Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g04560.t01
CDS Infomation

cds chromosome:12X:1:4119193:4124629:1 gene:VIT_01s0011g04560 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein-lysine N-methyltransferase VIT_01s0011g04560 [Source:UniProtKB/TrEMBL;Acc:F6HFK4]
Sequence

ATGGCCGGAATCAAGCTCTCGCCGGAGGATTCTGAGTTCTCCCAGCCCTCCCGAGCTCCG
GCCTCCGCTGACCTTGCATCCGTCGTCTCTGACGACGATCGTTCTGTCGCTGCCGATTCT
TGGTCGATTAAGAGCGACTACGGGAGCACTATGGATGACGATCAGCGTCATGCAGATGCC
GCCGAGGTGCTCTCCTCCACTGTCCTAGGCTCTGCCGATTACAGTTCTGACAAGGAAGAG
CCATATGTTGAAGTTGACAACTCAATGCTAGGTTTACAGAGTCATTGGGATGCAACATAT
GCAGGTGACTTGGCAAACTTTCACGTGCATGGCCATGCTGGTGAAGTTTGGTTTGGTGCT
GTAGTCATGAGTGTGGTTGCATCCTGGACAAAGAACCTCTGTATAGACATTTCTCAAGGT
TGTATGCCAAATCTCAGTGATTTCAAATCCAAGTCATTTGAGCAATTTGAAAAAGATTTG
GCTAGATGGAGAGTGCTTGATGTTGGAATTGGCAACGGTCTACTTCTTCAAGAACTTGCT
AAGCAAGGGTTCTCTGATTTGACTGGAATTGATTATAGTGAAGGTGCTATTAACCTTGCT
CAGAACCTTGCTGATCGTGATGGATTCACCAGCATTAACTTCTTGGTTGATGACAATCTT
GAGACAAAATTGGAGAGGCAGTTCCAACTTGTTATGGATAAAGGAACTTTAGATGCTATT
GGGTTGCATCCTGATGATCCCATCAAAAGGATTATGTATTGGGATTCTATCTCAAGGTTG
GTGGTGCCTGGTGGTATATTGGTGATTACATCATGTAAGAGTACAAAAGATGAATTGATG
CAAGAGGTGGATGCTTTCAACCGAAGAAGGCTCAGTTCCTCCCAGGAGCCAGAGATCCCG
AAGGACCAAGATGCACCCAGAGATTATCCATTTAAATACCTGAGTCATTTTCAATCTGAT
AGTACATCAGTGTTAGGAGTGGTAGGCTCACTAGTTGTCACTGTTGCATTTCTTCGAGGC
TAA

Peptide Sequence

PEP ID

VIT_01s0011g04560.t01
PEP Infomation

pep chromosome:12X:1:4119193:4124629:1 gene:VIT_01s0011g04560 transcript:VIT_01s0011g04560.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein-lysine N-methyltransferase VIT_01s0011g04560 [Source:UniProtKB/TrEMBL;Acc:F6HFK4]
Sequence

MAGIKLSPEDSEFSQPSRAPASADLASVVSDDDRSVAADSWSIKSDYGSTMDDDQRHADA
AEVLSSTVLGSADYSSDKEEPYVEVDNSMLGLQSHWDATYAGDLANFHVHGHAGEVWFGA
VVMSVVASWTKNLCIDISQGCMPNLSDFKSKSFEQFEKDLARWRVLDVGIGNGLLLQELA
KQGFSDLTGIDYSEGAINLAQNLADRDGFTSINFLVDDNLETKLERQFQLVMDKGTLDAI
GLHPDDPIKRIMYWDSISRLVVPGGILVITSCKSTKDELMQEVDAFNRRRLSSSQEPEIP
KDQDAPRDYPFKYLSHFQSDSTSVLGVVGSLVVTVAFLRG

Transcript Sequence

Transcript ID

VIT_01s0011g04560.t01
Transcript Infomation

cdna chromosome:12X:1:4119193:4124629:1 gene:VIT_01s0011g04560 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein-lysine N-methyltransferase VIT_01s0011g04560 [Source:UniProtKB/TrEMBL;Acc:F6HFK4]
Sequence

TTCTCACTCCATTTCTCTGCATTCGCTCACCTTCCATCACCTCCATGGCCGGAATCAAGC
TCTCGCCGGAGGATTCTGAGTTCTCCCAGCCCTCCCGAGCTCCGGCCTCCGCTGACCTTG
CATCCGTCGTCTCTGACGACGATCGTTCTGTCGCTGCCGATTCTTGGTCGATTAAGAGCG
ACTACGGGAGCACTATGGATGACGATCAGCGTCATGCAGATGCCGCCGAGGTGCTCTCCT
CCACTGTCCTAGGCTCTGCCGATTACAGTTCTGACAAGGAAGAGCCATATGTTGAAGTTG
ACAACTCAATGCTAGGTTTACAGAGTCATTGGGATGCAACATATGCAGGTGACTTGGCAA
ACTTTCACGTGCATGGCCATGCTGGTGAAGTTTGGTTTGGTGCTGTAGTCATGAGTGTGG
TTGCATCCTGGACAAAGAACCTCTGTATAGACATTTCTCAAGGTTGTATGCCAAATCTCA
GTGATTTCAAATCCAAGTCATTTGAGCAATTTGAAAAAGATTTGGCTAGATGGAGAGTGC
TTGATGTTGGAATTGGCAACGGTCTACTTCTTCAAGAACTTGCTAAGCAAGGGTTCTCTG
ATTTGACTGGAATTGATTATAGTGAAGGTGCTATTAACCTTGCTCAGAACCTTGCTGATC
GTGATGGATTCACCAGCATTAACTTCTTGGTTGATGACAATCTTGAGACAAAATTGGAGA
GGCAGTTCCAACTTGTTATGGATAAAGGAACTTTAGATGCTATTGGGTTGCATCCTGATG
ATCCCATCAAAAGGATTATGTATTGGGATTCTATCTCAAGGTTGGTGGTGCCTGGTGGTA
TATTGGTGATTACATCATGTAAGAGTACAAAAGATGAATTGATGCAAGAGGTGGATGCTT
TCAACCGAAGAAGGCTCAGTTCCTCCCAGGAGCCAGAGATCCCGAAGGACCAAGATGCAC
CCAGAGATTATCCATTTAAATACCTGAGTCATTTTCAATCTGATAGTACATCAGTGTTAG
GAGTGGTAGGCTCACTAGTTGTCACTGTTGCATTTCTTCGAGGCTAAAAGTGTTCTTACA
CTTCAATTTTATCAAAGTCAGTCTTGACATTTCACGTTAGAGTGAATGCCGTTGTTTTAT
TTCATCTAGGGCACTGTTTTCCTGTTAGAAAGAAATGTGGAATGTGCTTACGTCCAGAAA
AGAACCTGCTTACATTTGGGAAATTCTGTACTTTTTTACTCTATATTCTTTTTTTATGTA
TAAAGAAGAACAAAT