Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_01s0011g05380.t01
CDS Infomation	cds chromosome:12X:1:5015889:5018170:-1 gene:VIT_01s0011g05380 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase [Source:UniProtKB/TrEMBL;Acc:F6HFF6]
Sequence	ATGGCTAGACTCTTATTGCATTTTTTGAGTGCTTATTTTGTGGTATTATACGTGAGGGTG GTGGATGGTGCTCCAATATCATCATGCAGTCAGACCCCATATCCTGAAGTATGCAATTAT TTCATTGGCAATTACAAGCCCACTGCAGGGATTGATGAAATTCAGTTCCCATTTCGCGAC AGGGTCCTTGGAGTCACAATGAACCAAGCCAAGCGACTCCACCTGCTGGTTTCAGCTATG GACTTGAGCTCGTCGGATGAGCGAACCAAGTTGGCTTGGGCTGATTGTTTGGAGCTTTAT GAGAACACCATTGACCTGGTGAATCGTTCCATCAACTCTATCAGTCCAGCGGTCATGTTT GACTCTCAAACATGGTTAAGTGCTGCAATTGCCAATCAGCAAACTTGTCTAGACGGATTT ATTGATTTCAATCCATCTTCTGATCAGTTTCAATCCTTCCCATCTATGTCAATCTCAACC AGTAACTTCTCAAAGTTGCTTAGCAATTCGCTGGCAATAAACAAGGCAGCAGTTTCCGCA ACAAGTATTCTATCTAACAATCAGGCTGGTGGCCGACGCTTGCTTTCTAATGGCTTCCCA ACATGGGTTTCAGCTGCTGATAGAAAGCTTCTCCAGTCATCTGGGGCAGCTTCAAGGGCT GATATTGTGGTAGCCCATGACGGGTCCGGTAATTACAAAACCATTTCTGAGGCTGTTGCG GCGTCGGTTAAGCTAAGAAGCGGGACTAAGAGATTTGTTATATACGTGAAAGCGGGTGTT TATAGAGAAAATGTGGAAATCAAGAGGAAAATGAAAAATATCATGATAATCGGAGATGGG AAAGATGCTACCATTGTCACCGGCAATAAGAATGTTCAAGATGGCTCCACAACTTTCCGT TCTGCCACTTTCGCTGTTTCGGGTCATGGCTTCATTGCTCGAGATATGACATTTGAAAAC ACGGCTGGACCTGAGAAACACCAAGCAGTTGCACTTCGCTCAAGCTCGGATGGTTCGGTT TTCTATGGTTGTAGCTTTAAAGGCTACCAAGACACCTTATATGTGCACACACAACGCCAA TTCTACCGCAGCTGCGATGTATATGGAACTGTGGACTTCATCTTTGGAGATGCAGTTGCG GTTCTCCAGAACTGCAACATCTACGTGAGGAGACCCATGAGCAACCAAGCAAACGTCATC ACCGCTCAGGGAAGATCCGATCAAAATGAAAATACTGGGATTTCAATCCATAATTCGCGT GTCATGGCAGCTCCGGACTTGAGACCTGTTCAGAGTCGGTTTAAGACGTATCTCGGGCGG CCATGGCGTAAGTACTCAAGGACAGTTTTCATGAAGACTTCTCTAGACGGCTTGATCCAT CCTGAGGGGTGGAGTCCATGGAAAGGAGACTTTGGTCTGTCAACTCTGTATTATGGTGAG TATATGAACACAGGAAGCGGTGCAAGTACTCGTGGCAGGGTGAAGTGGCGAGGATATCAT GTTATTACTAGCGCAGCGGAGGCCGACAAATTTACAGTTGGCAGATTCTTGGTCGGAGAT TCATGGATTCCGACCACTGGAGTTCCCTATGCTTCTGGGTTATGA

Peptide Sequence

PEP ID	VIT_01s0011g05380.t01
PEP Infomation	pep chromosome:12X:1:5015889:5018170:-1 gene:VIT_01s0011g05380 transcript:VIT_01s0011g05380.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase [Source:UniProtKB/TrEMBL;Acc:F6HFF6]
Sequence	MARLLLHFLSAYFVVLYVRVVDGAPISSCSQTPYPEVCNYFIGNYKPTAGIDEIQFPFRD RVLGVTMNQAKRLHLLVSAMDLSSSDERTKLAWADCLELYENTIDLVNRSINSISPAVMF DSQTWLSAAIANQQTCLDGFIDFNPSSDQFQSFPSMSISTSNFSKLLSNSLAINKAAVSA TSILSNNQAGGRRLLSNGFPTWVSAADRKLLQSSGAASRADIVVAHDGSGNYKTISEAVA ASVKLRSGTKRFVIYVKAGVYRENVEIKRKMKNIMIIGDGKDATIVTGNKNVQDGSTTFR SATFAVSGHGFIARDMTFENTAGPEKHQAVALRSSSDGSVFYGCSFKGYQDTLYVHTQRQ FYRSCDVYGTVDFIFGDAVAVLQNCNIYVRRPMSNQANVITAQGRSDQNENTGISIHNSR VMAAPDLRPVQSRFKTYLGRPWRKYSRTVFMKTSLDGLIHPEGWSPWKGDFGLSTLYYGE YMNTGSGASTRGRVKWRGYHVITSAAEADKFTVGRFLVGDSWIPTTGVPYASGL

Transcript Sequence

Transcript ID	VIT_01s0011g05380.t01
Transcript Infomation	cdna chromosome:12X:1:5015889:5018170:-1 gene:VIT_01s0011g05380 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase [Source:UniProtKB/TrEMBL;Acc:F6HFF6]
Sequence	TGCCAGCAAACTTGGGTCCTCATGGCTAGACTCTTATTGCATTTTTTGAGTGCTTATTTT GTGGTATTATACGTGAGGGTGGTGGATGGTGCTCCAATATCATCATGCAGTCAGACCCCA TATCCTGAAGTATGCAATTATTTCATTGGCAATTACAAGCCCACTGCAGGGATTGATGAA ATTCAGTTCCCATTTCGCGACAGGGTCCTTGGAGTCACAATGAACCAAGCCAAGCGACTC CACCTGCTGGTTTCAGCTATGGACTTGAGCTCGTCGGATGAGCGAACCAAGTTGGCTTGG GCTGATTGTTTGGAGCTTTATGAGAACACCATTGACCTGGTGAATCGTTCCATCAACTCT ATCAGTCCAGCGGTCATGTTTGACTCTCAAACATGGTTAAGTGCTGCAATTGCCAATCAG CAAACTTGTCTAGACGGATTTATTGATTTCAATCCATCTTCTGATCAGTTTCAATCCTTC CCATCTATGTCAATCTCAACCAGTAACTTCTCAAAGTTGCTTAGCAATTCGCTGGCAATA AACAAGGCAGCAGTTTCCGCAACAAGTATTCTATCTAACAATCAGGCTGGTGGCCGACGC TTGCTTTCTAATGGCTTCCCAACATGGGTTTCAGCTGCTGATAGAAAGCTTCTCCAGTCA TCTGGGGCAGCTTCAAGGGCTGATATTGTGGTAGCCCATGACGGGTCCGGTAATTACAAA ACCATTTCTGAGGCTGTTGCGGCGTCGGTTAAGCTAAGAAGCGGGACTAAGAGATTTGTT ATATACGTGAAAGCGGGTGTTTATAGAGAAAATGTGGAAATCAAGAGGAAAATGAAAAAT ATCATGATAATCGGAGATGGGAAAGATGCTACCATTGTCACCGGCAATAAGAATGTTCAA GATGGCTCCACAACTTTCCGTTCTGCCACTTTCGCTGTTTCGGGTCATGGCTTCATTGCT CGAGATATGACATTTGAAAACACGGCTGGACCTGAGAAACACCAAGCAGTTGCACTTCGC TCAAGCTCGGATGGTTCGGTTTTCTATGGTTGTAGCTTTAAAGGCTACCAAGACACCTTA TATGTGCACACACAACGCCAATTCTACCGCAGCTGCGATGTATATGGAACTGTGGACTTC ATCTTTGGAGATGCAGTTGCGGTTCTCCAGAACTGCAACATCTACGTGAGGAGACCCATG AGCAACCAAGCAAACGTCATCACCGCTCAGGGAAGATCCGATCAAAATGAAAATACTGGG ATTTCAATCCATAATTCGCGTGTCATGGCAGCTCCGGACTTGAGACCTGTTCAGAGTCGG TTTAAGACGTATCTCGGGCGGCCATGGCGTAAGTACTCAAGGACAGTTTTCATGAAGACT TCTCTAGACGGCTTGATCCATCCTGAGGGGTGGAGTCCATGGAAAGGAGACTTTGGTCTG TCAACTCTGTATTATGGTGAGTATATGAACACAGGAAGCGGTGCAAGTACTCGTGGCAGG GTGAAGTGGCGAGGATATCATGTTATTACTAGCGCAGCGGAGGCCGACAAATTTACAGTT GGCAGATTCTTGGTCGGAGATTCATGGATTCCGACCACTGGAGTTCCCTATGCTTCTGGG TTATGATATGTAGTTTTTCTGCCTAAATTCAAGTGAAGATAGTAATGATATTGTCATATA GTTTGTGTTAAGCTTTGTCGCGGTATCACACATGGATTCTAATAATAGGCTGATGTTTAT TCGGTCTCCA