Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g06430.t01
CDS Infomation

cds chromosome:12X:1:6241003:6248273:-1 gene:VIT_01s0011g06430 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTGATAGTGAATAATCCCAATGATAATAGTTTGTTATCGACATTGGAATTAAGTAGA
TCAAAGAAAATGGCTGATATTGCCGGCAAGCCGGTGGGCTCAGGCCATGCTAGAATTCCA
CTCTTGGGTTTTGGAACTGCTGTATTTCCTTTCACTGCATCAGAAACCATGAAAGAATCC
ATTCTCCATGCCATCAAACTGGGCTACAGACACATCGACGCCGCTGCTATTTACAACTCG
GAGCCTCCCGTGGGTGAAGCGATTGCGGAAGCTTTAGGCCTTGGCCTGATCAAATCAAGG
GCGGAGCTATTCATCACGTCAAAGCTTTGGTGCACCGACGCACACCCTGACCTAGTCCTC
CCTGCACTACGCAGAACTCTCAAGAATCTTGGGTTGGAATACCTTGATCTGTACCTCATA
CATTTCCCGGTGAGCTTGAAGCCTGGGAGTTGTGAGGTGCCCTTTGAAGAGAAGGATCTT
CTTCCTCTGGATTTCAAGTCTGTTTGGGAAGCCATGGAGGAGTGTCAAAGCCTCGGTCTA
TCAAAATTGATAGGAGTAAGCAACTTTTCTTGCAAGAAGCTGCAGGACCTGCTGGTCACT
GCAAAGATTTCACCCGCTGTCAATCAAGTGGAGATGAATCCACTATGGCAGCAGAAGAAG
CTGAGGGAGTTCTGTAATGGCAAGGGCATCCATGTCACAGCCTACTCCCCATTAGGTGGC
AGAGGAACTCTTTGGGGAACTAACCGAGTCCTTGACTGTAAGGTGCTGCAAGAGATTGCT
CAGGCGAAAGGAAAGACAGTAGCTCAGATATGTTTGAGGTGGGCTTTGGAGCAAGATGTG
AGTATTCTGGTGAAGAGCTTCAACAAGGAGAGGATAGAAGAGAACCTTGAGATATTGGAT
TGGAAGTTGAGCCCGGAAGAGTCCCAAAAGATCGATGATATTGAACAGCAAAGAGGGTTT
CTTGCACCTATGTTCGTATCAGAACATGGTCCTTACAAATCCCTCGAGGACTTCTGGGAC
GGAGAACTTTAG

Peptide Sequence

PEP ID

VIT_01s0011g06430.t01
PEP Infomation

pep chromosome:12X:1:6241003:6248273:-1 gene:VIT_01s0011g06430 transcript:VIT_01s0011g06430.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLIVNNPNDNSLLSTLELSRSKKMADIAGKPVGSGHARIPLLGFGTAVFPFTASETMKES
ILHAIKLGYRHIDAAAIYNSEPPVGEAIAEALGLGLIKSRAELFITSKLWCTDAHPDLVL
PALRRTLKNLGLEYLDLYLIHFPVSLKPGSCEVPFEEKDLLPLDFKSVWEAMEECQSLGL
SKLIGVSNFSCKKLQDLLVTAKISPAVNQVEMNPLWQQKKLREFCNGKGIHVTAYSPLGG
RGTLWGTNRVLDCKVLQEIAQAKGKTVAQICLRWALEQDVSILVKSFNKERIEENLEILD
WKLSPEESQKIDDIEQQRGFLAPMFVSEHGPYKSLEDFWDGEL

Transcript Sequence

Transcript ID

VIT_01s0011g06430.t01
Transcript Infomation

cdna chromosome:12X:1:6241003:6248273:-1 gene:VIT_01s0011g06430 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTGATAGTGAATAATCCCAATGATAATAGTTTGTTATCGACATTGGAATTAAGTAGA
TCAAAGAAAATGGCTGATATTGCCGGCAAGCCGGTGGGCTCAGGCCATGCTAGAATTCCA
CTCTTGGGTTTTGGAACTGCTGTATTTCCTTTCACTGCATCAGAAACCATGAAAGAATCC
ATTCTCCATGCCATCAAACTGGGCTACAGACACATCGACGCCGCTGCTATTTACAACTCG
GAGCCTCCCGTGGGTGAAGCGATTGCGGAAGCTTTAGGCCTTGGCCTGATCAAATCAAGG
GCGGAGCTATTCATCACGTCAAAGCTTTGGTGCACCGACGCACACCCTGACCTAGTCCTC
CCTGCACTACGCAGAACTCTCAAGAATCTTGGGTTGGAATACCTTGATCTGTACCTCATA
CATTTCCCGGTGAGCTTGAAGCCTGGGAGTTGTGAGGTGCCCTTTGAAGAGAAGGATCTT
CTTCCTCTGGATTTCAAGTCTGTTTGGGAAGCCATGGAGGAGTGTCAAAGCCTCGGTCTA
TCAAAATTGATAGGAGTAAGCAACTTTTCTTGCAAGAAGCTGCAGGACCTGCTGGTCACT
GCAAAGATTTCACCCGCTGTCAATCAAGTGGAGATGAATCCACTATGGCAGCAGAAGAAG
CTGAGGGAGTTCTGTAATGGCAAGGGCATCCATGTCACAGCCTACTCCCCATTAGGTGGC
AGAGGAACTCTTTGGGGAACTAACCGAGTCCTTGACTGTAAGGTGCTGCAAGAGATTGCT
CAGGCGAAAGGAAAGACAGTAGCTCAGATATGTTTGAGGTGGGCTTTGGAGCAAGATGTG
AGTATTCTGGTGAAGAGCTTCAACAAGGAGAGGATAGAAGAGAACCTTGAGATATTGGAT
TGGAAGTTGAGCCCGGAAGAGTCCCAAAAGATCGATGATATTGAACAGCAAAGAGGGTTT
CTTGCACCTATGTTCGTATCAGAACATGGTCCTTACAAATCCCTCGAGGACTTCTGGGAC
GGAGAACTTTAGTGAATTAGAAAAGTCCACGAATAAAACCTTGTATGATGGTGAAAAGTT
GGATCTTTCCCTACTCCTTTTCTGCGTTGTTTGAGTGTGAACTCATTTTCATGGGTCCTT
TGTTATGCAAGAAATAAAAGTTGGTTAAGACCAACTTATTTGCTTTTAATCAAA