Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_01s0011g04400.t01
CDS Infomation

cds chromosome:12X:1:4004109:4010867:-1 gene:VIT_01s0011g04400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Origin of replication complex subunit 4 [Source:UniProtKB/TrEMBL;Acc:F6HFL3]
Sequence

ATGAAAGGGCGAGAAAATCCAGCAGAGGATGCCTTAATTCTTCTCAGAAGTAGAATTTGT
AACCCTAATTTCGTCTTCACACCATTTTCCGATTCACCCGACAGCAATTACAGCAAGTTG
AAATTCATTATATCAAGCTCAGTGACCGAGGCATGTAACAATTCAATCCTTCTTCTTGGT
CCTCGTGGTTCTGGAAAAACGGCGGTGTTGGAGCTTGTTATCAGAGATCTATTGGCAGAA
CATGCTGATATGATATCAGTGATCAGATTGAATGGGCTTTTGCACAGTGATGACAATTGT
GCAGTCAAGGAAATTGCTAGACAATTGTGTGTGGAGCATCAGTTGTTGTTCTCAAAAATG
GCATCATTTGACGATAATTCCCAGTTCATGATAGCTATGTTACGGGAGTGTGGATTAGCT
CACAAGACAATCATTTTTGTATTGGATGAGTTTGACTTCTTCACTCAGGCAAGATTACCT
CTCTCTCATGGGAAACAACGATTACTTTATAGCTTGTTGGATGCAATGCAATCTGTGACG
TCACAAGCAGTTGTCATTGGTGTCAGTTGCAGACTAGATGCAGATCAACTCTTGGAAAAA
AGAGTAAGATCTCGTTTTTCACATAGAAAGGTGTTGTTTCTTCCACCCTCAAAGGAAGAT
CTACAAAGATTGTTAGAGCACATTTTTTCTTTGCCAGTAGACACGAGCCTTCCAAATGAC
TATGCTGTTGAGTTCAATATGAAACTCCATCATATATTGGCAGATGAGAGATTTAAAGAA
ATCATTAATACCTTGTTGAATTCTGATTCCACTGTCAAACATTTGTTGAGGTTTCTATTT
TATGCTGTTTGTCATATGGATTTGGAATCTGGGTTCCTGTCACTTGATAACTTCAGAACA
GCAATGTCAAGCATCCAAAGGCAGCCAAAGATGGAATATTTACAAGATTGCTCCATTTTG
GAACTCTATATTTTGGTGTGCATGAAGAGGTTGGAAGTCAAAGAGCAAAACTCATACAAT
TTCAATTCTGTAATGAAAGAATACAAAGGCATACATGATGCATACCAGACATCCGATTAT
TATGCACGGAATGTATGCTTACGGGCTTTTGAACACCTTGTACAACGTGAATTAATCTGT
TTTATGGATAATAGGGGAAACAATCAATCTATAGAATTTCGTGCAGTGAAGCTACTAATC
TCATCACATGAACTCTATCAGGGATTGAAATCATATCGCTCTTGTCCTTGTGTGAGTCAT
TCTGCGGAAGCTGGTGGACCAATGAAAGTTATAGATGGCCGGTCAGCTTTGTGGGTATCA
GAGGAGAAGGTGAAGGTTGCTGTTTGTAGTAATTTCTTCTGGATGTTTTAA

Peptide Sequence

PEP ID

VIT_01s0011g04400.t01
PEP Infomation

pep chromosome:12X:1:4004109:4010867:-1 gene:VIT_01s0011g04400 transcript:VIT_01s0011g04400.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Origin of replication complex subunit 4 [Source:UniProtKB/TrEMBL;Acc:F6HFL3]
Sequence

MKGRENPAEDALILLRSRICNPNFVFTPFSDSPDSNYSKLKFIISSSVTEACNNSILLLG
PRGSGKTAVLELVIRDLLAEHADMISVIRLNGLLHSDDNCAVKEIARQLCVEHQLLFSKM
ASFDDNSQFMIAMLRECGLAHKTIIFVLDEFDFFTQARLPLSHGKQRLLYSLLDAMQSVT
SQAVVIGVSCRLDADQLLEKRVRSRFSHRKVLFLPPSKEDLQRLLEHIFSLPVDTSLPND
YAVEFNMKLHHILADERFKEIINTLLNSDSTVKHLLRFLFYAVCHMDLESGFLSLDNFRT
AMSSIQRQPKMEYLQDCSILELYILVCMKRLEVKEQNSYNFNSVMKEYKGIHDAYQTSDY
YARNVCLRAFEHLVQRELICFMDNRGNNQSIEFRAVKLLISSHELYQGLKSYRSCPCVSH
SAEAGGPMKVIDGRSALWVSEEKVKVAVCSNFFWMF

Transcript Sequence

Transcript ID

VIT_01s0011g04400.t01
Transcript Infomation

cdna chromosome:12X:1:4004109:4010867:-1 gene:VIT_01s0011g04400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Origin of replication complex subunit 4 [Source:UniProtKB/TrEMBL;Acc:F6HFL3]
Sequence

ATGAAAGGGCGAGAAAATCCAGCAGAGGATGCCTTAATTCTTCTCAGAAGTAGAATTTGT
AACCCTAATTTCGTCTTCACACCATTTTCCGATTCACCCGACAGCAATTACAGCAAGTTG
AAATTCATTATATCAAGCTCAGTGACCGAGGCATGTAACAATTCAATCCTTCTTCTTGGT
CCTCGTGGTTCTGGAAAAACGGCGGTGTTGGAGCTTGTTATCAGAGATCTATTGGCAGAA
CATGCTGATATGATATCAGTGATCAGATTGAATGGGCTTTTGCACAGTGATGACAATTGT
GCAGTCAAGGAAATTGCTAGACAATTGTGTGTGGAGCATCAGTTGTTGTTCTCAAAAATG
GCATCATTTGACGATAATTCCCAGTTCATGATAGCTATGTTACGGGAGTGTGGATTAGCT
CACAAGACAATCATTTTTGTATTGGATGAGTTTGACTTCTTCACTCAGGCAAGATTACCT
CTCTCTCATGGGAAACAACGATTACTTTATAGCTTGTTGGATGCAATGCAATCTGTGACG
TCACAAGCAGTTGTCATTGGTGTCAGTTGCAGACTAGATGCAGATCAACTCTTGGAAAAA
AGAGTAAGATCTCGTTTTTCACATAGAAAGGTGTTGTTTCTTCCACCCTCAAAGGAAGAT
CTACAAAGATTGTTAGAGCACATTTTTTCTTTGCCAGTAGACACGAGCCTTCCAAATGAC
TATGCTGTTGAGTTCAATATGAAACTCCATCATATATTGGCAGATGAGAGATTTAAAGAA
ATCATTAATACCTTGTTGAATTCTGATTCCACTGTCAAACATTTGTTGAGGTTTCTATTT
TATGCTGTTTGTCATATGGATTTGGAATCTGGGTTCCTGTCACTTGATAACTTCAGAACA
GCAATGTCAAGCATCCAAAGGCAGCCAAAGATGGAATATTTACAAGATTGCTCCATTTTG
GAACTCTATATTTTGGTGTGCATGAAGAGGTTGGAAGTCAAAGAGCAAAACTCATACAAT
TTCAATTCTGTAATGAAAGAATACAAAGGCATACATGATGCATACCAGACATCCGATTAT
TATGCACGGAATGTATGCTTACGGGCTTTTGAACACCTTGTACAACGTGAATTAATCTGT
TTTATGGATAATAGGGGAAACAATCAATCTATAGAATTTCGTGCAGTGAAGCTACTAATC
TCATCACATGAACTCTATCAGGGATTGAAATCATATCGCTCTTGTCCTTGTGTGAGTCAT
TCTGCGGAAGCTGGTGGACCAATGAAAGTTATAGATGGCCGGTCAGCTTTGTGGGTATCA
GAGGAGAAGGTGAAGGTTGCTGTTTGTAGTAATTTCTTCTGGATGTTTTAACCTGCATCT
TTAGGTGGAGGAGAAAAGAGATTATAAGAGCTTTTCCAGCTGAGTGGGTAGCCTTGTGAG
GACACTTCCA