Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_01s0026g01680.t01
CDS Infomation	cds chromosome:12X:1:10846297:10848232:1 gene:VIT_01s0026g01680 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:D7TNE1]
Sequence	ATGGCAGCACCTAAATCCAATTCATTGCTTCTCCTGTTTGTGGTGATGTTCATGGTGGTA GTCCCAACAATACGAGCCCACATTGCGGAATACGATGACTACTGGAAAGCGCGGGAAAAG GAAGCCAAGACAGTTGCAATCGACGCATTTGATCCCAGCCCAGAGGATGTCAATGACGAT TTCAACAAGAATGTTGAGAAATCGATATTCGGAAAGAATGGCACGAGAAGGAACCTGAAA GTAAACAAGGGCCCATGCAAGGCCACAAACCCCATTGATCGATGCTGGAGATGCCGTCGC AACTGGGCGATGGATCGCAGGAGGCTAGCCGACTGCGTCCTTGGTTTTGGGCGGAGAACA GTGGGAGGAAAGCACGGGAGGTTATACATTGTGACTGATCCGTCCGACAATGACATGCTT AATCCTAAGCCTGGAACCTTACGCTACGCCGTCATCCAGCCACAGCCACTGTGGATCGTG TTTGGGCGCAGTATGATAATTAAGCTGAAACAGGAGCTGATGGTGACCAGTGACAAAACC ATTGACGGAAGGGGAGTCAATGTCCACATCGCATATGGTGCCGGCATTACGATTCAGTTC GCCAGGAATGTGATCATCCATGGCCTCCACATTCACGACATTGTTTCACGCCCAGGAGGA CTTATTAGGGATTCTGTCCATCACTTCGGCTTGAGAACCAGGAGCGATGGCGATGGAATC TCCATCTTTGGCTCATCCCACGTTTGGATTGACCATAACTCCATGTCCAAGTGCGAGGAC GGCCTGGTCGATGCCATCCAAGGATCCACCGCTATCACCATCTCCAACAACCATTTTACC AAGCACAATGAGACGATGTTGTTAGGCGCAAGTGATGGGTACTCGGGCGATATCATAATG CAAGTGACCGTGGCATTCAACCATTTCGGGAGGGGATTGATTCAAAGGATGCCAAGGTGC CGATGGGGGTTTTTCCATGTTGTGAACAACGACTACACCCACTGGAACATGTACGCTGTG GGTGGTAGTGCACATCCTACCATAGTCAGCCAGGGCAACCGATACGTCGCTGCCCCCTTA ATGGATCCAAAGCATGACGCTAAGGAGGTGACCAAGAGAGACCATGCGACGAAAGCAGAG TGGAGCAAGTGGACATGGAGATCAGAGGGAGATCTGATGGTAAATGGAGCCTTCTTTGTT CAATCGGGGGTGCCTTTTAAGAAAAAGCCTTTCTCCAGATATGATATGATCAAAGCAAAG CCAGGCAAATTTGTGCCCAGACTCACTCGCTACTCAGGCGCCCTTACTTGCTGGCGTACC TCACCCTGTTAA

Peptide Sequence

PEP ID	VIT_01s0026g01680.t01
PEP Infomation	pep chromosome:12X:1:10846297:10848232:1 gene:VIT_01s0026g01680 transcript:VIT_01s0026g01680.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:D7TNE1]
Sequence	MAAPKSNSLLLLFVVMFMVVVPTIRAHIAEYDDYWKAREKEAKTVAIDAFDPSPEDVNDD FNKNVEKSIFGKNGTRRNLKVNKGPCKATNPIDRCWRCRRNWAMDRRRLADCVLGFGRRT VGGKHGRLYIVTDPSDNDMLNPKPGTLRYAVIQPQPLWIVFGRSMIIKLKQELMVTSDKT IDGRGVNVHIAYGAGITIQFARNVIIHGLHIHDIVSRPGGLIRDSVHHFGLRTRSDGDGI SIFGSSHVWIDHNSMSKCEDGLVDAIQGSTAITISNNHFTKHNETMLLGASDGYSGDIIM QVTVAFNHFGRGLIQRMPRCRWGFFHVVNNDYTHWNMYAVGGSAHPTIVSQGNRYVAAPL MDPKHDAKEVTKRDHATKAEWSKWTWRSEGDLMVNGAFFVQSGVPFKKKPFSRYDMIKAK PGKFVPRLTRYSGALTCWRTSPC

Transcript Sequence

Transcript ID	VIT_01s0026g01680.t01
Transcript Infomation	cdna chromosome:12X:1:10846297:10848232:1 gene:VIT_01s0026g01680 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:D7TNE1]
Sequence	ATGGCAGCACCTAAATCCAATTCATTGCTTCTCCTGTTTGTGGTGATGTTCATGGTGGTA GTCCCAACAATACGAGCCCACATTGCGGAATACGATGACTACTGGAAAGCGCGGGAAAAG GAAGCCAAGACAGTTGCAATCGACGCATTTGATCCCAGCCCAGAGGATGTCAATGACGAT TTCAACAAGAATGTTGAGAAATCGATATTCGGAAAGAATGGCACGAGAAGGAACCTGAAA GTAAACAAGGGCCCATGCAAGGCCACAAACCCCATTGATCGATGCTGGAGATGCCGTCGC AACTGGGCGATGGATCGCAGGAGGCTAGCCGACTGCGTCCTTGGTTTTGGGCGGAGAACA GTGGGAGGAAAGCACGGGAGGTTATACATTGTGACTGATCCGTCCGACAATGACATGCTT AATCCTAAGCCTGGAACCTTACGCTACGCCGTCATCCAGCCACAGCCACTGTGGATCGTG TTTGGGCGCAGTATGATAATTAAGCTGAAACAGGAGCTGATGGTGACCAGTGACAAAACC ATTGACGGAAGGGGAGTCAATGTCCACATCGCATATGGTGCCGGCATTACGATTCAGTTC GCCAGGAATGTGATCATCCATGGCCTCCACATTCACGACATTGTTTCACGCCCAGGAGGA CTTATTAGGGATTCTGTCCATCACTTCGGCTTGAGAACCAGGAGCGATGGCGATGGAATC TCCATCTTTGGCTCATCCCACGTTTGGATTGACCATAACTCCATGTCCAAGTGCGAGGAC GGCCTGGTCGATGCCATCCAAGGATCCACCGCTATCACCATCTCCAACAACCATTTTACC AAGCACAATGAGACGATGTTGTTAGGCGCAAGTGATGGGTACTCGGGCGATATCATAATG CAAGTGACCGTGGCATTCAACCATTTCGGGAGGGGATTGATTCAAAGGATGCCAAGGTGC CGATGGGGGTTTTTCCATGTTGTGAACAACGACTACACCCACTGGAACATGTACGCTGTG GGTGGTAGTGCACATCCTACCATAGTCAGCCAGGGCAACCGATACGTCGCTGCCCCCTTA ATGGATCCAAAGCATGACGCTAAGGAGGTGACCAAGAGAGACCATGCGACGAAAGCAGAG TGGAGCAAGTGGACATGGAGATCAGAGGGAGATCTGATGGTAAATGGAGCCTTCTTTGTT CAATCGGGGGTGCCTTTTAAGAAAAAGCCTTTCTCCAGATATGATATGATCAAAGCAAAG CCAGGCAAATTTGTGCCCAGACTCACTCGCTACTCAGGCGCCCTTACTTGCTGGCGTACC TCACCCTGTTAAGTCCAAAAAGTACAGTTGAATGAAGATGCTTTCTTCTCTTTTCCATAG ATATGAAGCCAAATTACCTGTTGTTACAACAGATGATCATTATATGTAGGAGAGGAAGAG AAAGGGAATACAATACCATTACTGCTATTCTTGTTTTTGTTTCACATTTTTTCTTTTTCT TTTTTGTTTTCTTCTTCGTTATTTTGGCTTGATTGAATGGAGATTAGTATCTTCCAGACC GATGTGGGATTAAGCACAACATGTTCAGGAAATTAAACAAGCGAATTCC