Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g05280.t01
CDS Infomation

cds chromosome:12X:1:4912305:4918776:1 gene:VIT_01s0011g05280 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATGAAAGGCCAGTCACTCTTGAACCTCTGGTCAACGGCGAAGGCGACGTCACCAAT
GCTCACAGCAACCACGGTTGGCAGAAGGTCACCTACGCCAAGCGCAATCGGAAGCAGCAG
TCCAATAATTCAGATTCCGTTGGGAATTCTGAGAAGGTTCGTGTCAATGGAACGCTCGCC
ACCGGGGACAAGCCTAATGTGTTCCGATCACTCGAGCAGCAGGCGGAGGAGCGGCGCCGG
CGGGTCCTGGAAGCTCAGATGGTGGCTGCTGCTGCTGCCGATGATCATCAGGTTAGATCG
AAGTCCAAGCACAGGTCCGATGATGAAGATGACGACAGTGATGACGAAGTCGCGGCGGAG
AACGGGCAGGTCCAAGAGAAGAAGGTGAAGAAGCCTAAGGTGAAGAAGCCCAAGGTTACG
GTGGCTGATGCGGCCTCCAAGATTGATGCGGCTGATCTGGCGGCTTTTCTTGTTGATGTT
TCGGCATCGTACGAATCGAAAGAGGATATACTGCTAATGCGGTTTGCCGATTATTTTGGT
CGCGCATTTTCAGCTGTGAATTCTTCGCAGTTTCCTTGGATGAAGATGTTCAGGGAGTCA
ACGGTCGCCAAGATCGCAGATGTCCCTCTTTGTCATATTTCGGATGTTGTTTATAAGACA
TCAGTTGACTGGATCAACCAACGTTCCTCTGAGGCACTTGGTTCCTTTGTGTTATGGTCT
TTAGACTGCATTCTTTCTGACTTAGCAAGCCAGCAAGCTGTTACAAAAGGCTCCAAAAAG
GGCTTGCAGCATGCATCATCGAAATCTCAGGCTGCAATATTTGTAGTATTAGCAATGGTA
TTGAGGAGAAAGCCTGATGTGTTAATTAATTTGTTACCAACATTGAGGGAAAATTCGAAG
TATCAAGGACAGGATAAGCTTTCAGTTATAGTATGGATGGTGGCTCAGGCTTGTCAAGGA
GACCTGGCTGTAGGGTTGTATTTATGGGCACATAACATATTGCCTATAGTTAATGGCAAA
TCAAGTTGTAATCCACAGTCCAGGGATTTGGTTCTACAATTAGTGGAAAGAATTTTGTCT
GCCCCAAAAGCCCGCACTATTTTAGTAAATGGAGCTATTAGGAAGGGTGAGCGATTAGTG
CCTCCCTCAGCATTTGAGATATTGATGCGAGCTACCTTCCCTGCATCTTCAGCACGGATA
AAGGCAACTGAAAGGTTTGAGGCAGTATACCCCACTCTAAAAGAAGTAGCCCTAGCTGGT
CCTGCTGGAAGCAAAGCAATGAAGCAGGCTTCACAGCAGATACTGACTTTCACCATCAAA
GCAGCAGGAGAAAGTATCCCAGAATTATCCAATGAAACAAGTAGCATTTTTATCTGGTGT
TTGACTCAAAATCCTGATTGTTATAAGCAATGGGACAGGATCTATTTGGATAATCTAGAA
GCTAGTGTTGCAATTCTGAGAAAGCTTACCGAGCAATTGAAGGAGTTATCTCTGAAACAA
TCTTCTCTTGATCCTTTAAGGGAAACTCTCAAGAGTTTTAGGCACAAGAATGAGAAAGAA
TTGGCTGGTGGAGAGGATGCTGCTCATCAAGCACTCCTCAAGGATGCAGACAAGTACTGT
AAGGGAATTTTAGGAAGGGTATCTCGTGGCCATGGGTGCATGAAAAGTTTGACCTTTGCT
GTCATTGCCGCTGTAGCTGTTGGTGCTGCACTCATGTCCCCAAACATGGAATCCTGGGAT
TTGAAGAAGCTGTCTGTAGTGTTCAGCTCCTCACCATCCTTCTGA

Peptide Sequence

PEP ID

VIT_01s0011g05280.t01
PEP Infomation

pep chromosome:12X:1:4912305:4918776:1 gene:VIT_01s0011g05280 transcript:VIT_01s0011g05280.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDERPVTLEPLVNGEGDVTNAHSNHGWQKVTYAKRNRKQQSNNSDSVGNSEKVRVNGTLA
TGDKPNVFRSLEQQAEERRRRVLEAQMVAAAAADDHQVRSKSKHRSDDEDDDSDDEVAAE
NGQVQEKKVKKPKVKKPKVTVADAASKIDAADLAAFLVDVSASYESKEDILLMRFADYFG
RAFSAVNSSQFPWMKMFRESTVAKIADVPLCHISDVVYKTSVDWINQRSSEALGSFVLWS
LDCILSDLASQQAVTKGSKKGLQHASSKSQAAIFVVLAMVLRRKPDVLINLLPTLRENSK
YQGQDKLSVIVWMVAQACQGDLAVGLYLWAHNILPIVNGKSSCNPQSRDLVLQLVERILS
APKARTILVNGAIRKGERLVPPSAFEILMRATFPASSARIKATERFEAVYPTLKEVALAG
PAGSKAMKQASQQILTFTIKAAGESIPELSNETSSIFIWCLTQNPDCYKQWDRIYLDNLE
ASVAILRKLTEQLKELSLKQSSLDPLRETLKSFRHKNEKELAGGEDAAHQALLKDADKYC
KGILGRVSRGHGCMKSLTFAVIAAVAVGAALMSPNMESWDLKKLSVVFSSSPSF

Transcript Sequence

Transcript ID

VIT_01s0011g05280.t01
Transcript Infomation

cdna chromosome:12X:1:4912305:4918776:1 gene:VIT_01s0011g05280 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CGACGCCCGCCGCATGCTCTTGATGGCATCCCTGTAATTCCGGATATCGACAGAGGTCAA
ATTCTTCCGGTCAAACTTCTTATATACACACCCTTTTTCACATTTTCGCTCTTCCTCTAT
CCTTTCTCTTTCTCTGCGATTTCTCTCTCTGATATTTATATTTCTCTCTTTTCGGAGCCA
TGGATGAAAGGCCAGTCACTCTTGAACCTCTGGTCAACGGCGAAGGCGACGTCACCAATG
CTCACAGCAACCACGGTTGGCAGAAGGTCACCTACGCCAAGCGCAATCGGAAGCAGCAGT
CCAATAATTCAGATTCCGTTGGGAATTCTGAGAAGGTTCGTGTCAATGGAACGCTCGCCA
CCGGGGACAAGCCTAATGTGTTCCGATCACTCGAGCAGCAGGCGGAGGAGCGGCGCCGGC
GGGTCCTGGAAGCTCAGATGGTGGCTGCTGCTGCTGCCGATGATCATCAGGTTAGATCGA
AGTCCAAGCACAGGTCCGATGATGAAGATGACGACAGTGATGACGAAGTCGCGGCGGAGA
ACGGGCAGGTCCAAGAGAAGAAGGTGAAGAAGCCTAAGGTGAAGAAGCCCAAGGTTACGG
TGGCTGATGCGGCCTCCAAGATTGATGCGGCTGATCTGGCGGCTTTTCTTGTTGATGTTT
CGGCATCGTACGAATCGAAAGAGGATATACTGCTAATGCGGTTTGCCGATTATTTTGGTC
GCGCATTTTCAGCTGTGAATTCTTCGCAGTTTCCTTGGATGAAGATGTTCAGGGAGTCAA
CGGTCGCCAAGATCGCAGATGTCCCTCTTTGTCATATTTCGGATGTTGTTTATAAGACAT
CAGTTGACTGGATCAACCAACGTTCCTCTGAGGCACTTGGTTCCTTTGTGTTATGGTCTT
TAGACTGCATTCTTTCTGACTTAGCAAGCCAGCAAGCTGTTACAAAAGGCTCCAAAAAGG
GCTTGCAGCATGCATCATCGAAATCTCAGGCTGCAATATTTGTAGTATTAGCAATGGTAT
TGAGGAGAAAGCCTGATGTGTTAATTAATTTGTTACCAACATTGAGGGAAAATTCGAAGT
ATCAAGGACAGGATAAGCTTTCAGTTATAGTATGGATGGTGGCTCAGGCTTGTCAAGGAG
ACCTGGCTGTAGGGTTGTATTTATGGGCACATAACATATTGCCTATAGTTAATGGCAAAT
CAAGTTGTAATCCACAGTCCAGGGATTTGGTTCTACAATTAGTGGAAAGAATTTTGTCTG
CCCCAAAAGCCCGCACTATTTTAGTAAATGGAGCTATTAGGAAGGGTGAGCGATTAGTGC
CTCCCTCAGCATTTGAGATATTGATGCGAGCTACCTTCCCTGCATCTTCAGCACGGATAA
AGGCAACTGAAAGGTTTGAGGCAGTATACCCCACTCTAAAAGAAGTAGCCCTAGCTGGTC
CTGCTGGAAGCAAAGCAATGAAGCAGGCTTCACAGCAGATACTGACTTTCACCATCAAAG
CAGCAGGAGAAAGTATCCCAGAATTATCCAATGAAACAAGTAGCATTTTTATCTGGTGTT
TGACTCAAAATCCTGATTGTTATAAGCAATGGGACAGGATCTATTTGGATAATCTAGAAG
CTAGTGTTGCAATTCTGAGAAAGCTTACCGAGCAATTGAAGGAGTTATCTCTGAAACAAT
CTTCTCTTGATCCTTTAAGGGAAACTCTCAAGAGTTTTAGGCACAAGAATGAGAAAGAAT
TGGCTGGTGGAGAGGATGCTGCTCATCAAGCACTCCTCAAGGATGCAGACAAGTACTGTA
AGGGAATTTTAGGAAGGGTATCTCGTGGCCATGGGTGCATGAAAAGTTTGACCTTTGCTG
TCATTGCCGCTGTAGCTGTTGGTGCTGCACTCATGTCCCCAAACATGGAATCCTGGGATT
TGAAGAAGCTGTCTGTAGTGTTCAGCTCCTCACCATCCTTCTGATTGGAACACCGCAACA
GCAGCCAGTGATGCAAACTATCAATTTTTTTCTCTTTTAAATCCAAAAATTCAGCATCGG
GGAAGTAAACAAATTTTGCCATAATAATATGGCAGAGGATGAGTTATTTTCATGTAATTT
TATGTGGCTTGATAGGGTGCTGAAACTAGATGAGAGTTCAAAGTGAATTCCATGGAAGTT
GTTTCAATTTGTTGGGAGTCTCTTAGGACTGACTATTCATCTCTAACATCTGCAATACCA
GCAAAATGATATCAAGGAGAGATAGGGTCATGCGGTTATCTGGAAGGGAATTTGATGACA
CAAGGCCTTTTTTTTTTTTTTTTTTTTTCTGTAGTTTTGATTTGTGGTTGTTATGTAGTT
TTTTATATGCTTTGGATGCGGTAATCATGTGGTTTGGTAGTCTTTGTAGCTGCAATCATG
TTGAATAAGTTGGAAGTTTTATCTTATGTTTGGTGTACGATCCAGGAGGTTT