTTGTCATTGGCGGACCCAGAGCTTTGGGCG
AAGGGTTTATAGAGCTCAATTCATGGGTCCCAAGTGAAGGGCCTCCACAGTGGAACGTGC
TTGCTGTGAAGCAATCGGGTAACTTTGTCTATAATTGTGCTGTGATGGGATGCTGAAGAG
GTGGATTTTGATGGTACCATGTGTACTATAACATGCCTCCCTTTGAATGGGTCGCACAAG
ATTGGTTTGTCCATCTGCACCTGATTCTTGCTAATGGGTAATTTCCCCTTTCTTTTAATT
TCTTTTACTTTATTGGGTGGGGGAGGATGGGGAGGAATTTCAGATTTTACTCAAGATTCA
ATAGAATGTTTTCTTGCAAGGTGATCTTGAGTTTTTATTTTTTATTTTTAAATTTTATTT
ATCTTTTCTTCCATCGAAATTGTGTCTTCCCTCATTCCAGTGACATGAGAACTTTCAAAG
GTTGGTGTTATTTAGCACAGGGATAGTTTAATAATTTGAAGTACCGATACATTGGCCGGT
TGTCATTAGTGTTGTTGAAGCCTTTTCATTTTCCTTTTTTTTTTTTCCTTTCTTCCTTCT
AAAAATCACAGGAGTACTAGTTATATGGGTTTCATAATCCTTAATTTTCTTGCATTGTCC
TCAAGAGAGAAAATAAGTTCTAAGAGGTTGTCATTCTGGACCATGCTTATGTACTAATTA
CATTCATCATTGCAATTGATGGGCTCTGTATTTTGAGCCTTTT