Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g06400.t01
CDS Infomation

cds chromosome:12X:1:6214722:6217246:1 gene:VIT_01s0011g06400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTGGAAAACACTGCTGCTGCCTCCACTGCCCCATCTTCTTCTTCCGATGCATTTACT
TCCTTAGAGAATGGTGTTTGTAATAAAAGGAAAAGGAGACCGGCTGGGACTCCAGATCCA
GATGCGGAGGTTGTGTCTCTCTCCCCCAAGACCTTACTGGAATCGGACCGGTATGTGTGT
GAGATCTGCAACCAAGGGTTTCAGAGAGACCAGAACCTTCAGATGCACCGGCGACGGCAC
AAGGTGCCCTGGAAATTGTTGAAGAGGGAGACACAGGAGGTTAAGAAGCGGGTGTTCGTG
TGCCCGGAGCCTAGCTGCTTGCACCATGACCCCTTACACGCTCTTGGCGATCTGGTCGGC
ATCAAAAAACATTTCAGACGGAAGCACAGCAATCACAAACAGTGGGTCTGTGAGAAGTGC
TCCAAAGGCTATGCTGTTCAATCTGATTACAAGGCGCACCTCAAGACCTGTGGTACCAGA
GGCCACTCCTGCGACTGCGGCCGTGTTTTTTCCAGAGTAGAGAGTTTCATCGAGCACCAA
GACGCTTGCGCTGTCCGACAAGTCCGGCCTGAATTACAAACATTGCAGCCGGCCTGCTCG
TCTAGAACGGCTTCGAGCACCAGCCCCTCCAGCGATAACAATTTCAGTAGAGTCCAGTTG
CCAGGACTCACACTGCCAAAACCAGCTGAAACCGTCTTCTTATGCTTGGAGCGGAATAAT
CCTTCTCCTTCTGATCTGCAGCACAATCTTGAGCTTCGGCTCCTACCATCCCCGAACACG
TACTCCTCGCGAAATTCAGATGAGAATCATGCCACTCATTTGAAGCTCTCTATCGGGTCA
TGCAACAGCGGCGAGATGAATGAACCCAGATGCGCCAGCGGTGATGCAAGTAGGAGCTCT
CCAAGGGAAATGAATACTGCAGAACCAGCATTGGCGGCGTCAAGGTTGAAGGAACTGGCT
AGTGAGCAGCTAAAGTTGGCTATGGCCGAAAAGGCCTCTGCTGAAGAGGCCAGACGAGAA
GCAAAGCGGCAAATTGAATTAGCGGAGCTGGAGTTTGCCAATGCGAGGAGAATCAGGCAA
CAGGCACAAGCCGAACTGGAAAAGGCCCAGATTTTGAAAGAGCAGGCTATAAAGAAAGTG
AGCTCCACCATTCTGCAAATCACTTGTCATGCTTGCAAGCACCAGTTCCAAGCAACAGCA
GCCGGAGCACCGTCGGATGAGACTTCACTGGCTATGAGTTACATGTCTTCAGCCCTAACA
GAAGGGGAAGGAGAGTAA

Peptide Sequence

PEP ID

VIT_01s0011g06400.t01
PEP Infomation

pep chromosome:12X:1:6214722:6217246:1 gene:VIT_01s0011g06400 transcript:VIT_01s0011g06400.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLENTAAASTAPSSSSDAFTSLENGVCNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVC
EICNQGFQRDQNLQMHRRRHKVPWKLLKRETQEVKKRVFVCPEPSCLHHDPLHALGDLVG
IKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQ
DACAVRQVRPELQTLQPACSSRTASSTSPSSDNNFSRVQLPGLTLPKPAETVFLCLERNN
PSPSDLQHNLELRLLPSPNTYSSRNSDENHATHLKLSIGSCNSGEMNEPRCASGDASRSS
PREMNTAEPALAASRLKELASEQLKLAMAEKASAEEARREAKRQIELAELEFANARRIRQ
QAQAELEKAQILKEQAIKKVSSTILQITCHACKHQFQATAAGAPSDETSLAMSYMSSALT
EGEGE

Transcript Sequence

Transcript ID

VIT_01s0011g06400.t01
Transcript Infomation

cdna chromosome:12X:1:6214722:6217246:1 gene:VIT_01s0011g06400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACAGCTGTACAGGCAGGGATTTCGATTTTGTTGCTTCAACCCAGATATTATTCATCAAAA
CGCTAGAATTCACCCATGTTGGAAAACACTGCTGCTGCCTCCACTGCCCCATCTTCTTCT
TCCGATGCATTTACTTCCTTAGAGAATGGTGTTTGTAATAAAAGGAAAAGGAGACCGGCT
GGGACTCCAGATCCAGATGCGGAGGTTGTGTCTCTCTCCCCCAAGACCTTACTGGAATCG
GACCGGTATGTGTGTGAGATCTGCAACCAAGGGTTTCAGAGAGACCAGAACCTTCAGATG
CACCGGCGACGGCACAAGGTGCCCTGGAAATTGTTGAAGAGGGAGACACAGGAGGTTAAG
AAGCGGGTGTTCGTGTGCCCGGAGCCTAGCTGCTTGCACCATGACCCCTTACACGCTCTT
GGCGATCTGGTCGGCATCAAAAAACATTTCAGACGGAAGCACAGCAATCACAAACAGTGG
GTCTGTGAGAAGTGCTCCAAAGGCTATGCTGTTCAATCTGATTACAAGGCGCACCTCAAG
ACCTGTGGTACCAGAGGCCACTCCTGCGACTGCGGCCGTGTTTTTTCCAGAGTAGAGAGT
TTCATCGAGCACCAAGACGCTTGCGCTGTCCGACAAGTCCGGCCTGAATTACAAACATTG
CAGCCGGCCTGCTCGTCTAGAACGGCTTCGAGCACCAGCCCCTCCAGCGATAACAATTTC
AGTAGAGTCCAGTTGCCAGGACTCACACTGCCAAAACCAGCTGAAACCGTCTTCTTATGC
TTGGAGCGGAATAATCCTTCTCCTTCTGATCTGCAGCACAATCTTGAGCTTCGGCTCCTA
CCATCCCCGAACACGTACTCCTCGCGAAATTCAGATGAGAATCATGCCACTCATTTGAAG
CTCTCTATCGGGTCATGCAACAGCGGCGAGATGAATGAACCCAGATGCGCCAGCGGTGAT
GCAAGTAGGAGCTCTCCAAGGGAAATGAATACTGCAGAACCAGCATTGGCGGCGTCAAGG
TTGAAGGAACTGGCTAGTGAGCAGCTAAAGTTGGCTATGGCCGAAAAGGCCTCTGCTGAA
GAGGCCAGACGAGAAGCAAAGCGGCAAATTGAATTAGCGGAGCTGGAGTTTGCCAATGCG
AGGAGAATCAGGCAACAGGCACAAGCCGAACTGGAAAAGGCCCAGATTTTGAAAGAGCAG
GCTATAAAGAAAGTGAGCTCCACCATTCTGCAAATCACTTGTCATGCTTGCAAGCACCAG
TTCCAAGCAACAGCAGCCGGAGCACCGTCGGATGAGACTTCACTGGCTATGAGTTACATG
TCTTCAGCCCTAACAGAAGGGGAAGGAGAGTAATAACAAACTGATGGTGGAGTAATCTTC
CACAAAAATTTCTCTCTTTTTACACCCAATCCCTATGGATACCCTTGTTAATTTGTGGCT
GTTTTCTTTTATCTCCTTATATCAAATGGCTGTTTGACCAAATGGTGTGATGTTGATCGA
ATGAGTGTTTTAACCAGTTCTTTTGTGTTCATCCGATATTTCTTTATTGTTTAATGGAAA
GATAGAAGACCATCATGGTTTGGCTT