Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g05600.t01
CDS Infomation

cds chromosome:12X:1:5320670:5323289:-1 gene:VIT_01s0011g05600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTGTAAGCGTTTCTCTTTGTCTCTCGTCTCTCTTGATTTTTCTCATCACCTTCTCA
GCTCTGCCAAGCCCTTCAATCTCTGCCATAGACACCTTCATCTTTGGTGGGTGCGCTCAG
ATAAGGTACGTTCAGGGCTCACCCTACGAGTCCAACGTCAATTCTATTCTCACCTCCCTC
GTCAACTCAGCCTCGGCTCCTGGCATCGCCGCCCTCTACAACAAGTACACCGTCCCTGGC
CCCACCTCTCAGGACACCGTCTCCGGCCTCTACCAATGCAGAGGCGACCTCAACCCCGGC
GACTGTGCTCGCTGCGTGGCTCGCTGCGTGTCTCAACTCGGAGCCCTCTGTCTTGACTCC
TGCGGCGGCGCGTTGCAGCTCGAAGGATGCTTCGTCAAGTACGATAACGCCACCTTCCTA
GGGGTGGAAGACAAGACGGTGGTGGTGAAGAAATGTGGGCCGTCGATTGGGTATGACTCC
GACGCGTTGACCCGCCGCGATGCCGTGCTGGGCTACCTGGAGGGCGGGACCCAGACTTTT
CGGGTCGGGGGGTCAGGGAACATCCAGGGTATGGCGCAGTGCGTAGGGGATCTGAGTGCG
AGCGAGTGTCAGGATTGCGTGTCGGACGCCATCGGACGGCTGAGAAGCGAGTGTGGGACC
TCTGCTTGGGGAGACATGTTCTTGGCCAAGTGCTACGCGCGGTTCTGGGAAGGTGGAGAT
CGATCGCACACTGCAAATGATGGGTATGGTTATGATCATCATGATCATGATAACGACAAT
GATGAAGACATCGAAAAGACATTAGCAATTCTCATCGGGCTTATAGCAGGGGTTGCGTTA
ATCATAGTTTTCCTTTCCTTCTTAAGAAAAGTGCTTGAAGGAAAAGATGGCAAATGA

Peptide Sequence

PEP ID

VIT_01s0011g05600.t01
PEP Infomation

pep chromosome:12X:1:5320670:5323289:-1 gene:VIT_01s0011g05600 transcript:VIT_01s0011g05600.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSVSVSLCLSSLLIFLITFSALPSPSISAIDTFIFGGCAQIRYVQGSPYESNVNSILTSL
VNSASAPGIAALYNKYTVPGPTSQDTVSGLYQCRGDLNPGDCARCVARCVSQLGALCLDS
CGGALQLEGCFVKYDNATFLGVEDKTVVVKKCGPSIGYDSDALTRRDAVLGYLEGGTQTF
RVGGSGNIQGMAQCVGDLSASECQDCVSDAIGRLRSECGTSAWGDMFLAKCYARFWEGGD
RSHTANDGYGYDHHDHDNDNDEDIEKTLAILIGLIAGVALIIVFLSFLRKVLEGKDGK

Transcript Sequence

Transcript ID

VIT_01s0011g05600.t01
Transcript Infomation

cdna chromosome:12X:1:5320670:5323289:-1 gene:VIT_01s0011g05600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTTTTTATTTGGAAAAATGATCATCATATACTATATACAAAAATCAAGTTGTCTCACTGC
CTTACGTAATTCTGCGTGAAGCAACCACAGCCTGCCAAAGTGCTCATAGACTCGTACACT
TCCATTACTTCCATTCCATCAGCCTAGACCTTTCAGTTCTTCCTGCTCTCTAACTTTGGC
TAACCAGACTGGACAGCATGTCTGTAAGCGTTTCTCTTTGTCTCTCGTCTCTCTTGATTT
TTCTCATCACCTTCTCAGCTCTGCCAAGCCCTTCAATCTCTGCCATAGACACCTTCATCT
TTGGTGGGTGCGCTCAGATAAGGTACGTTCAGGGCTCACCCTACGAGTCCAACGTCAATT
CTATTCTCACCTCCCTCGTCAACTCAGCCTCGGCTCCTGGCATCGCCGCCCTCTACAACA
AGTACACCGTCCCTGGCCCCACCTCTCAGGACACCGTCTCCGGCCTCTACCAATGCAGAG
GCGACCTCAACCCCGGCGACTGTGCTCGCTGCGTGGCTCGCTGCGTGTCTCAACTCGGAG
CCCTCTGTCTTGACTCCTGCGGCGGCGCGTTGCAGCTCGAAGGATGCTTCGTCAAGTACG
ATAACGCCACCTTCCTAGGGGTGGAAGACAAGACGGTGGTGGTGAAGAAATGTGGGCCGT
CGATTGGGTATGACTCCGACGCGTTGACCCGCCGCGATGCCGTGCTGGGCTACCTGGAGG
GCGGGACCCAGACTTTTCGGGTCGGGGGGTCAGGGAACATCCAGGGTATGGCGCAGTGCG
TAGGGGATCTGAGTGCGAGCGAGTGTCAGGATTGCGTGTCGGACGCCATCGGACGGCTGA
GAAGCGAGTGTGGGACCTCTGCTTGGGGAGACATGTTCTTGGCCAAGTGCTACGCGCGGT
TCTGGGAAGGTGGAGATCGATCGCACACTGCAAATGATGGGTATGGTTATGATCATCATG
ATCATGATAACGACAATGATGAAGACATCGAAAAGACATTAGCAATTCTCATCGGGCTTA
TAGCAGGGGTTGCGTTAATCATAGTTTTCCTTTCCTTCTTAAGAAAAGTGCTTGAAGGAA
AAGATGGCAAATGAATCAGAATCCGTGGAAGTCTGTTCCAGTTACCGTTCCATTCTCCTT
CCTTCCTCTGGTAAATCAAGTCGCTTTGCTTTCGGTGGTTCCTTTGCTTCACTTTTTTTC
TCTTTTGTTTTCTTTCCATCTCTCTTCTGTAGTTTCCTTCCCACTTCCTCTAAAGCATAC
CTTAAAGGCTAGCGAGAAAGATGTTTTTGGAAACAGGTACCTTGAAATATGTGAAAAGAA
AATTGCAACGAGAAGAGAAGTCCCACACATTCCACATTCCCCACACCCACTTAACAATGT
TAGCTTTGTCTACTAATATGTAAATGGCATATTCTTTTCACTGGAAAAAGTGCTTTGTGA
TGCTTAAGTTAAGTAAACATTGTTGGATCTTTTGTATTGTTTTTGCTGAATTTTTACCTT
TCTTGCAAAATTTAGATA