Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g04410.t01
CDS Infomation

cds chromosome:12X:1:4011142:4016181:1 gene:VIT_01s0011g04410 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAAGCACCAGTGGTTTCTTCTCTCTTCTTCGCATCAACAACTGCTGTTTTTTTAAT
CAGCTCCACCCTATCAGACACCACAAACCTCCCCTGCAAATCCACCGCAGGAGAGCACCG
GGCTTTGGGCCATCTCAGAGGCTCCGCCTTAGAAATTTCAGCACGCTTGTTTGTTCTGCC
GTTGAAGATGATGCGAGGGATAAGCAGCAGCAACTGGGTGGCGGTGTTGGGTCAATTGTT
GAGGAGAGGCCTGTGGCTGAGGACTCAGGTGAAGATACACTGCAAAACGTTGACCAAGAT
AAAAAAGAAAATGGTCTTTATGATTTTCTTTATCCCAGTAAAGAGCTCCTGCCAGATGAT
AAAGAAATGTCCATATTTGATCATCTAGAGGAGCTACGTCAGAGAATATTTGTGTCAGTT
TTGGCAGTTGGAGCTGCCATGTTGGGATCTTTTGCATTTTCAAAAGAACTGGTTATGATT
CTTGAAGCTCCTGTTAAAGAACAGGGTGTTCGATTTCTGCAACTGGCTCCTGGAGAGTTT
TTCTTTACAACTTTGAAGGTATCAGGATACTGTGGTCTTCTCTTGGGGAGCCCCATCATC
TTATATGAAATTATAGCTTTTGTTCTTCCAGGTTTAACAAAGGCAGAGAGAATGTTTCTG
GGGCCAATTGTATTAGGGTCCTCAGTACTTTTCTACGCTGGTATCATCTTCTCCTACTCG
ATTCTCACCCCGGCAGCCTTGAATTTCTTTGTTAATTACGCAGAAGGAGCTGTGGAATCT
TTGTGGTCTATTGATCAATACTTTGAGTTTGTCTTTGTGCTCATGTTCAGCACTGGTTTG
TCTTTTCAGGTTCCAGTCATACAACTTCTACTGGGACAAGTTGGTGTAGTGTCAGGAGAT
CAAATGCTGTCAATTTGGAGATATGTCGTGGTTGGTGCTGTTGTGGCTGCTGCAGTTCTT
ACTCCATCAACTGATCCTCTAACTCAGGTGCTTCTGGCAGGGCCCCTTTTGGGTCTCTAC
TTGGGTGGGGCATGGATGGTAAAGCTTATGGGGCGGTGA

Peptide Sequence

PEP ID

VIT_01s0011g04410.t01
PEP Infomation

pep chromosome:12X:1:4011142:4016181:1 gene:VIT_01s0011g04410 transcript:VIT_01s0011g04410.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGSTSGFFSLLRINNCCFFNQLHPIRHHKPPLQIHRRRAPGFGPSQRLRLRNFSTLVCSA
VEDDARDKQQQLGGGVGSIVEERPVAEDSGEDTLQNVDQDKKENGLYDFLYPSKELLPDD
KEMSIFDHLEELRQRIFVSVLAVGAAMLGSFAFSKELVMILEAPVKEQGVRFLQLAPGEF
FFTTLKVSGYCGLLLGSPIILYEIIAFVLPGLTKAERMFLGPIVLGSSVLFYAGIIFSYS
ILTPAALNFFVNYAEGAVESLWSIDQYFEFVFVLMFSTGLSFQVPVIQLLLGQVGVVSGD
QMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAGPLLGLYLGGAWMVKLMGR

Transcript Sequence

Transcript ID

VIT_01s0011g04410.t01
Transcript Infomation

cdna chromosome:12X:1:4011142:4016181:1 gene:VIT_01s0011g04410 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAGGTTTAGAAGCAAGCCAGAAGCCAAACGGGGGTGATACAACCCCGTCCTTTCCAAAT
ATCGGCGGCCGAGGGAGTTTAGAGCCAATCGTCCAGCTGATATCGTTTGATATTTAGTAT
TACCACCCAGAAATCCAGTATCCCCTCCCCAGTAGAGATGGGAAGCACCAGTGGTTTCTT
CTCTCTTCTTCGCATCAACAACTGCTGTTTTTTTAATCAGCTCCACCCTATCAGACACCA
CAAACCTCCCCTGCAAATCCACCGCAGGAGAGCACCGGGCTTTGGGCCATCTCAGAGGCT
CCGCCTTAGAAATTTCAGCACGCTTGTTTGTTCTGCCGTTGAAGATGATGCGAGGGATAA
GCAGCAGCAACTGGGTGGCGGTGTTGGGTCAATTGTTGAGGAGAGGCCTGTGGCTGAGGA
CTCAGGTGAAGATACACTGCAAAACGTTGACCAAGATAAAAAAGAAAATGGTCTTTATGA
TTTTCTTTATCCCAGTAAAGAGCTCCTGCCAGATGATAAAGAAATGTCCATATTTGATCA
TCTAGAGGAGCTACGTCAGAGAATATTTGTGTCAGTTTTGGCAGTTGGAGCTGCCATGTT
GGGATCTTTTGCATTTTCAAAAGAACTGGTTATGATTCTTGAAGCTCCTGTTAAAGAACA
GGGTGTTCGATTTCTGCAACTGGCTCCTGGAGAGTTTTTCTTTACAACTTTGAAGGTATC
AGGATACTGTGGTCTTCTCTTGGGGAGCCCCATCATCTTATATGAAATTATAGCTTTTGT
TCTTCCAGGTTTAACAAAGGCAGAGAGAATGTTTCTGGGGCCAATTGTATTAGGGTCCTC
AGTACTTTTCTACGCTGGTATCATCTTCTCCTACTCGATTCTCACCCCGGCAGCCTTGAA
TTTCTTTGTTAATTACGCAGAAGGAGCTGTGGAATCTTTGTGGTCTATTGATCAATACTT
TGAGTTTGTCTTTGTGCTCATGTTCAGCACTGGTTTGTCTTTTCAGGTTCCAGTCATACA
ACTTCTACTGGGACAAGTTGGTGTAGTGTCAGGAGATCAAATGCTGTCAATTTGGAGATA
TGTCGTGGTTGGTGCTGTTGTGGCTGCTGCAGTTCTTACTCCATCAACTGATCCTCTAAC
TCAGGTGCTTCTGGCAGGGCCCCTTTTGGGTCTCTACTTGGGTGGGGCATGGATGGTAAA
GCTTATGGGGCGGTGACTGGTTTCTGTTGGCTTGCATCAATACATGGATTTGTGCTTGGC
CAGTTTTATGCAATGTATGACATATGTAAATCCCAAAAGGATGTACCATAAAATGATATG
AGCACAGAATGGAAGGAGGATTCTTTATCTCGTTTCAATCTCATAGTTTATTGTAGTTAA
TTTTTGTAGCAGATTATTTGTCCATGTGCAATAAAA