Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g05650.t01
CDS Infomation

cds chromosome:12X:1:5367518:5369117:1 gene:VIT_01s0011g05650 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTATCAGCCTTGCCTCCAATTTCTTTACGTTATCTTCGCACATTCGGACAAGGTCC
AAGAAGGAGAAGGCTCAACCTACAACTGCAGTTACGCTAATGATGGCCGCCAACGGCGAT
ATTCACTACGATCGAGCCAAAGAAGTCAAGCAGTTCGACGAATCCAAAATCGGCGTCAAA
GGTCTCGTCGACTCCGGCATCACCACTATCCCCCGAATCTTCATCCACCCAACCGAAACT
ATTTCCGACCTCAAATCCTCTAACCCATCCGGTTCCCATTCAATCCCCGTCATTTCCCTC
TCCGGCGACCGCTCCTCCGTCGTCGACCAAATCAGGCGCGCCTCCGCCGAATTCGGCTTC
TTCCAGATCATCAACCACGGCATCTCCACCGACGTCCTCGACCGCACGGTCGCCGCCATC
AGGGCCTTCAACGAGCAGCCAACGGAGGTTAAGGCGCAGTACTACCGGCGGGATATTGGA
ACGGGAGTGGCGTTCTCGACTAACTTCGACTTGTATCACTCCAAGGCGGCGAGCTGGAGA
GACACGCTTCAGGTGAGGCTGGGGCCGACACCTACGGAGTTCGATAAGATGCCTGAGGTG
TGCCGCAGGGAAGTGATGGAGTGGGACCGTGAGATGGTGAGGCTGGGAGAGGCGTTGATG
GGATTGATGTGCGAAGGGCTGGGGTTGGATGCGGGAAGATTGAAGGAGCTGACGTGTTTG
GAAGGAAGAATTATGGCGAGTCACTACTATCCGTACTGTCCTCAGCCTGAATTGACGATG
GGGCTCACCCCCCACACAGATCCGGGAGTGTTAACGGTGGTACTGCAGAATCAGGTAGGT
GGGTTGCAGGTTAAGCACGATGGGGCATGGCTGGATTTGAACCCTGTGCCCGGTGCTCTC
GTCATCAACGTGGGCGATATGCTTCAGGTAATGAGCAATGATGAATACAAAAGCGTGGAG
CATAGGGTGGCGGGGAACCCATGTCGGGAAGCAAGAGTTTCAATTGCAGTTTTCTTCAAT
CCGGGCGATAGGCATTCCTTGTTTGGGCCATTGCCGGAGCTCATATCAGCAGAGAAACCA
GCTGTGTACAAGAGCTTCACATTCGATGAGTTTATGACAAGGTTCTTTACTAAGGAGTTG
GATGGTAAGTCTTTGATAAATTTCTTTAAACTCTCACAATGA

Peptide Sequence

PEP ID

VIT_01s0011g05650.t01
PEP Infomation

pep chromosome:12X:1:5367518:5369117:1 gene:VIT_01s0011g05650 transcript:VIT_01s0011g05650.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSISLASNFFTLSSHIRTRSKKEKAQPTTAVTLMMAANGDIHYDRAKEVKQFDESKIGVK
GLVDSGITTIPRIFIHPTETISDLKSSNPSGSHSIPVISLSGDRSSVVDQIRRASAEFGF
FQIINHGISTDVLDRTVAAIRAFNEQPTEVKAQYYRRDIGTGVAFSTNFDLYHSKAASWR
DTLQVRLGPTPTEFDKMPEVCRREVMEWDREMVRLGEALMGLMCEGLGLDAGRLKELTCL
EGRIMASHYYPYCPQPELTMGLTPHTDPGVLTVVLQNQVGGLQVKHDGAWLDLNPVPGAL
VINVGDMLQVMSNDEYKSVEHRVAGNPCREARVSIAVFFNPGDRHSLFGPLPELISAEKP
AVYKSFTFDEFMTRFFTKELDGKSLINFFKLSQ

Transcript Sequence

Transcript ID

VIT_01s0011g05650.t01
Transcript Infomation

cdna chromosome:12X:1:5367518:5369117:1 gene:VIT_01s0011g05650 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTGGTACGTGAAGAGGGGGTGGAATAGAGAAAAAAAATAAGTCAAAGGATAGTTTTGTCT
ATCACTATGTTATATCTTTGTAGTCAATGATAGGAATACCTACATCAATCATCAAGCCCA
AGTGGGCTAAAATCACAATTCTCCTAATTTTTTATTGACAAACGTCGACATGTCTATCAG
CCTTGCCTCCAATTTCTTTACGTTATCTTCGCACATTCGGACAAGGTCCAAGAAGGAGAA
GGCTCAACCTACAACTGCAGTTACGCTAATGATGGCCGCCAACGGCGATATTCACTACGA
TCGAGCCAAAGAAGTCAAGCAGTTCGACGAATCCAAAATCGGCGTCAAAGGTCTCGTCGA
CTCCGGCATCACCACTATCCCCCGAATCTTCATCCACCCAACCGAAACTATTTCCGACCT
CAAATCCTCTAACCCATCCGGTTCCCATTCAATCCCCGTCATTTCCCTCTCCGGCGACCG
CTCCTCCGTCGTCGACCAAATCAGGCGCGCCTCCGCCGAATTCGGCTTCTTCCAGATCAT
CAACCACGGCATCTCCACCGACGTCCTCGACCGCACGGTCGCCGCCATCAGGGCCTTCAA
CGAGCAGCCAACGGAGGTTAAGGCGCAGTACTACCGGCGGGATATTGGAACGGGAGTGGC
GTTCTCGACTAACTTCGACTTGTATCACTCCAAGGCGGCGAGCTGGAGAGACACGCTTCA
GGTGAGGCTGGGGCCGACACCTACGGAGTTCGATAAGATGCCTGAGGTGTGCCGCAGGGA
AGTGATGGAGTGGGACCGTGAGATGGTGAGGCTGGGAGAGGCGTTGATGGGATTGATGTG
CGAAGGGCTGGGGTTGGATGCGGGAAGATTGAAGGAGCTGACGTGTTTGGAAGGAAGAAT
TATGGCGAGTCACTACTATCCGTACTGTCCTCAGCCTGAATTGACGATGGGGCTCACCCC
CCACACAGATCCGGGAGTGTTAACGGTGGTACTGCAGAATCAGGTAGGTGGGTTGCAGGT
TAAGCACGATGGGGCATGGCTGGATTTGAACCCTGTGCCCGGTGCTCTCGTCATCAACGT
GGGCGATATGCTTCAGGTAATGAGCAATGATGAATACAAAAGCGTGGAGCATAGGGTGGC
GGGGAACCCATGTCGGGAAGCAAGAGTTTCAATTGCAGTTTTCTTCAATCCGGGCGATAG
GCATTCCTTGTTTGGGCCATTGCCGGAGCTCATATCAGCAGAGAAACCAGCTGTGTACAA
GAGCTTCACATTCGATGAGTTTATGACAAGGTTCTTTACTAAGGAGTTGGATGGTAAGTC
TTTGATAAATTTCTTTAAACTCTCACAATGAGGACTGAGCATTCCATACAAGCGCATACT
CGTTTCAGAATGCTAGAGCCGTGCCTTTCTTCTAACAGGTCGACTTGTATGTACTTTGAA
CCTTTACAACTTCCCTTTTAGGGAAAGTAGCATGTAAAAACATTTTTCATAATAGTGTTG
GTGAT