Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g04420.t01
CDS Infomation

cds chromosome:12X:1:4016428:4021157:-1 gene:VIT_01s0011g04420 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGTAGAGCCAAGAGAGAGCAGCTGAGTCGAACTCTGAATTCCCACCTCAACAACATC
CACGAGACCTTCCAGGTTTTGGATCAAACATCTTCACTTCCTCTTGACAAAGTCAGTTGG
GATGACGTTATACAGATGGGAGAGCAAGTCTACAAACAAGCTACTATTGTTGGAATGCTT
TGGACCGGGGAAGCACCTGAAGTTTCAGCACTGGAAGGGAATATGGAAGCATACTTCAAT
ATGCTACAGGGTTTCCTTTTTCTCTCCCATGGAAGTACAGTGGGTGCAGGACCTACTCTT
TCTTCCAGTATTCATGCATCGGTGAAGCAAGTTGTGGATTCTAGTTTTCGGTTATTGAAA
GAGTCTGTCTCTTCCTATGGATCCCGCAACAGAGACCAGAAACTCTCAATCCCACAGTTA
GTGGGTGCGGTTTGGGAGGCCTGTTCTGCTCTTAAGAAGACTCCTGCCACAAATATCACA
GCCATTGGACGAACAATGACACAGGTTGCAGTTTCCATGAAGGATGTCCTTCGCGAGATG
AAGGAGCTGAAGCCAGCTTCCTCAGACCCAACTGATGAAACTTCTGATGAGGCTTCCAAC
AAAGCAGAAAGCATACCTGAAAATGATGATAATTCAAGTGAAGGTGATCTTGGCAATGAC
CTGTCGCCTGAGGAAATGAAAATTGCAGTATCAGTGATATCAGTTGTCACTGAAATTCTT
GCAGTCATAAAGGAGCTTATCCGCTGCATTACAGGCTTGGTTAAACAGGAAGATGCAAAC
AAGAGTAGTAATTTTGTGGATTCGTTGGAGAAGTTATTGAAGCTCTGCCAAGGAATTGGT
GTACAGGTTGATGAGCTCGGTGCTTGTCTTTACCCCCCACAAGAGATTCCTGCCATGAAG
GCCGCCGCAGAGAAAATATCTGGCAGTGTTGATGAAATACAGGCAGAGATAGAAAATCTT
GGAGGCACCACAGAAACCTTCATTCAGGCATGCAATGTTTTGAGGAGCTCTCTGGGACAG
CTAAATTCCCTAGTGGGTGATTCCAGTACTGCTGATCTTGTACCTGAAATGCAGAATCTT
GCTGTGACAAGTTAA

Peptide Sequence

PEP ID

VIT_01s0011g04420.t01
PEP Infomation

pep chromosome:12X:1:4016428:4021157:-1 gene:VIT_01s0011g04420 transcript:VIT_01s0011g04420.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSRAKREQLSRTLNSHLNNIHETFQVLDQTSSLPLDKVSWDDVIQMGEQVYKQATIVGML
WTGEAPEVSALEGNMEAYFNMLQGFLFLSHGSTVGAGPTLSSSIHASVKQVVDSSFRLLK
ESVSSYGSRNRDQKLSIPQLVGAVWEACSALKKTPATNITAIGRTMTQVAVSMKDVLREM
KELKPASSDPTDETSDEASNKAESIPENDDNSSEGDLGNDLSPEEMKIAVSVISVVTEIL
AVIKELIRCITGLVKQEDANKSSNFVDSLEKLLKLCQGIGVQVDELGACLYPPQEIPAMK
AAAEKISGSVDEIQAEIENLGGTTETFIQACNVLRSSLGQLNSLVGDSSTADLVPEMQNL
AVTS

Transcript Sequence

Transcript ID

VIT_01s0011g04420.t01
Transcript Infomation

cdna chromosome:12X:1:4016428:4021157:-1 gene:VIT_01s0011g04420 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAGAGGGACGATGAGTAGAGCCAAGAGAGAGCAGCTGAGTCGAACTCTGAATTCCCACC
TCAACAACATCCACGAGACCTTCCAGGTTTTGGATCAAACATCTTCACTTCCTCTTGACA
AAGTCAGTTGGGATGACGTTATACAGATGGGAGAGCAAGTCTACAAACAAGCTACTATTG
TTGGAATGCTTTGGACCGGGGAAGCACCTGAAGTTTCAGCACTGGAAGGGAATATGGAAG
CATACTTCAATATGCTACAGGGTTTCCTTTTTCTCTCCCATGGAAGTACAGTGGGTGCAG
GACCTACTCTTTCTTCCAGTATTCATGCATCGGTGAAGCAAGTTGTGGATTCTAGTTTTC
GGTTATTGAAAGAGTCTGTCTCTTCCTATGGATCCCGCAACAGAGACCAGAAACTCTCAA
TCCCACAGTTAGTGGGTGCGGTTTGGGAGGCCTGTTCTGCTCTTAAGAAGACTCCTGCCA
CAAATATCACAGCCATTGGACGAACAATGACACAGGTTGCAGTTTCCATGAAGGATGTCC
TTCGCGAGATGAAGGAGCTGAAGCCAGCTTCCTCAGACCCAACTGATGAAACTTCTGATG
AGGCTTCCAACAAAGCAGAAAGCATACCTGAAAATGATGATAATTCAAGTGAAGGTGATC
TTGGCAATGACCTGTCGCCTGAGGAAATGAAAATTGCAGTATCAGTGATATCAGTTGTCA
CTGAAATTCTTGCAGTCATAAAGGAGCTTATCCGCTGCATTACAGGCTTGGTTAAACAGG
AAGATGCAAACAAGAGTAGTAATTTTGTGGATTCGTTGGAGAAGTTATTGAAGCTCTGCC
AAGGAATTGGTGTACAGGTTGATGAGCTCGGTGCTTGTCTTTACCCCCCACAAGAGATTC
CTGCCATGAAGGCCGCCGCAGAGAAAATATCTGGCAGTGTTGATGAAATACAGGCAGAGA
TAGAAAATCTTGGAGGCACCACAGAAACCTTCATTCAGGCATGCAATGTTTTGAGGAGCT
CTCTGGGACAGCTAAATTCCCTAGTGGGTGATTCCAGTACTGCTGATCTTGTACCTGAAA
TGCAGAATCTTGCTGTGACAAGTTAAAGAGAGAGAGGGAGAGGGAGAGAGATGAAGAAAG
AGAATGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTACTTTATTGTTTG
ATATTTTGATTTACTTAATTCAACTCAGCAAAGTTAAGCCCTTTTTACTCTGAAAGATAA
TCTGGATAAAAGCCAAATTGTTTGGTTTCTTATACTTGTTTTACTTAAAACTTTTGGAC