Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0026g00220.t01
CDS Infomation

cds chromosome:12X:1:8860707:8865414:-1 gene:VIT_01s0026g00220 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACTATTCCTAGGATCTCATCGCTGCTCTCTCGCTCTTTCACTTCTTCTGCTTCTTCT
GCTTTGCTTTCTTCCATAGGGAGGAATTCATCCCGGAGGGGCGGGATCTTTAGATATAGC
ACTGCTGCAGTTGTTGAAGAACCAATCAATCCTTCTGTTAATGTCAATTATACTCAGCTT
TTAATCAATGGACAATTTGTGGATGCCGCAACGGGGAAAACTTTTGAGACATTGGACCCC
AGGACAGGGAATGTGATTGCCAGTGTTGCTGAAGGTGACGCAGAAGATGTTAATCGAGCT
GTCTCGGCTGCTCGCAAGGCGTTTGATGAGGGACCATGGCCTAGGATGAGTCCTTATGAG
AGATCCAAGATACTCTTGCGTTTTGCTGATTTGCTTGAAAAGCACAATGATGAGATTGCA
GCACTCGAGACTTGGGATAATGGGAAACCATTTGAACAGGCTGCAAAGGCTGAAGTACCA
TTGGTGATACGTTTGATGCGGTACTATGCGGGTTGGGCAGATAAGATTCATGGTCTCACG
GTTCCTGCTGATGGATTGCATCAAGTGCAAACCTTGCATGAACCCATTGGCGTTGCTGGA
CAGATTATCCCCTGGAATTTCCCACTTCTCATGTATGCTTGGAAGATTGGACCTGCATTA
GCATGTGGTAACACTATCGTTCTAAAGACAGCAGAGCAGACACCATTGTCTGCTTTATAT
GCATCGAAGTTATTGCATGAGGCCGGGCTTCCTCCAGGTGTTCTAAATGTGGTTTCTGGT
TATGGTCCAACTGCTGGTGCAGCACTTGCCAGCCATATGGATGTGGACAAGCTTGCTTTC
ACTGGATCAACTGCAACTGGAAAAATTGTACTTCAATTGGCTGCAAGGAGCAATCTTAAG
CCAGTGACTTTAGAGCTTGGAGGGAAATCCCCTTTCATTGTGTGTGAGGATGCTAATGTA
GATGAGGCTGTTGAGCTAGCCCACTTTGCTTTATTCTTTAATCAGGGGCAATGTTGTTGT
GCTGGCTCCCGTACATTTGTACATGAAAGTATATACGATGAGTTTGTAGAGAAGGCGAAA
GCACGTGCTTTAAGACGCACCGTTGGTGATCCATTCAAGGCAGGCATTGAGCAAGGCCCC
CAGATTGATTCAGATCAATTTGAGAAGATCCTGAGATACATAAGATCTGGTGTCGAAAAT
GGAGCCACCCTTGAAACCGGAGGTGAGAGATTTGGCAAAGAGGGCTTCTTCATTAAGCCT
ACAGTTTTCTCTAATGTTCAGGACGGCATGTTGATAGCACAGGACGAGATATTTGGACCA
GTGCAGTCCATCCTGAAATTCAAGGACCTTGGTGAGGTGATAAGAAGGGCAAACGCCACT
AGTTATGGGCTGGCCGCAGGAGTCTTTACCCAGAACTTAGACACAGCCAACACCTTGACC
CGCGCACTAAAGGTGGGCACAGTATGGATTAACTGCTTTGATGTGTTTGATGCAGCGATT
CCTTTTGGTGGGTACAAGATGAGTGGGCATGGCAGAGAAAAGGGTATTTACAGTCTTCAA
AACTACCTGCAAGTGAAGGCTGTTATTACTCCCTTGAAGAACCCCGCGTGTCAGGTGGCC
CGTATAAGACAATCATGA

Peptide Sequence

PEP ID

VIT_01s0026g00220.t01
PEP Infomation

pep chromosome:12X:1:8860707:8865414:-1 gene:VIT_01s0026g00220 transcript:VIT_01s0026g00220.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTIPRISSLLSRSFTSSASSALLSSIGRNSSRRGGIFRYSTAAVVEEPINPSVNVNYTQL
LINGQFVDAATGKTFETLDPRTGNVIASVAEGDAEDVNRAVSAARKAFDEGPWPRMSPYE
RSKILLRFADLLEKHNDEIAALETWDNGKPFEQAAKAEVPLVIRLMRYYAGWADKIHGLT
VPADGLHQVQTLHEPIGVAGQIIPWNFPLLMYAWKIGPALACGNTIVLKTAEQTPLSALY
ASKLLHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLAFTGSTATGKIVLQLAARSNLK
PVTLELGGKSPFIVCEDANVDEAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAK
ARALRRTVGDPFKAGIEQGPQIDSDQFEKILRYIRSGVENGATLETGGERFGKEGFFIKP
TVFSNVQDGMLIAQDEIFGPVQSILKFKDLGEVIRRANATSYGLAAGVFTQNLDTANTLT
RALKVGTVWINCFDVFDAAIPFGGYKMSGHGREKGIYSLQNYLQVKAVITPLKNPACQVA
RIRQS

Transcript Sequence

Transcript ID

VIT_01s0026g00220.t01
Transcript Infomation

cdna chromosome:12X:1:8860707:8865414:-1 gene:VIT_01s0026g00220 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAGAAGAATTGTTTGCAGTGATGACTATTCCTAGGATCTCATCGCTGCTCTCTCGCTCT
TTCACTTCTTCTGCTTCTTCTGCTTTGCTTTCTTCCATAGGGAGGAATTCATCCCGGAGG
GGCGGGATCTTTAGATATAGCACTGCTGCAGTTGTTGAAGAACCAATCAATCCTTCTGTT
AATGTCAATTATACTCAGCTTTTAATCAATGGACAATTTGTGGATGCCGCAACGGGGAAA
ACTTTTGAGACATTGGACCCCAGGACAGGGAATGTGATTGCCAGTGTTGCTGAAGGTGAC
GCAGAAGATGTTAATCGAGCTGTCTCGGCTGCTCGCAAGGCGTTTGATGAGGGACCATGG
CCTAGGATGAGTCCTTATGAGAGATCCAAGATACTCTTGCGTTTTGCTGATTTGCTTGAA
AAGCACAATGATGAGATTGCAGCACTCGAGACTTGGGATAATGGGAAACCATTTGAACAG
GCTGCAAAGGCTGAAGTACCATTGGTGATACGTTTGATGCGGTACTATGCGGGTTGGGCA
GATAAGATTCATGGTCTCACGGTTCCTGCTGATGGATTGCATCAAGTGCAAACCTTGCAT
GAACCCATTGGCGTTGCTGGACAGATTATCCCCTGGAATTTCCCACTTCTCATGTATGCT
TGGAAGATTGGACCTGCATTAGCATGTGGTAACACTATCGTTCTAAAGACAGCAGAGCAG
ACACCATTGTCTGCTTTATATGCATCGAAGTTATTGCATGAGGCCGGGCTTCCTCCAGGT
GTTCTAAATGTGGTTTCTGGTTATGGTCCAACTGCTGGTGCAGCACTTGCCAGCCATATG
GATGTGGACAAGCTTGCTTTCACTGGATCAACTGCAACTGGAAAAATTGTACTTCAATTG
GCTGCAAGGAGCAATCTTAAGCCAGTGACTTTAGAGCTTGGAGGGAAATCCCCTTTCATT
GTGTGTGAGGATGCTAATGTAGATGAGGCTGTTGAGCTAGCCCACTTTGCTTTATTCTTT
AATCAGGGGCAATGTTGTTGTGCTGGCTCCCGTACATTTGTACATGAAAGTATATACGAT
GAGTTTGTAGAGAAGGCGAAAGCACGTGCTTTAAGACGCACCGTTGGTGATCCATTCAAG
GCAGGCATTGAGCAAGGCCCCCAGATTGATTCAGATCAATTTGAGAAGATCCTGAGATAC
ATAAGATCTGGTGTCGAAAATGGAGCCACCCTTGAAACCGGAGGTGAGAGATTTGGCAAA
GAGGGCTTCTTCATTAAGCCTACAGTTTTCTCTAATGTTCAGGACGGCATGTTGATAGCA
CAGGACGAGATATTTGGACCAGTGCAGTCCATCCTGAAATTCAAGGACCTTGGTGAGGTG
ATAAGAAGGGCAAACGCCACTAGTTATGGGCTGGCCGCAGGAGTCTTTACCCAGAACTTA
GACACAGCCAACACCTTGACCCGCGCACTAAAGGTGGGCACAGTATGGATTAACTGCTTT
GATGTGTTTGATGCAGCGATTCCTTTTGGTGGGTACAAGATGAGTGGGCATGGCAGAGAA
AAGGGTATTTACAGTCTTCAAAACTACCTGCAAGTGAAGGCTGTTATTACTCCCTTGAAG
AACCCCGCGTGTCAGGTGGCCCGTATAAGACAATCATGA