Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g06340.t01
CDS Infomation

cds chromosome:12X:1:6138234:6155996:1 gene:VIT_01s0011g06340 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGTTTTTGAAGTGGCAGATCTCGGTAGTGTTGGTTGTCGGATTTGGGTTGAATCTG
TGCTTTGGGCACGAGGGTCACCATTCTGGATCCTGTGCATCTGCGGTCCACGAGTCTCAT
GCTCACCACCACTGCGATCACGGAAGCCATTCCCATCATCATCATCATCATCATAGTCCA
AGTGAGGAGAAGCTTACTATGTCCAAGCTCCCGGAGGAATTGGCTGAGGAGGAGGATCTG
AAGTTGTACGGGCTCGGGTCCCACTACAACCACCATGACAGCCATGATCATGATCATGAT
CATGATCGTGATGCTCACGACCATGGGCTCTCTGGTGTTGGTTTGTGGGTTCATGCAATG
GGCTGCTCACTGTTGGTGAGCATGGCTTCCCTTATTTGCCTCATTATTTTGCCAGTAATA
TTCATACAAGGAAAACCATCCAAGGCAGTTGTTGATTCATTGGCTGTATTTGGGGCAGGA
GCCATGTTAGGGGATGCTTTTCTTCACCAGTTGCCACATGCTTTTGGTGGCGAACATTCC
CATTCACATGATGAGCATGCTCATCATCATGGACATGAGCATTCACATTCACATTCTCTG
AAAGATCTTTCTGTTGGATTATCTGTTCTTGGTGGAATTGTACTTTTTCTTCTTGTGGAG
AAGCTTGTGAGGTATGTTGAAGGTATATCTGGTGGAGCTAATAGTGCATGGAGTCATGGT
CATCACCACCATCATCGTAAGAATGGTAAAAAGATGAAGGATGATAATGATGCTTGTGAC
AATCAGCAGTCTGAGTCTCTCAGTGAAAAGAATCAGAGTACATTGATTCCAGAATCTGTT
GACTGTTTAACTGGAGAAAAACAAACTGAACATGAATCTCTTCTTCGGAAGAGAAATAGT
ATTTCTGGTTTGAGAGAAGATAAATCAGATTCAGTTGCTGGAAATGGCTCCACCAATGAT
ATTAAGTCCTTAAAGGAAAAAGAACCTGCTCAATCACCATCAAATCTTGTGTTTGGCTAT
CTTAATCTCTTTTCTGATGGTGTTCACAATTTTACTGATGGGATGGCTTTGGGAAGTGCT
TTCTTGCTATATGGTTCTGTTGGTGGGTGGTCTCGAACTGTATTTTTGCTTGCTCATGAG
CTCCCTCAAGAGGTTGGTGACTTTGGAATTCTGGTAAGATCTGGCTTCAGTGTCTCAAAG
GCCCTCTTCTTCAACTTCCTCTCAGCTCTAGTTGCACTTGTTGGAACTGCTTTGGCTTTG
CTCCTTGGACAAGATCCGGGACAGTCATCATTGATTGAGGGATTTACAGCTGGTGGATTT
ATCTACATTGCAGTTGCTGGAGTGCTACCAGAAATGAACAATGGAAACTCAACATTGAAG
GGCACATTTATCCAATTAACCTCGCTGATATTGGGCATGGCTGTTGCCCTTGGTATTTCC
CTTGTAGAATGA

Peptide Sequence

PEP ID

VIT_01s0011g06340.t01
PEP Infomation

pep chromosome:12X:1:6138234:6155996:1 gene:VIT_01s0011g06340 transcript:VIT_01s0011g06340.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGFLKWQISVVLVVGFGLNLCFGHEGHHSGSCASAVHESHAHHHCDHGSHSHHHHHHHSP
SEEKLTMSKLPEELAEEEDLKLYGLGSHYNHHDSHDHDHDHDRDAHDHGLSGVGLWVHAM
GCSLLVSMASLICLIILPVIFIQGKPSKAVVDSLAVFGAGAMLGDAFLHQLPHAFGGEHS
HSHDEHAHHHGHEHSHSHSLKDLSVGLSVLGGIVLFLLVEKLVRYVEGISGGANSAWSHG
HHHHHRKNGKKMKDDNDACDNQQSESLSEKNQSTLIPESVDCLTGEKQTEHESLLRKRNS
ISGLREDKSDSVAGNGSTNDIKSLKEKEPAQSPSNLVFGYLNLFSDGVHNFTDGMALGSA
FLLYGSVGGWSRTVFLLAHELPQEVGDFGILVRSGFSVSKALFFNFLSALVALVGTALAL
LLGQDPGQSSLIEGFTAGGFIYIAVAGVLPEMNNGNSTLKGTFIQLTSLILGMAVALGIS
LVE

Transcript Sequence

Transcript ID

VIT_01s0011g06340.t01
Transcript Infomation

cdna chromosome:12X:1:6138234:6155996:1 gene:VIT_01s0011g06340 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGGTGAGCAGAGTGGTGGCAGTGATGGAAAGCAATGGTGTTTAGAAAAAAACACGCCTTG
AAAAGGTTAGAAGGCTTAATGAAAAGGAAATGGATGTGATCACATTTGGTGTTATAATCG
CCATTATCTTGCTTTTTTTTTGCGCCGTTTGCTTCATCACCATCGAGGGCACCTGCAAGC
GCCGTCCTTCCTAAACCTTTACATCCAAACACGCCCTTGCTGAAGCTCCTTTTAACTCTT
TTTTCTGTCCTTTCTTTTTTATTCTATTTTTTATTTTTCCGCAAGGAAATTAGGGTTTCT
GCTACGAAAAATTGGAAATGGGGTTTTTGAAGTGGCAGATCTCGGTAGTGTTGGTTGTCG
GATTTGGGTTGAATCTGTGCTTTGGGCACGAGGGTCACCATTCTGGATCCTGTGCATCTG
CGGTCCACGAGTCTCATGCTCACCACCACTGCGATCACGGAAGCCATTCCCATCATCATC
ATCATCATCATAGTCCAAGTGAGGAGAAGCTTACTATGTCCAAGCTCCCGGAGGAATTGG
CTGAGGAGGAGGATCTGAAGTTGTACGGGCTCGGGTCCCACTACAACCACCATGACAGCC
ATGATCATGATCATGATCATGATCGTGATGCTCACGACCATGGGCTCTCTGGTGTTGGTT
TGTGGGTTCATGCAATGGGCTGCTCACTGTTGGTGAGCATGGCTTCCCTTATTTGCCTCA
TTATTTTGCCAGTAATATTCATACAAGGAAAACCATCCAAGGCAGTTGTTGATTCATTGG
CTGTATTTGGGGCAGGAGCCATGTTAGGGGATGCTTTTCTTCACCAGTTGCCACATGCTT
TTGGTGGCGAACATTCCCATTCACATGATGAGCATGCTCATCATCATGGACATGAGCATT
CACATTCACATTCTCTGAAAGATCTTTCTGTTGGATTATCTGTTCTTGGTGGAATTGTAC
TTTTTCTTCTTGTGGAGAAGCTTGTGAGGTATGTTGAAGGTATATCTGGTGGAGCTAATA
GTGCATGGAGTCATGGTCATCACCACCATCATCGTAAGAATGGTAAAAAGATGAAGGATG
ATAATGATGCTTGTGACAATCAGCAGTCTGAGTCTCTCAGTGAAAAGAATCAGAGTACAT
TGATTCCAGAATCTGTTGACTGTTTAACTGGAGAAAAACAAACTGAACATGAATCTCTTC
TTCGGAAGAGAAATAGTATTTCTGGTTTGAGAGAAGATAAATCAGATTCAGTTGCTGGAA
ATGGCTCCACCAATGATATTAAGTCCTTAAAGGAAAAAGAACCTGCTCAATCACCATCAA
ATCTTGTGTTTGGCTATCTTAATCTCTTTTCTGATGGTGTTCACAATTTTACTGATGGGA
TGGCTTTGGGAAGTGCTTTCTTGCTATATGGTTCTGTTGGTGGGTGGTCTCGAACTGTAT
TTTTGCTTGCTCATGAGCTCCCTCAAGAGGTTGGTGACTTTGGAATTCTGGTAAGATCTG
GCTTCAGTGTCTCAAAGGCCCTCTTCTTCAACTTCCTCTCAGCTCTAGTTGCACTTGTTG
GAACTGCTTTGGCTTTGCTCCTTGGACAAGATCCGGGACAGTCATCATTGATTGAGGGAT
TTACAGCTGGTGGATTTATCTACATTGCAGTTGCTGGAGTGCTACCAGAAATGAACAATG
GAAACTCAACATTGAAGGGCACATTTATCCAATTAACCTCGCTGATATTGGGCATGGCTG
TTGCCCTTGGTATTTCCCTTGTAGAATGAAAGTGCATTTCGATTCTGTAACTATATTGAT
GTTAAATGTGATGTGACTATGTTAACTTTCTGTCTCATAAACTTTCTAGTTATGTAACTC
TATCCATTCCGTAGTTGTCTTTTGTGTAGCCATGCGAAGTAGAGCGGACCCTAGCCATCA
TCTTCCCTTCAGCATAGGGTTTTTGGGTGAACATTGGATTGAACCTATAAAGGAGGGCTA
GGATTTGAGGTTTTTGGGACCGTCTACGCCCATTGAGAATTTGCGAGCTCCTTACCTCTC
ATTTGCACTTACAAATTTTAAAAAATAAATGGTATGTAATGCTCACGTCTGGCGGACTCC
TTTTGTGTTTTTGCAAAGATAGAAATTGTTAAAATATGTATTCC