Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_01s0011g04770.t01
CDS Infomation	cds chromosome:12X:1:4353649:4357853:1 gene:VIT_01s0011g04770 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6HFJ0]
Sequence	ATGGACGCCGGCGGCGAGCTCTTGGCCCTCGTGAACGACGTCGTGGGGGTCTCCGTTGGG TTTGGAGGTGTGTTCAAGCGGGATTGCACGGATCTTGTCCGTAGGATCGCGCTTTTGACG CATTTGTTCGAGGAGATCAGAGATTTCGGGGCTGGTTTGAGGCCTTTGGATGTGTCGACT TCATCGGCGTCTCCCTTGACTTGCCTGTCTGAAGTAGCCAATGCTCTTCAGGCTGCTAAG CGCCTTCTGTCCGCCGCTGGAAATTTCAGTTCCGACGCCTTTTCTGATGGAGCTGCCAAG AAAATTACCTTCCAATTTCAATGTGTTACATGGAAATTGGAAAAAACATTGGGAAATCTA CCATATGATCATTTTGAAATCTCAGAGGAAGTTCGAGAACAGGTTGAATTGGTTAGAGCA CAGTTGAGAAGAGCAACAGAAAGATATGGTCCTCTGAATTCAAAAGTGGTATCTTGTGCT CTATCCCTGCCATTGGACAGAGAAATTCATCCTCGACAGTCTGGAAACAGGGTAACTGGA AGCTTTCATATTGAGAATTTGGGTAACATAAATCCAGAAGCTAAGGCCAAGATGGACAGT GTCCCAAAATGTAACGATTCTCACAGCATTACAGATCAGTTTGTTCCTGAATCTGGAAGG CTAAGTAACTCATCTGCATCAGCTGAGGCCCATCTATCGAATGACATTGATGCAGAAAAA GGTCACAAATCAGCTACAAAGAGTCTAGAGGAAATTAAGAAGCCTGACTCTGTTGTAATT CCCAATGATTTCCTATGCCCTATATCCCTCGAACTGATGAGGGATCCTGTTATTGTGGCC ACAGGACAGACCTATGAGAGATCTTACATACAGAGATGGATAGATTGTGGCAACTTAACA TGTCCAAAAACACAGCTTGAGCTTCAAAATCTGACACTCACCCCAAATTATGCTTTGAGA AGTTTAATTACTCAATGGTGCACTAAGAACAATATTGAGCAACCAACTGGATTAGTCAAT GGGAGGATAAAAAAGAGTGATGGGACATTTCGTGATGTCAGTGGAGATATAGCAGCCATT GAGGCATTGGTCCGCAAACTATCAAGCTGGTCCATTGAGGAGCGCAGAGCTGCTGCTACT GAAATCCGATCACTCTCCAAACGAAGCACGGATAACAGGATACTAATAGCAGAAGCAGGA GCCATTCCAGCTCTAGTCAACCTGTTAACAACAGATGATGTGGTAACTCAAGAAAATGCA GTTACTTCCATTCTAAACCTCTCCATTTATGAGAACAACAAGGGACTTATAATGCTTGCT GGTGCCATTCCTTCTATTGTCCTAGTCCTTAGAAGTGGAAGCATGGAGGCAAGGGAGAAT GCTGCCGCAACACTTTTTAGCTTGTCAGTTGCAGATGAGAACAAAATTATAATAGGTGCC TCTGGAGCAATGCCGGCTTTGGTAGAACTGCTCCAAAACGGAAGCACGAGAGGAAAGAAA GATGCTGCAACAGCACTTTTCAATTTATGCATTTATCAAGGAAACAAGAGCAGGGCTGTG AAGGCAGGGATCATTACTGCATTATCAAAGATGCTCACAGATTTAAACAATTGCATGGTG GATGAAGCTCTCACAATACTATCCGTTCTTTCTAGCCACCAAGAAGCTAAAATTTCCATA GTAAAGGCTAGCATCATACCAGTATTGATAGATCTTTTGAGGACAGGTCTGCCCCGCAAC AAAGAGAATGCTGCTGCCATTTTGCTTTCCCTGTGCAAGAGAGATAATGAGAATCTTGCC TGTATTAGTAGGCTTGGCGCTGTCATACCCCTTGCTGAGCTTGCTAAGAGCGGCACAGAG AGGGCCAAGCGCAAGGCTACTTCATTGTTGGAGCATCTTCAAAGATTACAGCAACTCTGA

Peptide Sequence

PEP ID	VIT_01s0011g04770.t01
PEP Infomation	pep chromosome:12X:1:4353649:4357853:1 gene:VIT_01s0011g04770 transcript:VIT_01s0011g04770.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6HFJ0]
Sequence	MDAGGELLALVNDVVGVSVGFGGVFKRDCTDLVRRIALLTHLFEEIRDFGAGLRPLDVST SSASPLTCLSEVANALQAAKRLLSAAGNFSSDAFSDGAAKKITFQFQCVTWKLEKTLGNL PYDHFEISEEVREQVELVRAQLRRATERYGPLNSKVVSCALSLPLDREIHPRQSGNRVTG SFHIENLGNINPEAKAKMDSVPKCNDSHSITDQFVPESGRLSNSSASAEAHLSNDIDAEK GHKSATKSLEEIKKPDSVVIPNDFLCPISLELMRDPVIVATGQTYERSYIQRWIDCGNLT CPKTQLELQNLTLTPNYALRSLITQWCTKNNIEQPTGLVNGRIKKSDGTFRDVSGDIAAI EALVRKLSSWSIEERRAAATEIRSLSKRSTDNRILIAEAGAIPALVNLLTTDDVVTQENA VTSILNLSIYENNKGLIMLAGAIPSIVLVLRSGSMEARENAAATLFSLSVADENKIIIGA SGAMPALVELLQNGSTRGKKDAATALFNLCIYQGNKSRAVKAGIITALSKMLTDLNNCMV DEALTILSVLSSHQEAKISIVKASIIPVLIDLLRTGLPRNKENAAAILLSLCKRDNENLA CISRLGAVIPLAELAKSGTERAKRKATSLLEHLQRLQQL

Transcript Sequence

Transcript ID	VIT_01s0011g04770.t01
Transcript Infomation	cdna chromosome:12X:1:4353649:4357853:1 gene:VIT_01s0011g04770 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6HFJ0]
Sequence	CCACGTGCTCCCTCCACGTGGCAATGGACGCCGGCGGCGAGCTCTTGGCCCTCGTGAACG ACGTCGTGGGGGTCTCCGTTGGGTTTGGAGGTGTGTTCAAGCGGGATTGCACGGATCTTG TCCGTAGGATCGCGCTTTTGACGCATTTGTTCGAGGAGATCAGAGATTTCGGGGCTGGTT TGAGGCCTTTGGATGTGTCGACTTCATCGGCGTCTCCCTTGACTTGCCTGTCTGAAGTAG CCAATGCTCTTCAGGCTGCTAAGCGCCTTCTGTCCGCCGCTGGAAATTTCAGTTCCGACG CCTTTTCTGATGGAGCTGCCAAGAAAATTACCTTCCAATTTCAATGTGTTACATGGAAAT TGGAAAAAACATTGGGAAATCTACCATATGATCATTTTGAAATCTCAGAGGAAGTTCGAG AACAGGTTGAATTGGTTAGAGCACAGTTGAGAAGAGCAACAGAAAGATATGGTCCTCTGA ATTCAAAAGTGGTATCTTGTGCTCTATCCCTGCCATTGGACAGAGAAATTCATCCTCGAC AGTCTGGAAACAGGGTAACTGGAAGCTTTCATATTGAGAATTTGGGTAACATAAATCCAG AAGCTAAGGCCAAGATGGACAGTGTCCCAAAATGTAACGATTCTCACAGCATTACAGATC AGTTTGTTCCTGAATCTGGAAGGCTAAGTAACTCATCTGCATCAGCTGAGGCCCATCTAT CGAATGACATTGATGCAGAAAAAGGTCACAAATCAGCTACAAAGAGTCTAGAGGAAATTA AGAAGCCTGACTCTGTTGTAATTCCCAATGATTTCCTATGCCCTATATCCCTCGAACTGA TGAGGGATCCTGTTATTGTGGCCACAGGACAGACCTATGAGAGATCTTACATACAGAGAT GGATAGATTGTGGCAACTTAACATGTCCAAAAACACAGCTTGAGCTTCAAAATCTGACAC TCACCCCAAATTATGCTTTGAGAAGTTTAATTACTCAATGGTGCACTAAGAACAATATTG AGCAACCAACTGGATTAGTCAATGGGAGGATAAAAAAGAGTGATGGGACATTTCGTGATG TCAGTGGAGATATAGCAGCCATTGAGGCATTGGTCCGCAAACTATCAAGCTGGTCCATTG AGGAGCGCAGAGCTGCTGCTACTGAAATCCGATCACTCTCCAAACGAAGCACGGATAACA GGATACTAATAGCAGAAGCAGGAGCCATTCCAGCTCTAGTCAACCTGTTAACAACAGATG ATGTGGTAACTCAAGAAAATGCAGTTACTTCCATTCTAAACCTCTCCATTTATGAGAACA ACAAGGGACTTATAATGCTTGCTGGTGCCATTCCTTCTATTGTCCTAGTCCTTAGAAGTG GAAGCATGGAGGCAAGGGAGAATGCTGCCGCAACACTTTTTAGCTTGTCAGTTGCAGATG AGAACAAAATTATAATAGGTGCCTCTGGAGCAATGCCGGCTTTGGTAGAACTGCTCCAAA ACGGAAGCACGAGAGGAAAGAAAGATGCTGCAACAGCACTTTTCAATTTATGCATTTATC AAGGAAACAAGAGCAGGGCTGTGAAGGCAGGGATCATTACTGCATTATCAAAGATGCTCA CAGATTTAAACAATTGCATGGTGGATGAAGCTCTCACAATACTATCCGTTCTTTCTAGCC ACCAAGAAGCTAAAATTTCCATAGTAAAGGCTAGCATCATACCAGTATTGATAGATCTTT TGAGGACAGGTCTGCCCCGCAACAAAGAGAATGCTGCTGCCATTTTGCTTTCCCTGTGCA AGAGAGATAATGAGAATCTTGCCTGTATTAGTAGGCTTGGCGCTGTCATACCCCTTGCTG AGCTTGCTAAGAGCGGCACAGAGAGGGCCAAGCGCAAGGCTACTTCATTGTTGGAGCATC TTCAAAGATTACAGCAACTCTGACAAATGTACTCATACCATGATATTCTTGTATTTTTTC TCTTTCTTGCTTACACTTCCTATTATTTGTCAATGAATGTTACTCTCTATTTTGAGGGTG AAA