Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_01s0026g00190.t01
CDS Infomation	cds chromosome:12X:1:8823958:8826187:-1 gene:VIT_01s0026g00190 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:D7TNR3]
Sequence	ATGACTCACAAAATTCACGCCTCCCCTCGCCGGATACTCACATTTCCGGCGGTTCATCCC TGCGATGCCGTTGCCCCGGCGACGCTTCTCGCCTCTCTGGTCAATCTTGCTACCACCATT TGCGGATACAAGTCCAAATTCTTTGCTGCCAATAAGCGGAACACACGAGAATTGATTCGC CAAATAGGAATTCTTCTGGTTTTCTTGGAGGAAATCCTGGACCGGCGGCTGGATCTTCCG GCGTCGGCTGTTCTCAGCTTCTCGGAGCTCCATGTGACGCTCCAGAAGATCGTGTACTTG TTGGAAGATTGCTCGTTCGGTGGTGCCCGGTTGTTGATGCTGATGAAATCGGAGAGGGTT TCGAATCATCTTAGGATTTTGATTAGGGCTACTGCGACCGCTCTAGATGTGCTTCCTTTG GAGTTGATCGATGTGTCTGATGAAGTTAAAGAATCGGTTGAGTTGACGATGAGGCAAGCA CGGAGGGTGAGATTCGAGGTTGAAGCCGATGATGAACGGGCTTCTAAGGATGTTCTTTTG ATATTGGACGGATTCGAAGATGGAGTTGTTCCTGATAGAGGTGATATCAGAAGAGTTCTT GATTATGTTGGGATTCGAAGTTGGAGTGAGTGTAACAAGGAGGTTAAGTTCTTGGATACA GAGCTTGGGTTAGAGTGGTCGAATATGGAAAAGAGGGAGGTTGCTTTTCTTAGCAGTCTA ATGGGGTTTATGAGCTACTGTCGCTTTGCATTGTTCGATGTTGTGGATGGCGAAGCCGGG CAACAATTGGATAAGGAATGCAGCAGTGACGTGCTTAATTGCCTTAACCCCGATGATTTT CGATGTCCTATCACTCTTGAGTTGATGACTGATCCAGTGACGATAGAGACAGGGCATACC TACGAGCGATCTTCCATTCTGAAATGGTTCAGAGCAGGAAATCCCATCTGTCCCAAGACA GGTGAGAAGGTTGTGAGCATGGATGTAGTCCCCAATATGGCTCTCCAGAGGCTTATCCAG CAGTACTGTTCTGCTAATGGTATTCCAATTTCTGAGCCGGGTCATAGGAATCATGATATT ACAAGGACGGTTCTAGCGGGTAGTTTAGCAGCTGAGGGAGCCATGAAAGTGATGGCCAAT TTTCTTGCTGGCAGGCTTGCGGCTGGAACTAGTGGAGAGAGGAATAAAGCTGCTTACGAA ATTCGTTTACTTGCTAAAACAAACATTTTCAATAGGTACTGCTTGGCGGAAGCAGGGACA ATCCCACGTCTATTGCATCTGCTTTCTTCTGGAGATTCATCCAGTCAACATAATGCCATT GCAGCCCTCTTAAACCTTTCAAAGTATTCGAAAAGCAAAACAATCATGGCTGAGAATGGG GGCTTGGAATTGATTGTAGGTGTTCTAAGGAAGGGACTAAAGATAGAGGTTCGAGAGCTT GCAGCTGCTACACTATATTACCTTGCTTCAGTGGAGGAGTACAGGAAATTAATTGGGGAA ATTCCAGAGGCTTTTCCAGCTCTGCTGGAGCTCATCAAAACCAGGACCGATCGGGGCAAG AAGAATGCATTGGTTGCTATCTTTGGGCTCCTTACGTTCCCTGACAACCATTGGAGGGTG CTTGCATCAGGAGCAGTCCCCTTACTGGTCAATCTTTTGACATCTTCTGAGAGGGAAGAT CTGGTAACGGCTTCTCTAGCAGTTCTAGCAACTCTAGCAGAGAAACTAGATGGAACAATT ACAATCCTAGGAACGGGAGCTTTACATCTCATCTTGCAGATTCTAAATTCGTCCCCTTCA AGGCCAGGGATAGAGTATTGTGTTTCACTGTTGTTGGCTCTGTGCATCAATGGTGGGAAA GAAGTGGTTTCTGTTTTAGTAAAAAACCCTTCTCTCATGGGATCATTATATTCCCTTCTC ACCGAAGACAACTCCCGAGCAAGTAAGAAGGCCAGGTCGCTCATCAGGATCCTCCATGAA TTCTGTGAAAGACGTGCCTCTGGCTTGGTGACTCCAGCATTTCCAGAAGAAAGATATGTT GACGTATGGTAA

Peptide Sequence

PEP ID	VIT_01s0026g00190.t01
PEP Infomation	pep chromosome:12X:1:8823958:8826187:-1 gene:VIT_01s0026g00190 transcript:VIT_01s0026g00190.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:D7TNR3]
Sequence	MTHKIHASPRRILTFPAVHPCDAVAPATLLASLVNLATTICGYKSKFFAANKRNTRELIR QIGILLVFLEEILDRRLDLPASAVLSFSELHVTLQKIVYLLEDCSFGGARLLMLMKSERV SNHLRILIRATATALDVLPLELIDVSDEVKESVELTMRQARRVRFEVEADDERASKDVLL ILDGFEDGVVPDRGDIRRVLDYVGIRSWSECNKEVKFLDTELGLEWSNMEKREVAFLSSL MGFMSYCRFALFDVVDGEAGQQLDKECSSDVLNCLNPDDFRCPITLELMTDPVTIETGHT YERSSILKWFRAGNPICPKTGEKVVSMDVVPNMALQRLIQQYCSANGIPISEPGHRNHDI TRTVLAGSLAAEGAMKVMANFLAGRLAAGTSGERNKAAYEIRLLAKTNIFNRYCLAEAGT IPRLLHLLSSGDSSSQHNAIAALLNLSKYSKSKTIMAENGGLELIVGVLRKGLKIEVREL AAATLYYLASVEEYRKLIGEIPEAFPALLELIKTRTDRGKKNALVAIFGLLTFPDNHWRV LASGAVPLLVNLLTSSEREDLVTASLAVLATLAEKLDGTITILGTGALHLILQILNSSPS RPGIEYCVSLLLALCINGGKEVVSVLVKNPSLMGSLYSLLTEDNSRASKKARSLIRILHE FCERRASGLVTPAFPEERYVDVW

Transcript Sequence

Transcript ID	VIT_01s0026g00190.t01
Transcript Infomation	cdna chromosome:12X:1:8823958:8826187:-1 gene:VIT_01s0026g00190 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:D7TNR3]
Sequence	ATGACTCACAAAATTCACGCCTCCCCTCGCCGGATACTCACATTTCCGGCGGTTCATCCC TGCGATGCCGTTGCCCCGGCGACGCTTCTCGCCTCTCTGGTCAATCTTGCTACCACCATT TGCGGATACAAGTCCAAATTCTTTGCTGCCAATAAGCGGAACACACGAGAATTGATTCGC CAAATAGGAATTCTTCTGGTTTTCTTGGAGGAAATCCTGGACCGGCGGCTGGATCTTCCG GCGTCGGCTGTTCTCAGCTTCTCGGAGCTCCATGTGACGCTCCAGAAGATCGTGTACTTG TTGGAAGATTGCTCGTTCGGTGGTGCCCGGTTGTTGATGCTGATGAAATCGGAGAGGGTT TCGAATCATCTTAGGATTTTGATTAGGGCTACTGCGACCGCTCTAGATGTGCTTCCTTTG GAGTTGATCGATGTGTCTGATGAAGTTAAAGAATCGGTTGAGTTGACGATGAGGCAAGCA CGGAGGGTGAGATTCGAGGTTGAAGCCGATGATGAACGGGCTTCTAAGGATGTTCTTTTG ATATTGGACGGATTCGAAGATGGAGTTGTTCCTGATAGAGGTGATATCAGAAGAGTTCTT GATTATGTTGGGATTCGAAGTTGGAGTGAGTGTAACAAGGAGGTTAAGTTCTTGGATACA GAGCTTGGGTTAGAGTGGTCGAATATGGAAAAGAGGGAGGTTGCTTTTCTTAGCAGTCTA ATGGGGTTTATGAGCTACTGTCGCTTTGCATTGTTCGATGTTGTGGATGGCGAAGCCGGG CAACAATTGGATAAGGAATGCAGCAGTGACGTGCTTAATTGCCTTAACCCCGATGATTTT CGATGTCCTATCACTCTTGAGTTGATGACTGATCCAGTGACGATAGAGACAGGGCATACC TACGAGCGATCTTCCATTCTGAAATGGTTCAGAGCAGGAAATCCCATCTGTCCCAAGACA GGTGAGAAGGTTGTGAGCATGGATGTAGTCCCCAATATGGCTCTCCAGAGGCTTATCCAG CAGTACTGTTCTGCTAATGGTATTCCAATTTCTGAGCCGGGTCATAGGAATCATGATATT ACAAGGACGGTTCTAGCGGGTAGTTTAGCAGCTGAGGGAGCCATGAAAGTGATGGCCAAT TTTCTTGCTGGCAGGCTTGCGGCTGGAACTAGTGGAGAGAGGAATAAAGCTGCTTACGAA ATTCGTTTACTTGCTAAAACAAACATTTTCAATAGGTACTGCTTGGCGGAAGCAGGGACA ATCCCACGTCTATTGCATCTGCTTTCTTCTGGAGATTCATCCAGTCAACATAATGCCATT GCAGCCCTCTTAAACCTTTCAAAGTATTCGAAAAGCAAAACAATCATGGCTGAGAATGGG GGCTTGGAATTGATTGTAGGTGTTCTAAGGAAGGGACTAAAGATAGAGGTTCGAGAGCTT GCAGCTGCTACACTATATTACCTTGCTTCAGTGGAGGAGTACAGGAAATTAATTGGGGAA ATTCCAGAGGCTTTTCCAGCTCTGCTGGAGCTCATCAAAACCAGGACCGATCGGGGCAAG AAGAATGCATTGGTTGCTATCTTTGGGCTCCTTACGTTCCCTGACAACCATTGGAGGGTG CTTGCATCAGGAGCAGTCCCCTTACTGGTCAATCTTTTGACATCTTCTGAGAGGGAAGAT CTGGTAACGGCTTCTCTAGCAGTTCTAGCAACTCTAGCAGAGAAACTAGATGGAACAATT ACAATCCTAGGAACGGGAGCTTTACATCTCATCTTGCAGATTCTAAATTCGTCCCCTTCA AGGCCAGGGATAGAGTATTGTGTTTCACTGTTGTTGGCTCTGTGCATCAATGGTGGGAAA GAAGTGGTTTCTGTTTTAGTAAAAAACCCTTCTCTCATGGGATCATTATATTCCCTTCTC ACCGAAGACAACTCCCGAGCAAGTAAGAAGGCCAGGTCGCTCATCAGGATCCTCCATGAA TTCTGTGAAAGACGTGCCTCTGGCTTGGTGACTCCAGCATTTCCAGAAGAAAGATATGTT GACGTATGGTAACAAAAAAAGTTCCAATTATTTTAATCTTTTATTCTTTTCAAGCATCTT TCCTTGTAAATACACACGAGTATGGAGATGCTCGCTTGTCTTTTTTCCCAGATTGATTTC ATGATATTAGCTCGTTTTTTTCAAGAGCTAATTACTAAATCAGCTTCTGCTTTTTAATGA AGCTTTGTAC