Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g05330.t01
CDS Infomation

cds chromosome:12X:1:4934385:4948993:1 gene:VIT_01s0011g05330 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCACGCTTCAGACTTGGAGGAAGGCTTATGGTGCTCTCAAGGACTCCACCAAAGTC
GGCCTCGCCCACGTTAACAGCGATTTCGCGGATTTGGACGTTGCGGTCGTCAAAGCTACG
AATCACGTCGAATGTCCACCCAAGGAGAGGCACATCAGAAAAATTTTGGTCGCCACGTCT
GCGATCAGGCCACGAGCCGATGTTGCCTACTGCATTCATGCGCTCTCGAGGCGATTGGCG
AAGACGCATAATTGGACGGTGGCGTTAAAGACGCTCATAGTTATCCATAGAGCATTAAGG
GAGGGTGATCCTACTTTCCGGGAAGAACTTCTTAATTTCTCACAGAGGGGACGCATTCTC
CAACTGTCCAATTTCAAAGATGATTCAAGCCCTATTGCTTGGGATTGCTCTGCCTGGGTA
CGTACATATGCACTGTTTCTAGAGGAACGACTTGAATGTTTTAGGATTCTGAAGTATGAC
ATCGAGGCTGAGCGCCTCCCCAGACCTGCCCAAGGGCAGGAGAAGGGTTACAGCAGGACC
AGGGAATTGGATAGTGAAGAACTATTGGAACAGTTGCCTGCTTTGCAGCAGCTGCTACAT
CGTCTTATTGGATGCCGGCCGGAGGGAGCTGCTATTGGCAATTATGTGATACAGTATGCA
CTGGCTTTGGTACTCAAAGAGAGCTTTAAAATTTATTGTGCTATTAATGATGGAATTATC
AATCTTGTTGATAAGTTCTTTGAGATGCCCAGACATGAAGCTTTTAAAGCCCTTGAAATC
TATAAACGAGCTGGCCAGCAGGCTGGGAGCCTTTCTGATTTCTATGAAGTTTGCAAAGGT
TTGGAACTTGCTAGAAATTTCCAGTTTCCTGTTTTGAGAGAGCCTCCACAATCTTTTCTT
GCAACCATGGAAGATTATATAAGAGAGGCACCAAGGATGGTTTCTGTTCCAAATGAACCA
TTGCTTCAATTGACATACAAATCAGAAGATGCTCCTTCTCCTTCTGAAGACACAAAATTA
CCTAGTGATGATGAACCCAAGCTAGAACCTTCAGAAAATGTTGAAGTCTCCAGTGTCGAG
GTTGCTCATCCTCCCCCTCCTCTCCCGCCAAACAACTTGGATGATGGAGATCTACTGGGA
ATAAATGTTGTTGCTCATGATGCATCTGCAATTGAGGAAAGCAATGCTTTGGCTCTAGCC
ATAGTTCCATCTGGGTCTGCTGCTGCACCAACATTTGACTCCGGTGCTTTTCAAGCAAAA
GACTTTGATCCTACTGGATGGGAGCTTGCCCTGGTGACCACTCCAAGCAGCAATATTTCT
TCAGCGAATGAGAGGCAATTGGCTGGCGGACTGGACACACTCACTTTGACCAGTTTGTAT
GATGAAGGAGCATACAGAGCTGCCCAGCAGCCTGTTTATGGAGCACCAGCCCCGAATCCA
TTTGAGGTACATGATCCATTTGCTGTATCTAATGGTGTTGCTGCTCCTCCAGCAGTTCAA
ATGGCAGCGATGGCTCAACAGCAGCCCAATCCCTTTGCTCCATACCCAACCTACCAGCAG
CAGCAACAGCAACAGCAACAGCAACATTTGATGTTTGGTCCACCCAATCCTTTTGGGGAC
GCAGGGTTTGGGGCATTTCCTCGCAACACTACTACTGCTCACCCTCAAAATAACAATCCT
TTTGGAAGCACCAGCCTACTGTAA

Peptide Sequence

PEP ID

VIT_01s0011g05330.t01
PEP Infomation

pep chromosome:12X:1:4934385:4948993:1 gene:VIT_01s0011g05330 transcript:VIT_01s0011g05330.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MATLQTWRKAYGALKDSTKVGLAHVNSDFADLDVAVVKATNHVECPPKERHIRKILVATS
AIRPRADVAYCIHALSRRLAKTHNWTVALKTLIVIHRALREGDPTFREELLNFSQRGRIL
QLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRILKYDIEAERLPRPAQGQEKGYSRT
RELDSEELLEQLPALQQLLHRLIGCRPEGAAIGNYVIQYALALVLKESFKIYCAINDGII
NLVDKFFEMPRHEAFKALEIYKRAGQQAGSLSDFYEVCKGLELARNFQFPVLREPPQSFL
ATMEDYIREAPRMVSVPNEPLLQLTYKSEDAPSPSEDTKLPSDDEPKLEPSENVEVSSVE
VAHPPPPLPPNNLDDGDLLGINVVAHDASAIEESNALALAIVPSGSAAAPTFDSGAFQAK
DFDPTGWELALVTTPSSNISSANERQLAGGLDTLTLTSLYDEGAYRAAQQPVYGAPAPNP
FEVHDPFAVSNGVAAPPAVQMAAMAQQQPNPFAPYPTYQQQQQQQQQQHLMFGPPNPFGD
AGFGAFPRNTTTAHPQNNNPFGSTSLL

Transcript Sequence

Transcript ID

VIT_01s0011g05330.t01
Transcript Infomation

cdna chromosome:12X:1:4934385:4948993:1 gene:VIT_01s0011g05330 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCTCTCTTTCTCTCTCTCTCTATTAACTTTCTAGAGAGAGAAAGAGCCAATCACAAAAC
AATACCAAAATTTCAGTTCTTCTAGTTCTTTCTTTCTTTGATTATTGCCGAGCCCGAAAT
CGTCCCGTGTCTTTGCCCAAAGTCACAGACAGAGAATCAAGGTCTGAGGACCGCTTCATA
TAGAGATTTTTTTTTCTTTTTTTTGTGGAGAGAAAAGCAGCGGGGCACCGATCTCAACGG
CGATTGAGTAGAGGGGTGTGTACAGATGGCCACGCTTCAGACTTGGAGGAAGGCTTATGG
TGCTCTCAAGGACTCCACCAAAGTCGGCCTCGCCCACGTTAACAGCGATTTCGCGGATTT
GGACGTTGCGGTCGTCAAAGCTACGAATCACGTCGAATGTCCACCCAAGGAGAGGCACAT
CAGAAAAATTTTGGTCGCCACGTCTGCGATCAGGCCACGAGCCGATGTTGCCTACTGCAT
TCATGCGCTCTCGAGGCGATTGGCGAAGACGCATAATTGGACGGTGGCGTTAAAGACGCT
CATAGTTATCCATAGAGCATTAAGGGAGGGTGATCCTACTTTCCGGGAAGAACTTCTTAA
TTTCTCACAGAGGGGACGCATTCTCCAACTGTCCAATTTCAAAGATGATTCAAGCCCTAT
TGCTTGGGATTGCTCTGCCTGGGTACGTACATATGCACTGTTTCTAGAGGAACGACTTGA
ATGTTTTAGGATTCTGAAGTATGACATCGAGGCTGAGCGCCTCCCCAGACCTGCCCAAGG
GCAGGAGAAGGGTTACAGCAGGACCAGGGAATTGGATAGTGAAGAACTATTGGAACAGTT
GCCTGCTTTGCAGCAGCTGCTACATCGTCTTATTGGATGCCGGCCGGAGGGAGCTGCTAT
TGGCAATTATGTGATACAGTATGCACTGGCTTTGGTACTCAAAGAGAGCTTTAAAATTTA
TTGTGCTATTAATGATGGAATTATCAATCTTGTTGATAAGTTCTTTGAGATGCCCAGACA
TGAAGCTTTTAAAGCCCTTGAAATCTATAAACGAGCTGGCCAGCAGGCTGGGAGCCTTTC
TGATTTCTATGAAGTTTGCAAAGGTTTGGAACTTGCTAGAAATTTCCAGTTTCCTGTTTT
GAGAGAGCCTCCACAATCTTTTCTTGCAACCATGGAAGATTATATAAGAGAGGCACCAAG
GATGGTTTCTGTTCCAAATGAACCATTGCTTCAATTGACATACAAATCAGAAGATGCTCC
TTCTCCTTCTGAAGACACAAAATTACCTAGTGATGATGAACCCAAGCTAGAACCTTCAGA
AAATGTTGAAGTCTCCAGTGTCGAGGTTGCTCATCCTCCCCCTCCTCTCCCGCCAAACAA
CTTGGATGATGGAGATCTACTGGGAATAAATGTTGTTGCTCATGATGCATCTGCAATTGA
GGAAAGCAATGCTTTGGCTCTAGCCATAGTTCCATCTGGGTCTGCTGCTGCACCAACATT
TGACTCCGGTGCTTTTCAAGCAAAAGACTTTGATCCTACTGGATGGGAGCTTGCCCTGGT
GACCACTCCAAGCAGCAATATTTCTTCAGCGAATGAGAGGCAATTGGCTGGCGGACTGGA
CACACTCACTTTGACCAGTTTGTATGATGAAGGAGCATACAGAGCTGCCCAGCAGCCTGT
TTATGGAGCACCAGCCCCGAATCCATTTGAGGTACATGATCCATTTGCTGTATCTAATGG
TGTTGCTGCTCCTCCAGCAGTTCAAATGGCAGCGATGGCTCAACAGCAGCCCAATCCCTT
TGCTCCATACCCAACCTACCAGCAGCAGCAACAGCAACAGCAACAGCAACATTTGATGTT
TGGTCCACCCAATCCTTTTGGGGACGCAGGGTTTGGGGCATTTCCTCGCAACACTACTAC
TGCTCACCCTCAAAATAACAATCCTTTTGGAAGCACCAGCCTACTGTAACGACATTTGGA
ACATCTACAGAATGTAATCTTGGTGGTTCAGTTGATTTTCTTTTTGTATTTTGAGGCGAA
TGAAGCAGTGTGGTTTCTTGTATCCTTTCCACACCATTAGATCGATTATTGGTTTGGGGC
ATGGATCATTTGTTTGTCTGGATTATGAAAGATGAACTCAATGATTGGATACTGAAAGAT
GTATAATGAGTAAAGAGGAATGGTTGATTATA