Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_01s0026g01670.t01
CDS Infomation	cds chromosome:12X:1:10843187:10845074:1 gene:VIT_01s0026g01670 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:D7TNE2]
Sequence	ATGGCAGCAGTTAAATCCAGTTCCTTGCTTCTCCTTTTTTTCGTGTTATTCGCTGTTATA GCGCCAACAATACGAGCCCACATTGCAGAATATGATGATTATTGGAAGGAGCGAGAAGAG GAAGCCAAGAAAGCTGCCCTCGAAGCATTCCATCCGACACCGCAGGAAGTCAACGACCAT TTCAATCTGCATGTTGAGGATGAGCTAACGGGGAGCAATGGAACAAGGAGGAGCCTGAGA GTTAACAAGGGACCATGCAAGGCTACAAATCCTATTGATCGATGCTGGAGGTGCCGTCCA AATTGGGCTTCACAACGCAAAAGGCTAGCTGACTGTGTCCTCGGTTTTGGGCGGAACACA GTGGGAGGAAAGTATGGCAAATACTACTTCGTGACCGATCCCTCCGATAATGACATGGTG AACCCTAAGAAGGGAACATTACGCCATGCCGTGATCCAGCCAAGGCCGCTGTGGATTGTG TTTGCTCGCAGTATGATAATTAGGTTGAATCAGGAGCTGATCATGACCAGTGACAAAACC ATTGATGGAAGGGGAGTCAATGTCCATATCGCCTATGGTGCCGGCATTACAATTCAGTTC GTCAAGAATGTGATCATCCATGGCCTCCACATTCACGACATTGTTTCAGGCTCAGGAGGA CTTATTAGGGATTCTGTCAATCACTTTGGCTATAGAAGCAGAAGTGATGGTGATGGAATC TCCATTTATGGTTCATCCCACGTTTGGATTGACCATAATTCCATGTCCAATTGTAAGGAT GGACTGATCGATGCCATCCAAGGATCCACCGCCATCACCATCTCCAACAACCATTTCACC AAACACAATGAGGTGATGTTGTTCGGCGCAAGTGATAGTAACTCCGCGGATGAAATAATG CAAATCACGGTTGCATTCAACCACTTCGGAAGGGGATTGATTCAGAGGATGCCGAGGTGC CGATGGGGCTTCTTCCATGTTGTGAACAACGACTACACCCACTGGAACATGTATGCCATT GGCGGTAGTGCACATCCTACCATCATCAGCCAGGGCAACCGATACACAGCTCCTCATTTA GTGGATCCAAAACATGATGCTAAGCAGGTGACCAAGAGGGACTATGCGATGGAGTCGGAG TGGAAGAAGTGGACATGGAGATCGGAGGGAGATCTGATGAGGAATGGAGCCTTCTTCGTT CCATCTGGGAACCCCTCCAAAAGGATGCCATACTCTAGGCTGGATATGATCAAAGCAAAG CCAGGGACCTATGTTTCAAGACTCACCCGTTTCTCCGGTGCACTTACCTGCAGGCGTGGT GGACCTTGTTAA

Peptide Sequence

PEP ID	VIT_01s0026g01670.t01
PEP Infomation	pep chromosome:12X:1:10843187:10845074:1 gene:VIT_01s0026g01670 transcript:VIT_01s0026g01670.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:D7TNE2]
Sequence	MAAVKSSSLLLLFFVLFAVIAPTIRAHIAEYDDYWKEREEEAKKAALEAFHPTPQEVNDH FNLHVEDELTGSNGTRRSLRVNKGPCKATNPIDRCWRCRPNWASQRKRLADCVLGFGRNT VGGKYGKYYFVTDPSDNDMVNPKKGTLRHAVIQPRPLWIVFARSMIIRLNQELIMTSDKT IDGRGVNVHIAYGAGITIQFVKNVIIHGLHIHDIVSGSGGLIRDSVNHFGYRSRSDGDGI SIYGSSHVWIDHNSMSNCKDGLIDAIQGSTAITISNNHFTKHNEVMLFGASDSNSADEIM QITVAFNHFGRGLIQRMPRCRWGFFHVVNNDYTHWNMYAIGGSAHPTIISQGNRYTAPHL VDPKHDAKQVTKRDYAMESEWKKWTWRSEGDLMRNGAFFVPSGNPSKRMPYSRLDMIKAK PGTYVSRLTRFSGALTCRRGGPC

Transcript Sequence

Transcript ID	VIT_01s0026g01670.t01
Transcript Infomation	cdna chromosome:12X:1:10843187:10845074:1 gene:VIT_01s0026g01670 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:D7TNE2]
Sequence	ATGGCAGCAGTTAAATCCAGTTCCTTGCTTCTCCTTTTTTTCGTGTTATTCGCTGTTATA GCGCCAACAATACGAGCCCACATTGCAGAATATGATGATTATTGGAAGGAGCGAGAAGAG GAAGCCAAGAAAGCTGCCCTCGAAGCATTCCATCCGACACCGCAGGAAGTCAACGACCAT TTCAATCTGCATGTTGAGGATGAGCTAACGGGGAGCAATGGAACAAGGAGGAGCCTGAGA GTTAACAAGGGACCATGCAAGGCTACAAATCCTATTGATCGATGCTGGAGGTGCCGTCCA AATTGGGCTTCACAACGCAAAAGGCTAGCTGACTGTGTCCTCGGTTTTGGGCGGAACACA GTGGGAGGAAAGTATGGCAAATACTACTTCGTGACCGATCCCTCCGATAATGACATGGTG AACCCTAAGAAGGGAACATTACGCCATGCCGTGATCCAGCCAAGGCCGCTGTGGATTGTG TTTGCTCGCAGTATGATAATTAGGTTGAATCAGGAGCTGATCATGACCAGTGACAAAACC ATTGATGGAAGGGGAGTCAATGTCCATATCGCCTATGGTGCCGGCATTACAATTCAGTTC GTCAAGAATGTGATCATCCATGGCCTCCACATTCACGACATTGTTTCAGGCTCAGGAGGA CTTATTAGGGATTCTGTCAATCACTTTGGCTATAGAAGCAGAAGTGATGGTGATGGAATC TCCATTTATGGTTCATCCCACGTTTGGATTGACCATAATTCCATGTCCAATTGTAAGGAT GGACTGATCGATGCCATCCAAGGATCCACCGCCATCACCATCTCCAACAACCATTTCACC AAACACAATGAGGTGATGTTGTTCGGCGCAAGTGATAGTAACTCCGCGGATGAAATAATG CAAATCACGGTTGCATTCAACCACTTCGGAAGGGGATTGATTCAGAGGATGCCGAGGTGC CGATGGGGCTTCTTCCATGTTGTGAACAACGACTACACCCACTGGAACATGTATGCCATT GGCGGTAGTGCACATCCTACCATCATCAGCCAGGGCAACCGATACACAGCTCCTCATTTA GTGGATCCAAAACATGATGCTAAGCAGGTGACCAAGAGGGACTATGCGATGGAGTCGGAG TGGAAGAAGTGGACATGGAGATCGGAGGGAGATCTGATGAGGAATGGAGCCTTCTTCGTT CCATCTGGGAACCCCTCCAAAAGGATGCCATACTCTAGGCTGGATATGATCAAAGCAAAG CCAGGGACCTATGTTTCAAGACTCACCCGTTTCTCCGGTGCACTTACCTGCAGGCGTGGT GGACCTTGTTAATTCCAAGATGTCCTACTTCTCTTCTGCATTGAAAATCCTGATGTGACT ATAAATCATTATGTATTGCAGAAGAAAACAAAGACAGTGCTGCTGCTGTCTTGTTGCTAT TTGTCATCTTACACTTTGTTTAATTTGTTTCTTCCACCATATTTTTGGCTTGATAATGCA GAGAGAATTAAAAAAAAAA