Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0026g00040.t01
CDS Infomation

cds chromosome:12X:1:8670265:8675104:1 gene:VIT_01s0026g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATCTTCTTGCCAAGAGTTACACGGCAGATGATGACGACGGGCCACAGCATGAAGCA
GAAGACCAAAACCTTGACAATTCATCGCCGGATTCTTCCCCAACTCGAATCGCTCTCCCC
TCCAAATCCTCCGCCCCCAAGGTCGACGACACCACGCTCGCTCTCGCGATCGCCAATACA
AATGACAAACCCATTGACCCTATCCAACACGTCGTCCCCTTCAATCCCACCTACGACCAG
CTCTGGGCTCCCATCTATGGCCCCGCCCACCCATACGCCAAAGACGGCATCGCTCAAGGC
ATGCGCAACCACAAGCTAGGGTTCGTGGAAAACGCCGCTATCGAGCCTTTCATTTTCGAC
GAACAATATAACACGTTTCACAAGTACGGTTACGCCGCGGACCCGTCTGCTTCGGCGGGG
AATAATTATGTTGGGGATCTGGAGGCGTTGGAGAAAAACGACGGTATTTCAGTGTATAAT
ATTCCTCAGCACGAGCAAAAGAAGCGGAAGATTGAGAAAAAGAAGGAATCGGAGAGCGAG
GAGAATGAGGATGTTGATGTGGAGGAGGTTCAGAATCCCGCTACTGATACGTGGTTGTTG
AAAAATAAGAAGAGTCCGTGGGCGGGGAAGAAGGAAGGGTTGCAGACGGAATTGACGGAG
GAACAGAAGAAGTACGCCGAGGAGTACGCAAAGAAGAAGGGTGAGGAGAAAGGGGCAGCC
GAAAAGGGCGAATTTGTTACAGATAAGAGTACATTTCATGGGAAAGAGGAGAGGGATTAT
CAGGGTAGGTCTTGGATTGCACCACCCAAGGATGCTAAGGCTACAAACGATCATTGTTAT
ATACCAAAGAGATTGGTGCATACTTGGAGTGGACACACGAAGGGTGTGTCTGCAATTCGG
TTCTTCCCCAAGCATGGGCATTTGATTCTCTCAGCTGGGATGGATACCAAGGTAAAGATT
TGGGATGTGTTCAATTCAGGGAAGTGTATGAGGACTTATATGGGTCACTCAAAGGCAGTT
CGAGATATTTCGTTTTGTAATGATGGGACTAAGTTTTTGACTGCTGGGTATGACAAGAAT
ATCAAGTACTGGGACACAGAAACTGGACAGGTGATATCCACCTTCTCAACTGGGAAGATC
CCTTATGTTGTTAAGCTGAATCCAGATGATGATAAGCAGAATATCCTATTAGCAGGGATG
AGTGATAAAAAGATTGTTCAGTGGGATATGAATACAGGGCAAATTACACAAGAGTATGAT
CAACATTTGGGAGCGGTAAACACCATTACATTTGTAGACAACAATAGGAGATTCGTCACT
TCTAGTGATGACAAATCTCTTCGTGTTTGGGAATTTGGGATTCCTGTGGTTATAAAGTAT
ATCAGTGAACCTCATATGCACTCCATGCCATCAATTTCTCTTCACCCAAATACAAATTGG
CTTGCGGCACAGAGTTTGGACAATCAGATTCTTATTTATAGCACTAGGGAGAGGTTTCAG
CTCAATAAAAAGAAGAGGTTTGCTGGTCACATTGCGGCTGGCTATGCTTGCCAAGTCAAT
TTCTCACCAGATGGACGGTTTGTCATGTCTGGAGATGGTGAAGGTAAATGCTGGTTTTGG
GACTGGAAGAGTTGCAAAGTCTTCAGAACACTCAAGTGTCATGAAGGGGTATGCATCGGG
TGTGAGTGGCATCCTTTGGAACAAAGTAAAGTAGCAACATGTGGCTGGGATGGCTTGATT
AAGTACTGGGACTAA

Peptide Sequence

PEP ID

VIT_01s0026g00040.t01
PEP Infomation

pep chromosome:12X:1:8670265:8675104:1 gene:VIT_01s0026g00040 transcript:VIT_01s0026g00040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDLLAKSYTADDDDGPQHEAEDQNLDNSSPDSSPTRIALPSKSSAPKVDDTTLALAIANT
NDKPIDPIQHVVPFNPTYDQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVENAAIEPFIFD
EQYNTFHKYGYAADPSASAGNNYVGDLEALEKNDGISVYNIPQHEQKKRKIEKKKESESE
ENEDVDVEEVQNPATDTWLLKNKKSPWAGKKEGLQTELTEEQKKYAEEYAKKKGEEKGAA
EKGEFVTDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIR
FFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTAGYDKN
IKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYD
QHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNW
LAAQSLDNQILIYSTRERFQLNKKKRFAGHIAAGYACQVNFSPDGRFVMSGDGEGKCWFW
DWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD

Transcript Sequence

Transcript ID

VIT_01s0026g00040.t01
Transcript Infomation

cdna chromosome:12X:1:8670265:8675104:1 gene:VIT_01s0026g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACGGAGAAGCCATGGATCTTCTTGCCAAGAGTTACACGGCAGATGATGACGACGGGCCAC
AGCATGAAGCAGAAGACCAAAACCTTGACAATTCATCGCCGGATTCTTCCCCAACTCGAA
TCGCTCTCCCCTCCAAATCCTCCGCCCCCAAGGTCGACGACACCACGCTCGCTCTCGCGA
TCGCCAATACAAATGACAAACCCATTGACCCTATCCAACACGTCGTCCCCTTCAATCCCA
CCTACGACCAGCTCTGGGCTCCCATCTATGGCCCCGCCCACCCATACGCCAAAGACGGCA
TCGCTCAAGGCATGCGCAACCACAAGCTAGGGTTCGTGGAAAACGCCGCTATCGAGCCTT
TCATTTTCGACGAACAATATAACACGTTTCACAAGTACGGTTACGCCGCGGACCCGTCTG
CTTCGGCGGGGAATAATTATGTTGGGGATCTGGAGGCGTTGGAGAAAAACGACGGTATTT
CAGTGTATAATATTCCTCAGCACGAGCAAAAGAAGCGGAAGATTGAGAAAAAGAAGGAAT
CGGAGAGCGAGGAGAATGAGGATGTTGATGTGGAGGAGGTTCAGAATCCCGCTACTGATA
CGTGGTTGTTGAAAAATAAGAAGAGTCCGTGGGCGGGGAAGAAGGAAGGGTTGCAGACGG
AATTGACGGAGGAACAGAAGAAGTACGCCGAGGAGTACGCAAAGAAGAAGGGTGAGGAGA
AAGGGGCAGCCGAAAAGGGCGAATTTGTTACAGATAAGAGTACATTTCATGGGAAAGAGG
AGAGGGATTATCAGGGTAGGTCTTGGATTGCACCACCCAAGGATGCTAAGGCTACAAACG
ATCATTGTTATATACCAAAGAGATTGGTGCATACTTGGAGTGGACACACGAAGGGTGTGT
CTGCAATTCGGTTCTTCCCCAAGCATGGGCATTTGATTCTCTCAGCTGGGATGGATACCA
AGGTAAAGATTTGGGATGTGTTCAATTCAGGGAAGTGTATGAGGACTTATATGGGTCACT
CAAAGGCAGTTCGAGATATTTCGTTTTGTAATGATGGGACTAAGTTTTTGACTGCTGGGT
ATGACAAGAATATCAAGTACTGGGACACAGAAACTGGACAGGTGATATCCACCTTCTCAA
CTGGGAAGATCCCTTATGTTGTTAAGCTGAATCCAGATGATGATAAGCAGAATATCCTAT
TAGCAGGGATGAGTGATAAAAAGATTGTTCAGTGGGATATGAATACAGGGCAAATTACAC
AAGAGTATGATCAACATTTGGGAGCGGTAAACACCATTACATTTGTAGACAACAATAGGA
GATTCGTCACTTCTAGTGATGACAAATCTCTTCGTGTTTGGGAATTTGGGATTCCTGTGG
TTATAAAGTATATCAGTGAACCTCATATGCACTCCATGCCATCAATTTCTCTTCACCCAA
ATACAAATTGGCTTGCGGCACAGAGTTTGGACAATCAGATTCTTATTTATAGCACTAGGG
AGAGGTTTCAGCTCAATAAAAAGAAGAGGTTTGCTGGTCACATTGCGGCTGGCTATGCTT
GCCAAGTCAATTTCTCACCAGATGGACGGTTTGTCATGTCTGGAGATGGTGAAGGTAAAT
GCTGGTTTTGGGACTGGAAGAGTTGCAAAGTCTTCAGAACACTCAAGTGTCATGAAGGGG
TATGCATCGGGTGTGAGTGGCATCCTTTGGAACAAAGTAAAGTAGCAACATGTGGCTGGG
ATGGCTTGATTAAGTACTGGGACTAAACCCATTTCTGCTATATACTGCAAGGTGGTGCTA
TCAGTTGATCAACACCGACACATTCAGTGAGAGGACCAGAGCAGCCTGTTTGTGCACTTG
AACTTATATTGTGAATGGGGTTTCTTTGCTAAAACTAAGCGCAGTCACCACATTCAGATT
CAGAAACAGAATGTAAAATATCTCCATGTTGGCTGGGCTCACCTGACATCTGCGAGTTCA
TTTCATTCTTCA