Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g06630.t01
CDS Infomation

cds chromosome:12X:1:6459163:6466636:1 gene:VIT_01s0011g06630 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit I [Source:UniProtKB/TrEMBL;Acc:A5AL04]
Sequence

ATGAGGCCTATTCTGATGAAAGGCCATGAAAGGCCATTAACGTTTCTAAAGTACAACAGA
GATGGAGATCTACTCTTCTCTTGTGCCAAGGATCACACTCCCACCGTCTGGTTCGCCGAC
AACGGGGAGCGCCTCGGCACCTATCGTGGACACAACGGTGCCGTTTGGACCTGCGATGTC
TCCAGGGATTCGATGCGGCTGATCACTGGAAGTGCAGACCAGACGGTGAAGCTATGGAAC
GTAGAAACAGGGGCGCAGCTTTTTACCTTCAATTTTGATTCTCCGGCTAGGTCTGTGGAC
TTTTCTGTTGGGGATAAGTTAGCTGTGATTACCACCGATCCTTTCATGGAATTGACTTCT
GCAATTCATGTCAAACGCATTGCTCGCGATCCCTCACAGCAGACGGCTGAGTCTGCGCTT
GTCATCAAGGGCCCTCAAGGAAGGATAAACAGAGCTATTTGGGGACCCTTAAACAGGACT
ATCATAAGTGCTGGTGAAGATGCCATTGTTCGTATATGGGATTCTGAGACGGGGAAACTG
CTTAAAGAGTCAGACAAGGAAACCGGCCACAAAAAGACAGTAACATCACTTTCAAAAGCT
GTAGATGGTTCACATTTTGTTACTGGCTCCCTGGATAAATCTGCTAAGCTTTGGGACAGC
AGGACGTTAACACTTATCAAGACCTATCTAACAGAACGCCCGGTCAATGCAGTTACAATG
TCTCCACTTCTTGATCATGTAGTACTAGGAGGTGGTCAAGATGCATCACATGTCACAACA
ACTGATCATCGTGCTGGAAAGTTTGAGGCAAAATTCTATGATAAGATTCTTCAAGAAGAA
ATTGGAGGTGTGAAAGGGCACTTTGGACCTATAAATGCTTTAGCATTCAACCCTGATGGA
AAGAGTTTCTCAAGTGGCGGTGAGGATGGATACGTAAGACTACATCATTTCGACCCAGAT
TACTTCAATGTCAAAATTTAG

Peptide Sequence

PEP ID

VIT_01s0011g06630.t01
PEP Infomation

pep chromosome:12X:1:6459163:6466636:1 gene:VIT_01s0011g06630 transcript:VIT_01s0011g06630.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit I [Source:UniProtKB/TrEMBL;Acc:A5AL04]
Sequence

MRPILMKGHERPLTFLKYNRDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWTCDV
SRDSMRLITGSADQTVKLWNVETGAQLFTFNFDSPARSVDFSVGDKLAVITTDPFMELTS
AIHVKRIARDPSQQTAESALVIKGPQGRINRAIWGPLNRTIISAGEDAIVRIWDSETGKL
LKESDKETGHKKTVTSLSKAVDGSHFVTGSLDKSAKLWDSRTLTLIKTYLTERPVNAVTM
SPLLDHVVLGGGQDASHVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNPDG
KSFSSGGEDGYVRLHHFDPDYFNVKI

Transcript Sequence

Transcript ID

VIT_01s0011g06630.t01
Transcript Infomation

cdna chromosome:12X:1:6459163:6466636:1 gene:VIT_01s0011g06630 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit I [Source:UniProtKB/TrEMBL;Acc:A5AL04]
Sequence

TTCTCTGAATAAATTTGAGTGACAGTCCAAAGGAGGAGGAGGAGGAGGAAGAAGAAGCAG
CGGGAGCCATGAGGCCTATTCTGATGAAAGGCCATGAAAGGCCATTAACGTTTCTAAAGT
ACAACAGAGATGGAGATCTACTCTTCTCTTGTGCCAAGGATCACACTCCCACCGTCTGGT
TCGCCGACAACGGGGAGCGCCTCGGCACCTATCGTGGACACAACGGTGCCGTTTGGACCT
GCGATGTCTCCAGGGATTCGATGCGGCTGATCACTGGAAGTGCAGACCAGACGGTGAAGC
TATGGAACGTAGAAACAGGGGCGCAGCTTTTTACCTTCAATTTTGATTCTCCGGCTAGGT
CTGTGGACTTTTCTGTTGGGGATAAGTTAGCTGTGATTACCACCGATCCTTTCATGGAAT
TGACTTCTGCAATTCATGTCAAACGCATTGCTCGCGATCCCTCACAGCAGACGGCTGAGT
CTGCGCTTGTCATCAAGGGCCCTCAAGGAAGGATAAACAGAGCTATTTGGGGACCCTTAA
ACAGGACTATCATAAGTGCTGGTGAAGATGCCATTGTTCGTATATGGGATTCTGAGACGG
GGAAACTGCTTAAAGAGTCAGACAAGGAAACCGGCCACAAAAAGACAGTAACATCACTTT
CAAAAGCTGTAGATGGTTCACATTTTGTTACTGGCTCCCTGGATAAATCTGCTAAGCTTT
GGGACAGCAGGACGTTAACACTTATCAAGACCTATCTAACAGAACGCCCGGTCAATGCAG
TTACAATGTCTCCACTTCTTGATCATGTAGTACTAGGAGGTGGTCAAGATGCATCACATG
TCACAACAACTGATCATCGTGCTGGAAAGTTTGAGGCAAAATTCTATGATAAGATTCTTC
AAGAAGAAATTGGAGGTGTGAAAGGGCACTTTGGACCTATAAATGCTTTAGCATTCAACC
CTGATGGAAAGAGTTTCTCAAGTGGCGGTGAGGATGGATACGTAAGACTACATCATTTCG
ACCCAGATTACTTCAATGTCAAAATTTAGATCCAGAGCAAATAGCAAGCGAGCTTTTCCT
TTCCTTGGACTTACCATTGTAACAGGCATTTTCTTCAACAAGATTTTGCATTTTCTCGTC
CGAGCATCAAAGTTTTGTGTTAGATTCAATTCTGACGCCAGTTAAACTGGAACAATTTAA
ATTGTTTTTCTTTGACATTTACCCTCTTGAGGGAAGTTTAGTTTTGC