Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g05500.t01
CDS Infomation

cds chromosome:12X:1:5138977:5143959:-1 gene:VIT_01s0011g05500 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTTCCTTTTCTTTTTCTCCTCCTTTTAGTGGTATCTGGCACCGTTGCTGATGAAGAT
GCCTTCATTGGTGTAAATATAGGCACAGACCTCTCTAATATGCCAAACCCAACTCAAGTG
GTGGCTCTCCTTAAGTCTCAGCAAATCCGACATGTCAGGCTCTATGATGCTGATCGTGCC
ATGCTTCTTGCACTTGCAAATACAGGAATCCGTGTAACTGTTTCAGTGCCCAATGACCAA
CTCCTTGGCATTGGCCAGTCCAATGCCACTGCAGCCAACTGGGTTGCACGGAATGTGCTA
GCTCACATCCCTGCCACTAACATCACAGCCATAGCTGTTGGATCTGAAGTGCTAACTACC
CTCCCAAATGCAGCACCAGTTCTAGTCTCTGCCTTAAAATTTATCCACTCTGCCCTTGTT
GCTGCCAATCTTGATTCCCAAATCAAAGTCTCTACTCCACACTCTTCTTCCATCTTACTT
GACTCATTCCCACCTTCCCAAGCCTTTTTTAACCGCTCCTGGGAACCGGTGATGGTTCCG
TTGCTCAAATTTTTGCAGTCCACAAGTTCATATCTTATGCTCAATGTGTACCCATATTAC
GATTACATGCAATCAAATAGTGTGATCCCATTGGATTATGCACTCTTCCGTCCTCTCCCT
CCAAACAAGGAAGCTGTGGATGCTAATACGCTCCTGCACTATACTAATGTCTTTGATGCT
GTTGTTGATGCAGCGTTTTTTGCAATGTCATACCTAAACTTCACCAATATTCCCCTTGTA
GTTCTTGAATCAGGCTGGCCTTCCAAGGGCGGCTCATCTGAGCCAGATGCTACTATTGAC
AATGCTAACACTTACAACAGTAACTTGATTAGGCATGTGCTTAACAACACAGGGACTCCC
AAACACCCTGGTATTGCTGTTAGTACATACATTTACGAATTGTACAATGAGGATTTGAGA
CCTGGGTCGGTCTCAGAGAAGAATTGGGGACTTTTTGATGCAAATGGAATGCCAGTTTAT
ATCCTACATTTGACGGGTTCTGGGACGGTTTTGGCAAATGACACCACAAATCAGACATAT
TGTGTTGCAAGGGATGGTGCTGACCCAAAGATGCTACAGGCAGCACTGGATTGGGCTTGT
GGACCAGGCAAAGTGGACTGCTCCCCTCTGTTGCAGGGGCAACCATGTTCTGAACCAGAC
AATGTGGTTGCACATGCAACATATGCTTTTGATGCATACTATCACCAGATGGCTATGGGT
CAAGGAACCTGTTACTTCAATGGGGTGGCGACCATCACTACCACTGACCCAAGTCATGGG
TCATGCAAATTCCCAGGAAGTGCTGGAAGAAATAACACTTTCATAAATGGCACATCACTG
GCTCCATCTTCAAATTCAACAAGTTCTGGCTCTCAATCACAATATTTCTATAGCAGTGGT
GCCTTAATGAGCTGTATGATTATTGGTATTTTAGTTTGGAGTGCAGTTTTGTTGTAA

Peptide Sequence

PEP ID

VIT_01s0011g05500.t01
PEP Infomation

pep chromosome:12X:1:5138977:5143959:-1 gene:VIT_01s0011g05500 transcript:VIT_01s0011g05500.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVPFLFLLLLVVSGTVADEDAFIGVNIGTDLSNMPNPTQVVALLKSQQIRHVRLYDADRA
MLLALANTGIRVTVSVPNDQLLGIGQSNATAANWVARNVLAHIPATNITAIAVGSEVLTT
LPNAAPVLVSALKFIHSALVAANLDSQIKVSTPHSSSILLDSFPPSQAFFNRSWEPVMVP
LLKFLQSTSSYLMLNVYPYYDYMQSNSVIPLDYALFRPLPPNKEAVDANTLLHYTNVFDA
VVDAAFFAMSYLNFTNIPLVVLESGWPSKGGSSEPDATIDNANTYNSNLIRHVLNNTGTP
KHPGIAVSTYIYELYNEDLRPGSVSEKNWGLFDANGMPVYILHLTGSGTVLANDTTNQTY
CVARDGADPKMLQAALDWACGPGKVDCSPLLQGQPCSEPDNVVAHATYAFDAYYHQMAMG
QGTCYFNGVATITTTDPSHGSCKFPGSAGRNNTFINGTSLAPSSNSTSSGSQSQYFYSSG
ALMSCMIIGILVWSAVLL

Transcript Sequence

Transcript ID

VIT_01s0011g05500.t01
Transcript Infomation

cdna chromosome:12X:1:5138977:5143959:-1 gene:VIT_01s0011g05500 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AATGAGGTTTTGTACCCATGAATCAATGGTTCCTTTTCTTTTTCTCCTCCTTTTAGTGGT
ATCTGGCACCGTTGCTGATGAAGATGCCTTCATTGGTGTAAATATAGGCACAGACCTCTC
TAATATGCCAAACCCAACTCAAGTGGTGGCTCTCCTTAAGTCTCAGCAAATCCGACATGT
CAGGCTCTATGATGCTGATCGTGCCATGCTTCTTGCACTTGCAAATACAGGAATCCGTGT
AACTGTTTCAGTGCCCAATGACCAACTCCTTGGCATTGGCCAGTCCAATGCCACTGCAGC
CAACTGGGTTGCACGGAATGTGCTAGCTCACATCCCTGCCACTAACATCACAGCCATAGC
TGTTGGATCTGAAGTGCTAACTACCCTCCCAAATGCAGCACCAGTTCTAGTCTCTGCCTT
AAAATTTATCCACTCTGCCCTTGTTGCTGCCAATCTTGATTCCCAAATCAAAGTCTCTAC
TCCACACTCTTCTTCCATCTTACTTGACTCATTCCCACCTTCCCAAGCCTTTTTTAACCG
CTCCTGGGAACCGGTGATGGTTCCGTTGCTCAAATTTTTGCAGTCCACAAGTTCATATCT
TATGCTCAATGTGTACCCATATTACGATTACATGCAATCAAATAGTGTGATCCCATTGGA
TTATGCACTCTTCCGTCCTCTCCCTCCAAACAAGGAAGCTGTGGATGCTAATACGCTCCT
GCACTATACTAATGTCTTTGATGCTGTTGTTGATGCAGCGTTTTTTGCAATGTCATACCT
AAACTTCACCAATATTCCCCTTGTAGTTCTTGAATCAGGCTGGCCTTCCAAGGGCGGCTC
ATCTGAGCCAGATGCTACTATTGACAATGCTAACACTTACAACAGTAACTTGATTAGGCA
TGTGCTTAACAACACAGGGACTCCCAAACACCCTGGTATTGCTGTTAGTACATACATTTA
CGAATTGTACAATGAGGATTTGAGACCTGGGTCGGTCTCAGAGAAGAATTGGGGACTTTT
TGATGCAAATGGAATGCCAGTTTATATCCTACATTTGACGGGTTCTGGGACGGTTTTGGC
AAATGACACCACAAATCAGACATATTGTGTTGCAAGGGATGGTGCTGACCCAAAGATGCT
ACAGGCAGCACTGGATTGGGCTTGTGGACCAGGCAAAGTGGACTGCTCCCCTCTGTTGCA
GGGGCAACCATGTTCTGAACCAGACAATGTGGTTGCACATGCAACATATGCTTTTGATGC
ATACTATCACCAGATGGCTATGGGTCAAGGAACCTGTTACTTCAATGGGGTGGCGACCAT
CACTACCACTGACCCAAGTCATGGGTCATGCAAATTCCCAGGAAGTGCTGGAAGAAATAA
CACTTTCATAAATGGCACATCACTGGCTCCATCTTCAAATTCAACAAGTTCTGGCTCTCA
ATCACAATATTTCTATAGCAGTGGTGCCTTAATGAGCTGTATGATTATTGGTATTTTAGT
TTGGAGTGCAGTTTTGTTGTAAATGCAGTTCTATCTTCTGCGGTTTTCCTTTTTTAACTG
CACTTGAATCCTTGGAAACATTTGGTTTTCACTTCTGTTTGAAGACTTGCAGCATGCCCA
GTTTTGTTCCATCAAGGAAGGTAAGGGGTAGCGAGATTGATTTAAGGCAAGTAGTTGTGA
GTGGTTTGCCGGATTCTGTACAAACCAACCAAAGGGATTATATGGGATTTATTGTTGTAA
CCATCTTGCTGGGTCAGCTTGACTCACATCAATGTTTTATTCTTTCATCTGGTTTGCAGT
GTCTATCTTAAGATGATGTATGATGATTCTAACCTACTCACTCAATTATTGGCAAATTTT
TTGTTTGCTTA