Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g05560.t01
CDS Infomation

cds chromosome:12X:1:5284036:5288161:-1 gene:VIT_01s0011g05560 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGAGAGATTTCATGGGTTTGAGTTCAAAAGAGCCCCTGGCTGTTGTGAAAGAGGAG
ATTATTGAAGGAGCATTTACTAAAGGTTCGGGAATACAGTGGCCCTTTTCAAACAAGATC
TCTGCACTTCCTCATTTCATGTCTTTTAAGACTGCGCAAGAAGACAAGTCCAAAAAGGTT
GCATCTGATTCCCTTGTGACTTCTGGATTTGACCCAAGTAACAAATGCCCAGCTGGTGAA
ATGCAGAAAGCAGTCAATCCCGATAGGCAAGGTGGAAGTTTTGCAGTGACAGCTTATCCT
GTGCAACATGATTCACATTTAATGAATCATCATCCTCATGATGTCAAGATGTTTCCAGTC
TCAAACCAAACGATTTCAGTTTCCATGGGCAACCCCTTTTTCAAGACCCATTTTGCTGCA
GCTGGTCAGAACATGGTTGGTGCTGCCCTGAAGCAACAATTACTTGGAGGAATTCCTGTT
TCAGCTCCACATGGAATTCTGCCCTCTGCTGGTTCTTTTGCTGGAATCACTGAACCATGG
AATAATTTTAAGACATCTGGATCTCCTTCCCAATTGACCATCTTTTATGCTGGTACAGTG
AATGTCTATGATGATATCTCGCCTGAGAAGGCTCAGGCTATCATGTTCTTGGCTGGGAAT
GGGGCTTCCATGGCTTCTAGAATGGGGCAACCGAGAGCTCAAGTCCAGACACCTGCTTCA
AAGCTGGCAGCAGGTGATGGTGTCCTTGCAAACCAGCCCATGAATATATCACCTTGCTCT
GGTCTCTCAAGCCCCATATCTGTTTCTTCACATCCTGTTGCTCAGTCTGGGAGTGGATCT
ACTAGCACCGAGGAAGTGTTGGCTGCTAAAACCACAGGGGTTTCTGCCACTCCTGTTACC
AAATTGGATTCCCCTAAAATGCTCTCTGTTGCTGCAACACCTATGATGCCATCAGCTGTT
CCTCAAGCTCGCAAAGCATCCTTGGCTCGGTTTTTGGAGAAGCGCAAGGAGAGGGTGATG
AGCACAGCGCCATACAATATCAGCAAGAAATCCCCTGAATGTGCCACCCCAGGATCTAAT
GGCATGAGTTACACAGCGAGTTCTGGTGCAGGTGCAAGTGCTGGTGCTGGTGCTCTTTCA
GCTAACAAGGAGTAG

Peptide Sequence

PEP ID

VIT_01s0011g05560.t01
PEP Infomation

pep chromosome:12X:1:5284036:5288161:-1 gene:VIT_01s0011g05560 transcript:VIT_01s0011g05560.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MERDFMGLSSKEPLAVVKEEIIEGAFTKGSGIQWPFSNKISALPHFMSFKTAQEDKSKKV
ASDSLVTSGFDPSNKCPAGEMQKAVNPDRQGGSFAVTAYPVQHDSHLMNHHPHDVKMFPV
SNQTISVSMGNPFFKTHFAAAGQNMVGAALKQQLLGGIPVSAPHGILPSAGSFAGITEPW
NNFKTSGSPSQLTIFYAGTVNVYDDISPEKAQAIMFLAGNGASMASRMGQPRAQVQTPAS
KLAAGDGVLANQPMNISPCSGLSSPISVSSHPVAQSGSGSTSTEEVLAAKTTGVSATPVT
KLDSPKMLSVAATPMMPSAVPQARKASLARFLEKRKERVMSTAPYNISKKSPECATPGSN
GMSYTASSGAGASAGAGALSANKE

Transcript Sequence

Transcript ID

VIT_01s0011g05560.t01
Transcript Infomation

cdna chromosome:12X:1:5284036:5288161:-1 gene:VIT_01s0011g05560 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCTCTCTCCCTCACTTGCTGTCGTTGGAAGCATTTCGGCGGATGAGAAAGCTTTTCTTC
CTCTCTCTAGCTTGGAGCGTGATAAGGATTCTAGGGTTTGGTGTTACAGAATAAAAGAGC
TTCACCATTTGATCTGTGAATCTAGGATTTTCTCGGCTTGGTTTATTTTGAGCTCTGAAA
TGGAGAGAGATTTCATGGGTTTGAGTTCAAAAGAGCCCCTGGCTGTTGTGAAAGAGGAGA
TTATTGAAGGAGCATTTACTAAAGGTTCGGGAATACAGTGGCCCTTTTCAAACAAGATCT
CTGCACTTCCTCATTTCATGTCTTTTAAGACTGCGCAAGAAGACAAGTCCAAAAAGGTTG
CATCTGATTCCCTTGTGACTTCTGGATTTGACCCAAGTAACAAATGCCCAGCTGGTGAAA
TGCAGAAAGCAGTCAATCCCGATAGGCAAGGTGGAAGTTTTGCAGTGACAGCTTATCCTG
TGCAACATGATTCACATTTAATGAATCATCATCCTCATGATGTCAAGATGTTTCCAGTCT
CAAACCAAACGATTTCAGTTTCCATGGGCAACCCCTTTTTCAAGACCCATTTTGCTGCAG
CTGGTCAGAACATGGTTGGTGCTGCCCTGAAGCAACAATTACTTGGAGGAATTCCTGTTT
CAGCTCCACATGGAATTCTGCCCTCTGCTGGTTCTTTTGCTGGAATCACTGAACCATGGA
ATAATTTTAAGACATCTGGATCTCCTTCCCAATTGACCATCTTTTATGCTGGTACAGTGA
ATGTCTATGATGATATCTCGCCTGAGAAGGCTCAGGCTATCATGTTCTTGGCTGGGAATG
GGGCTTCCATGGCTTCTAGAATGGGGCAACCGAGAGCTCAAGTCCAGACACCTGCTTCAA
AGCTGGCAGCAGGTGATGGTGTCCTTGCAAACCAGCCCATGAATATATCACCTTGCTCTG
GTCTCTCAAGCCCCATATCTGTTTCTTCACATCCTGTTGCTCAGTCTGGGAGTGGATCTA
CTAGCACCGAGGAAGTGTTGGCTGCTAAAACCACAGGGGTTTCTGCCACTCCTGTTACCA
AATTGGATTCCCCTAAAATGCTCTCTGTTGCTGCAACACCTATGATGCCATCAGCTGTTC
CTCAAGCTCGCAAAGCATCCTTGGCTCGGTTTTTGGAGAAGCGCAAGGAGAGGGTGATGA
GCACAGCGCCATACAATATCAGCAAGAAATCCCCTGAATGTGCCACCCCAGGATCTAATG
GCATGAGTTACACAGCGAGTTCTGGTGCAGGTGCAAGTGCTGGTGCTGGTGCTCTTTCAG
CTAACAAGGAGTAGCCATAATGTCTGAGGCCAAATTAGAACAACGAATTTATTGCAAATT
TCTGTAGTTAAATTATAGAAGTCGGAAATTCCAATTACTCCACTGTTTTGTTGTAATCCG
TAATCCCTGCTTGTTTGACTCTAAATCTTGACTAATATTTTCTTAATATTTTTTCTTACT
TGAATGTGGTGGTAGGATCCTTCTCCACCACCAATATGATACTCTGTATGATGTGTACGC
ATTCAACTTTTTGTTAAGTTGTGAAAATAATTGCTAGATAAGTATACTGTATACTTTAGC
CA