Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_01s0011g06140.t01
CDS Infomation	cds chromosome:12X:1:5940567:5942189:-1 gene:VIT_01s0011g06140 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6HFB5]
Sequence	ATGATTTCTTCTTGGAGAAGGCGGAGAGCTGGGCGGAGAGCAGCCAAGCTGCAGCAACAC GCAGAAGATGATATTGGAAGCATGGAATTGACTACTCCTAATCATTTTCGGTGTCCGATA TCTCTGGACTTGATGAAAGATCCGGTTACATTGTCCACAGGGATCACATATGATCGTGAG AGCATCGAGATGTGGATTGAAGCCGGAAACCGGACTTGCCCCATTACCAACCAGGTGTTG AGGAGTCTGGAGCCGATACCCAATCACACAATTCGGAAGATGATACAGGATTGGTGTGTC GAGAACCGGTCTTTTGGGATTGAGAGGATCCCAACGCCTCGAATTCCTTTGAGTTCTGTC GAGGTTACAGATATGCTTTCCAAGTTTAAGATGGCTTATCGGCGAGAGGATGAAGCTGGG TGCCGGGAGTTGGTGGCAAAGATGAAGTCAAAGGGGAAGGAAAGCGAGCGCAACAAGCGA TGCATTGTTATCAATGGGGCTGCTGGTGTTTTATCAGCTGCATTTGAAGCATTCTCGAGT GCCTCTTTCGATAAGTATGTTGCAGTCTTGGAGGATATCTTGGCGGCTCTCACTTGGATG TCTCCTCTTGATGGAGAAGCCAAATCTTACCTTAGCTCAGCCGCGTCTTTGAATTGTTTG GTATGGCTTTTGAAGTCTGGAGATTTGTCAGCAAGAGGAAACGCTGTTTCGACATTGAAA GAGCTACTTTCTTCAGATAAACGAAAGGTGTATGCTTTGTCTGAGATAGAAGGAGCGAAA GAAGCGTTGGTGAAGCTCGTCAAAGAGCCCATTTGCCCTACTGCAACAAAAACTTCATTG GTGGTCATCTTCCATATGGTTTCATCATCTCCTTCAAATGAAGATACCAAAGTAAGGTTT GTCGAGATGGGGTTAGTGGAGCTGCTCCTAGAACTACTGGTGGACTCTGAGAAAAGCGTA TGCGAGAAGGCATTGGGTGTTCTTGATGGCATTTGCGGCTGCGAGGAAGGGAGGGAAAAG GCCTACGGCCATGCTCTAACCATGCCTGTTCTGGTTAAGAAGTTATTGCGCGTTTCTGAT TTGGCTACCGAGTTCTCAGTTTCCATCCTTTGGAAGCTCAGCAAAAATGAGAAGAGGGAA GATGGAAGCGTCCTTGTTGAAGCTCTTCAAGTGGGTGCTTTTCAGAAGCTCTTGTTGCTC TTACAGGTTGGATGCTCTGACCGAACAAAGGAGAAGGCGACTGAGTTGTTGAAATTGTTG AACATTCATAGGGAGAGGTTGGAGTGCATTGACTCGATGGATTTCAAGGATCTCAAAAGG CCTTTTTGA

Peptide Sequence

PEP ID	VIT_01s0011g06140.t01
PEP Infomation	pep chromosome:12X:1:5940567:5942189:-1 gene:VIT_01s0011g06140 transcript:VIT_01s0011g06140.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6HFB5]
Sequence	MISSWRRRRAGRRAAKLQQHAEDDIGSMELTTPNHFRCPISLDLMKDPVTLSTGITYDRE SIEMWIEAGNRTCPITNQVLRSLEPIPNHTIRKMIQDWCVENRSFGIERIPTPRIPLSSV EVTDMLSKFKMAYRREDEAGCRELVAKMKSKGKESERNKRCIVINGAAGVLSAAFEAFSS ASFDKYVAVLEDILAALTWMSPLDGEAKSYLSSAASLNCLVWLLKSGDLSARGNAVSTLK ELLSSDKRKVYALSEIEGAKEALVKLVKEPICPTATKTSLVVIFHMVSSSPSNEDTKVRF VEMGLVELLLELLVDSEKSVCEKALGVLDGICGCEEGREKAYGHALTMPVLVKKLLRVSD LATEFSVSILWKLSKNEKREDGSVLVEALQVGAFQKLLLLLQVGCSDRTKEKATELLKLL NIHRERLECIDSMDFKDLKRPF

Transcript Sequence

Transcript ID	VIT_01s0011g06140.t01
Transcript Infomation	cdna chromosome:12X:1:5940567:5942189:-1 gene:VIT_01s0011g06140 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6HFB5]
Sequence	ATCATCAGTTTATTCAATTGTTGAACGCAAACCCAACACCACAACTTGTAGATTTCCTTC GTTTCCGAACTAATTACCTAAATTTTCATACGGGTTATTGGCAATGATTTCTTCTTGGAG AAGGCGGAGAGCTGGGCGGAGAGCAGCCAAGCTGCAGCAACACGCAGAAGATGATATTGG AAGCATGGAATTGACTACTCCTAATCATTTTCGGTGTCCGATATCTCTGGACTTGATGAA AGATCCGGTTACATTGTCCACAGGGATCACATATGATCGTGAGAGCATCGAGATGTGGAT TGAAGCCGGAAACCGGACTTGCCCCATTACCAACCAGGTGTTGAGGAGTCTGGAGCCGAT ACCCAATCACACAATTCGGAAGATGATACAGGATTGGTGTGTCGAGAACCGGTCTTTTGG GATTGAGAGGATCCCAACGCCTCGAATTCCTTTGAGTTCTGTCGAGGTTACAGATATGCT TTCCAAGTTTAAGATGGCTTATCGGCGAGAGGATGAAGCTGGGTGCCGGGAGTTGGTGGC AAAGATGAAGTCAAAGGGGAAGGAAAGCGAGCGCAACAAGCGATGCATTGTTATCAATGG GGCTGCTGGTGTTTTATCAGCTGCATTTGAAGCATTCTCGAGTGCCTCTTTCGATAAGTA TGTTGCAGTCTTGGAGGATATCTTGGCGGCTCTCACTTGGATGTCTCCTCTTGATGGAGA AGCCAAATCTTACCTTAGCTCAGCCGCGTCTTTGAATTGTTTGGTATGGCTTTTGAAGTC TGGAGATTTGTCAGCAAGAGGAAACGCTGTTTCGACATTGAAAGAGCTACTTTCTTCAGA TAAACGAAAGGTGTATGCTTTGTCTGAGATAGAAGGAGCGAAAGAAGCGTTGGTGAAGCT CGTCAAAGAGCCCATTTGCCCTACTGCAACAAAAACTTCATTGGTGGTCATCTTCCATAT GGTTTCATCATCTCCTTCAAATGAAGATACCAAAGTAAGGTTTGTCGAGATGGGGTTAGT GGAGCTGCTCCTAGAACTACTGGTGGACTCTGAGAAAAGCGTATGCGAGAAGGCATTGGG TGTTCTTGATGGCATTTGCGGCTGCGAGGAAGGGAGGGAAAAGGCCTACGGCCATGCTCT AACCATGCCTGTTCTGGTTAAGAAGTTATTGCGCGTTTCTGATTTGGCTACCGAGTTCTC AGTTTCCATCCTTTGGAAGCTCAGCAAAAATGAGAAGAGGGAAGATGGAAGCGTCCTTGT TGAAGCTCTTCAAGTGGGTGCTTTTCAGAAGCTCTTGTTGCTCTTACAGGTTGGATGCTC TGACCGAACAAAGGAGAAGGCGACTGAGTTGTTGAAATTGTTGAACATTCATAGGGAGAG GTTGGAGTGCATTGACTCGATGGATTTCAAGGATCTCAAAAGGCCTTTTTGATCAATCCA ATACCCAAAATCAGTAGTTTTAGAGAGAAGTTTAAAGGGTATTTCTCATGATTTACAGTT CAATGTACAAAATACGAAACATACTTAGGATAAATGCCATTGAAATTCTTACAAATAATT CTCTGCAAGAAGGCCCAAAGGTCTATTATGTGATTTCGAAGTTCTCTTGGTTTGCGACGA GTG